Os01g0955000

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0955000| Description = Phosphoesterase family protein| Version = NM_001051970.1 GI:115442310 GeneID:4325407| Length = 4524 bp| Definition ...")
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Gene Name

Os01g0955000

Description

Phosphoesterase family protein

Version

NM_001051970.1 GI:115442310 GeneID:4325407

Length

4524 bp

Definition

Oryza sativa Japonica Group Os01g0955000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43858108..43862631

Sequence Coding Region

43858336..43858643,43858751..43858930,43859048..43859565,43861995..43862551

Expression

GEO Profiles:Os01g0955000

Genome Context

<gbrowseImage1> name=NC_008394:43858108..43862631 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43858108..43862631 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggttcgccgccggcgacccggccccgtggcggccgccgtgctgctgctactcgcggtggcgacccaggcggcggcgagcccgataaagacggtggtggtggtggtgatggagaaccggtcgttcgaccacatgctggggtggatgaagcggctgaacccggagatcgacggcgtgaccggcggcgagtggaacccgacgaacgccagcgacccgtcgtcggggcgcgtctacttcggcgagggcgccgagtacgtggacccagacccgggccactcgttccaggagatccggcagcagatattcgggtcggacgacgcgtcggggccggcgaggatggacggcttcgtgcagcaggcgcggtcgctgggggacaacatgacggcggccgtcatgaacggcttctcgccggacagcgtcgccgtgtaccgggagctcgtcggggagttcgcggtgttcgaccggtggttcgcgtccgtgccgtcgtcgacgcagcccaaccgactgttcgtgcactccgccacatccggcggcgccaccagcaacaacccagagctgctggcgaagggctacccgcagcgtacaatcttcgacaacgtgcacgacgccgggctgtcgttcggggtctactaccaggacgtgccggcggtgctcttctaccgcaacctgcggaagctcaagtacctgaccaagttccacccgttccacggcgcgttccgcgaccacgccgcccgcggctccctcccaaactacgccgtggtggagcagcactacatggactccaagtcccacccggccaacgacgaccacccgtcgcacgacgtcttccagggccagatgctcgtcaaggaggtgtacgagacgctccgcgccagcccgcagtggaaccagacgctcatggtcgtcacctacgacgagcacggcggcttctacgaccatgtccccacccccgtcaccggcgtccccagccccgacggcatcgtcggcccgccgccgtataacttcgcctttgatcgcctcggcgtccgtgtcccagccatcgtcatctccccctggatcaacaagggtacagttgttcatgggccaaacgggagcccaaccgcgacgtcggagtacgagcactcgtccatccccgcgaccgtgaagaaactcttcgatctgccacaggatttcctgactaaaagggacgcctgggctggaacgtttgagagtgtcgtgcaaggcagaactgagccaaggacggattgcccagagcaactcccaatgccgatgaggatacggctgacggaggcgaacgaggaggcgaagctgagtgagttccagcaggagctggttcagctggcgtcggtgctcaacggggaccaccagctgagcagcctgcaggacacgatcagggacaggatgaacgtcagggaaggcatcgcgtacatgcggggcgctgtaaagcgcttcttcgagaccggcatgtcagccaagaggatgggcgtcgacgacgagcagatcgtcaagatgaggccatcgctcaccaccaggacatcccctgcgatcgagcaaccatag</cdnaseq>

Protein Sequence

<aaseq>MAVRRRRPGPVAAAVLLLLAVATQAAASPIKTVVVVVMENRSFD HMLGWMKRLNPEIDGVTGGEWNPTNASDPSSGRVYFGEGAEYVDPDPGHSFQEIRQQI FGSDDASGPARMDGFVQQARSLGDNMTAAVMNGFSPDSVAVYRELVGEFAVFDRWFAS VPSSTQPNRLFVHSATSGGATSNNPELLAKGYPQRTIFDNVHDAGLSFGVYYQDVPAV LFYRNLRKLKYLTKFHPFHGAFRDHAARGSLPNYAVVEQHYMDSKSHPANDDHPSHDV FQGQMLVKEVYETLRASPQWNQTLMVVTYDEHGGFYDHVPTPVTGVPSPDGIVGPPPY NFAFDRLGVRVPAIVISPWINKGTVVHGPNGSPTATSEYEHSSIPATVKKLFDLPQDF LTKRDAWAGTFESVVQGRTEPRTDCPEQLPMPMRIRLTEANEEAKLSEFQQELVQLAS VLNGDHQLSSLQDTIRDRMNVREGIAYMRGAVKRFFETGMSAKRMGVDDEQIVKMRPS LTTRTSPAIEQP</aaseq>

Gene Sequence

<dnaseqindica>3989..4296#3702..3881#3067..3584#81..637#gggtccatcacgagctcccctccccacacaccacctcactcccactacgagagaggaggaagctcgcaatcatcgaatcaatggcggttcgccgccggcgacccggccccgtggcggccgccgtgctgctgctactcgcggtggcgacccaggcggcggcgagcccgataaagacggtggtggtggtggtgatggagaaccggtcgttcgaccacatgctggggtggatgaagcggctgaacccggagatcgacggcgtgaccggcggcgagtggaacccgacgaacgccagcgacccgtcgtcggggcgcgtctacttcggcgagggcgccgagtacgtggacccagacccgggccactcgttccaggagatccggcagcagatattcgggtcggacgacgcgtcggggccggcgaggatggacggcttcgtgcagcaggcgcggtcgctgggggacaacatgacggcggccgtcatgaacggcttctcgccggacagcgtcgccgtgtaccgggagctcgtcggggagttcgcggtgttcgaccggtggttcgcgtccgtgccgtcgtcgacgcagcccaaccgactgttcgtgcactccgccacatccggcggcgccaccagcaacaacccagagtacgtgcattattattaaccttctcctactatttccgcgtgatatcgcttttgatgattcgatatctatctttgggctggccgcgacaaatgcgttctgattcgatcgatatatcgtttgcgtgtggacgtacgtgatcgaattccaaccatcgtagtatagttatttcaatctgctgggtttggtggccaaaattattgatgatggatcaatggtgttcagactcgagatgagctgttgttgcacttgcacactaggatacgcacaaactaaatgcggccgtagtagttaaaagagttgcattttgaaccaaacagatgccatcttttgcttaatctgttcaattttggatagtggtgatagttatttttccttttagccatagtactgatagttctgctagcataattaaccttgtagaatctgaactgcggttgtacgtacaatatactgtgggtagtatctgaattttgaaatatatatactgcgggtagtatctgaagtactcactaagttcaggtatcagttgtcaactagcggtcaaattgcacccttttttttttcaaagtcacgtggcgattttacgcctgcgcctctacacgcaattaaggggattctctgctgcaagcacaagctagcttcttctgctgacgtacagtagaaacattgctagagttctctctgtcttgttcctttccattcaaaagtacactaggatatcagagtcacacagagcagtcactgtatgtaccatttttgggcggtgctttgtgcttccctgtacaaaatctgaaagagaaagattgtactaggcagaaagccgacctaccaataccatagtaaagtttaaattcttgtggtcgctcaacgttctagcttgcacctgccatgcacaaagatgatggcgcccaaatggccaaatcattttttcaatatgacaatgaatccatttgatgcccgaggtgacctaatcaacttgggttagccgaacgattcatcaaaaggagcaagtttgtcaggatcgggatactagttagtatcgttttgctcaaagtaatatcgtatcgtatgatcgggatactataagattttcttttttaagtttaattaatatttatattaaatatatatagccattctgtataaaaaaatatagtaatgatatatatcatgcaaatagagacatttatcaagagaaaccacgttggttttgatatatttaactgatttttatataaatttgagcatatttaggtacattatttttaaaccatgttatttaaaataatattttgtagtatcgtagggatcgtagaatcgggataccacctaagatttcgtaggatcgtgtagtaatgaatagtaggatcgagatactatgaaaattaagatactaggtgggatcgatatcgtttcggcttggtataggattgtagtatcgtaagatactaggatacgaatcgggatattgacaacattgaaaaggagcatcacatgccctgcaactgcaagagcactaacatcgattagtctcctgtcggcatcatcaagatagaacgatgccaattatgccactatcagcaccaggatttgtttggaaaagaaactcattatgccatccacttgtcattagacaggagtactacggtactaagttaaaaaaaacaatagcactagcacggatttcaaatcggggtatatatgtcgcgggcagcctttgattagttaattttcttatgggccgtgcgttgttgattaattccctgcttttgcccttcgcttttgctgtcgcgtgctccagaccatcgatcaggttaacgcattacggtgaacatggattaaattagtcactaagacatcgatggctggatccaccgtccatgtgaaagcagtcgagggaaaggaggcacgcaacgtcgagagaatggtggtcccctttcgatccatggctgactgacactgctcatcgtctcgctactaaccatgggtacagtttgaatggccccacctgacagtgaaatagattttagtgacaagcaccggatcggatcagaaatacgtgtcaggaggcaagacacacacctggcctgctggcccatgatcggaaacccttaaaaaaacaagtgaatggtacagtaatgtattgcggtgacagcgccaaccacgacttgtgtcggtgcgtggggtctggtgagtcgtaagaaaccgagaagattcctggattccaccgagttcatgccgtgtcaagaaaaaaaaataaattaagaactgggctacgaattagtagtgcctaatgggctacgaacttaagagaagaaagaacagtttgggccggtacatggattcggcccaattcgggcacttcagtttttgatgatcgatcaaactaataaaaacttggttggcgtgtgtgtttttggtcgtgcaggctgctggcgaagggctacccgcagcgtacaatcttcgacaacgtgcacgacgccgggctgtcgttcggggtctactaccaggacgtgccggcggtgctcttctaccgcaacctgcggaagctcaagtacctgaccaagttccacccgttccacggcgcgttccgcgaccacgccgcccgcggctccctcccaaactacgccgtggtggagcagcactacatggactccaagtcccacccggccaacgacgaccacccgtcgcacgacgtcttccagggccagatgctcgtcaaggaggtgtacgagacgctccgcgccagcccgcagtggaaccagacgctcatggtcgtcacctacgacgagcacggcggcttctacgaccatgtccccacccccgtcaccggcgtccccagccccgacggcatcgtcggcccgccgccgtataacttcgcctttgatcgcctcggcgtccgtgtcccagccatcgtcatctccccctggatcaacaagggtacaggtcagtgatgagtagtaacgactatttttgctgttactgtgcctaactaagctttgactgcgtgcctgcttaattagtgtgttttgaactgacaattgttgtgttgatatttttcagttgttcatgggccaaacgggagcccaaccgcgacgtcggagtacgagcactcgtccatccccgcgaccgtgaagaaactcttcgatctgccacaggatttcctgactaaaagggacgcctgggctggaacgtttgagagtgtcgtgcaaggcagaactgagccaaggacggattgcccaggtaagacggccatgttcagttgcgtactgcgaatgtatgtaatgtagtaatagtcttcagaagttgttcacttggcactgcctttttatccttgatgcaaaatgcagagcaactcccaatgccgatgaggatacggctgacggaggcgaacgaggaggcgaagctgagtgagttccagcaggagctggttcagctggcgtcggtgctcaacggggaccaccagctgagcagcctgcaggacacgatcagggacaggatgaacgtcagggaaggcatcgcgtacatgcggggcgctgtaaagcgcttcttcgagaccggcatgtcagccaagaggatgggcgtcgacgacgagcagatcgtcaagatgaggccatcgctcaccaccaggacatcccctgcgatcgagcaaccatagaaatagaaacaagagcaatagaagcaaataaggatacaggtttattttatatgctgaaaaagaaaaaaaatcatggtgcttgcatatatgtagcagagccagcaaggagtgctttgttctagaattagttgagatctctcatggatcgatctatatacatggccgggctgtactgtacaaattgatgaaacgttaattattggcttagtatacagatcgatcgattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0955000, RefSeq:Os01g0955000