Os01g0954900

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0954900| Description = Similar to Nucleoid DNA-binding-like protein| Version = NM_001051969.1 GI:115442308 GeneID:4325406| Length = 1591 bp...")
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Gene Name

Os01g0954900

Description

Similar to Nucleoid DNA-binding-like protein

Version

NM_001051969.1 GI:115442308 GeneID:4325406

Length

1591 bp

Definition

Oryza sativa Japonica Group Os01g0954900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43853841..43855431

Sequence Coding Region

43854042..43855379

Expression

GEO Profiles:Os01g0954900

Genome Context

<gbrowseImage1> name=NC_008394:43853841..43855431 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43853841..43855431 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcactccttgcattaccactcctagccttcttgtccatattcttgactcctacaacggcagtgagcagctcaacgctgcagctggcacgttctcactcggtgacgcccaatgccggggcgccgctcagcgcgtgggccgcgtccgtagccgcccagtcggcggcggacacggcgcgcatcgtcagcatgctcacgtcgggggcggggcctctgacgaccagagccaagcccaaacccaagaacagggcaaacccacccgtgccgatcgcgccggggcgtcagatcctcagcatcccgaactacatcgcccgcgcgggcctcggcacgccggcgcagacgctcctcgtggccatcgaccccagcaacgacgcggcgtgggtgccatgcagcgcctgcgccggctgcgccgcctcgtcgccgtccttctccccgacgcagtcgtccacgtaccgcaccgtgccctgcggctcgccgcagtgcgcgcaggtgcccagcccgtcctgccccgcgggcgtcggctcctcctgcgggttcaacctcacctacgcggcgtccacgttccaggccgtgctcgggcaggactcgctggccctcgagaacaacgtcgtcgtgtcgtacaccttcgggtgcctccgtgtcgtcagcggcaactccgtgccgccgcaggggctcatcggcttcggccgcgggccgctctccttcttgtcgcagaccaaggacacgtacggctccgtgttctcctactgcctcccgaactacaggtcgtctaacttctccggcacactaaagctcggccccatcgggcaacccaagaggatcaagacgacgccgttgctctacaaccctcatcgcccttcactctactacgtcaacatgatcgggatccgcgtcggcagcaaggtcgtgcaagtcccgcaatccgcgctcgcgttcaacccggtcacgggcagcggcaccatcatcgacgccgggacaatgttcacgcggcttgccgccccggtgtacgccgccgtgcgcgacgcgttccggggcagggtgcgcacgccggtggcgccgccgctgggcgggttcgacacgtgctacaacgtgaccgtctcggtgcctaccgtcacgttcatgttcgccggggcggtcgccgtgacgctgccggaggagaacgtgatgatccacagctcgtcgggcggcgtcgcgtgcctggcgatggccgcggggccctcggacggcgtgaacgcggcgctcaatgtgctggccagcatgcagcagcagaaccaacgcgtgctgttcgacgtcgccaacggccgcgtcggcttctcccgtgagctttgcacggcctga</cdnaseq>

Protein Sequence

<aaseq>MSLLALPLLAFLSIFLTPTTAVSSSTLQLARSHSVTPNAGAPLS AWAASVAAQSAADTARIVSMLTSGAGPLTTRAKPKPKNRANPPVPIAPGRQILSIPNY IARAGLGTPAQTLLVAIDPSNDAAWVPCSACAGCAASSPSFSPTQSSTYRTVPCGSPQ CAQVPSPSCPAGVGSSCGFNLTYAASTFQAVLGQDSLALENNVVVSYTFGCLRVVSGN SVPPQGLIGFGRGPLSFLSQTKDTYGSVFSYCLPNYRSSNFSGTLKLGPIGQPKRIKT TPLLYNPHRPSLYYVNMIGIRVGSKVVQVPQSALAFNPVTGSGTIIDAGTMFTRLAAP VYAAVRDAFRGRVRTPVAPPLGGFDTCYNVTVSVPTVTFMFAGAVAVTLPEENVMIHS SSGGVACLAMAAGPSDGVNAALNVLASMQQQNQRVLFDVANGRVGFSRELCTA</aaseq>

Gene Sequence

<dnaseqindica>53..1390#atcacactagcttgacacgccctcaatttctcacaccagaagcaaagcaatcatgtcactccttgcattaccactcctagccttcttgtccatattcttgactcctacaacggcagtgagcagctcaacgctgcagctggcacgttctcactcggtgacgcccaatgccggggcgccgctcagcgcgtgggccgcgtccgtagccgcccagtcggcggcggacacggcgcgcatcgtcagcatgctcacgtcgggggcggggcctctgacgaccagagccaagcccaaacccaagaacagggcaaacccacccgtgccgatcgcgccggggcgtcagatcctcagcatcccgaactacatcgcccgcgcgggcctcggcacgccggcgcagacgctcctcgtggccatcgaccccagcaacgacgcggcgtgggtgccatgcagcgcctgcgccggctgcgccgcctcgtcgccgtccttctccccgacgcagtcgtccacgtaccgcaccgtgccctgcggctcgccgcagtgcgcgcaggtgcccagcccgtcctgccccgcgggcgtcggctcctcctgcgggttcaacctcacctacgcggcgtccacgttccaggccgtgctcgggcaggactcgctggccctcgagaacaacgtcgtcgtgtcgtacaccttcgggtgcctccgtgtcgtcagcggcaactccgtgccgccgcaggggctcatcggcttcggccgcgggccgctctccttcttgtcgcagaccaaggacacgtacggctccgtgttctcctactgcctcccgaactacaggtcgtctaacttctccggcacactaaagctcggccccatcgggcaacccaagaggatcaagacgacgccgttgctctacaaccctcatcgcccttcactctactacgtcaacatgatcgggatccgcgtcggcagcaaggtcgtgcaagtcccgcaatccgcgctcgcgttcaacccggtcacgggcagcggcaccatcatcgacgccgggacaatgttcacgcggcttgccgccccggtgtacgccgccgtgcgcgacgcgttccggggcagggtgcgcacgccggtggcgccgccgctgggcgggttcgacacgtgctacaacgtgaccgtctcggtgcctaccgtcacgttcatgttcgccggggcggtcgccgtgacgctgccggaggagaacgtgatgatccacagctcgtcgggcggcgtcgcgtgcctggcgatggccgcggggccctcggacggcgtgaacgcggcgctcaatgtgctggccagcatgcagcagcagaaccaacgcgtgctgttcgacgtcgccaacggccgcgtcggcttctcccgtgagctttgcacggcctgatcgatcactgtgcgaattgcgtaattgtattgtacgtacgtactagcttggccgtcaggcgttcgacttttggcttaccattcatgagctcatgccacagttcatctagtatgttatttttaaacgctgagttagtaaataaggattgtaataggtgatttcgtgtgggttaaatcaattatgtagcatatgtgatactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0954900, RefSeq:Os01g0954900