Os01g0957000

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0957000| Description = ATP-NAD/AcoX kinase family protein| Version = NM_001051979.1 GI:115442328 GeneID:4325416| Length = 5889 bp| Definit...")
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Gene Name

Os01g0957000

Description

ATP-NAD/AcoX kinase family protein

Version

NM_001051979.1 GI:115442328 GeneID:4325416

Length

5889 bp

Definition

Oryza sativa Japonica Group Os01g0957000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:43972682..43978570

Sequence Coding Region

43972870..43972896,43974418..43974607,43974738..43974857,43974936..43975228,43975360..43975454
,43975563..43975669,43976310..43976383,43976856..43976934,43977147..43977454
,43977840..43978145

Expression

GEO Profiles:Os01g0957000

Genome Context

<gbrowseImage1> name=NC_008394:43972682..43978570 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:43972682..43978570 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgctcgacgagcttccgcacaaggtttctgatgagagagtaaaccatgatactgtgacctcacatgaaagtgaaattgggtctgggtccatctccacagttagctcaacagttagttcagtagaatcagagaaagcagcttatgaattccttgctcaaactcctatcaagtcaaccgatgcacaccttgttgagttttcagaagctatgagaactgttgcaaaagcattgcgacgagttgcagaagggaaagctgctgctcaagctgaggcggaagagtggaggcgtaaatatgaattagagatggcacacaaacagcagagaaaaatcaaaggctatggcagttgtgccaataatgaattagaaaagttggccagccaactaacactggagacgcctgcatctgatcaagcgggatgttgtggaaatcatggtatatgttcacatgaggttcttcaggatgaaagtcctggtcctaacccccgatctagtcacaagctggtgagtagaaaggcatcatttagactttcatggggatgcaatggggataaaaacggccagcacaagcatgattttgtatcatttgaaaagggagatataacaacagcagagcgcagcaacaagcagattttgctgaaatgggaatcctcgccacaaactgttcttttcataaccaaacctaattctaactccgtgcatgttctttgtgctgaaatggtcagatggcttaaggaacataaaaagataaatgttgttgtagagccacgtgttagcaaggaactcttaacagaagattcctactacaatttcatccaaacatgggatgatgatgaggagaaaaagatgttgcacacaaaggttgatctcattgtaactcttggtggtgatgggactgttttatgggctgcgtctttgttcaaagggccagttcctccggttgttgctttctccctaggatcactgggattcatgacacctttcccaagtgagcaatatcgtgattgtctggacaatgtgctgaatggaccatttagcatcacattgagaaaccgtctacagtgccatgtaatccgtgatgcagcaaaggatgaacttgagactgaggagccaattttagtgttaaacgaagtcacaattgaccgtggaatatcatcttaccttacctacttggaatgctactgtgatagttctttcgttacatgtgtacaaggggatggactgatcatatcaacaacatctggaagcacggcatattcattggcagctggaggatccatggttcatccacaggtcccaggaatcctattcacgccgatctgcccgcattccctgtcattcaggcctttgatactgcctgaatatgtgaccctgcgcgtacaagtgccacataacagcaggggccaagcttgggcatcattcgatggcaaagatcggaagctgctgtcacccggggatgctctcatctgcagcatttctccatggcctgtgcccacggcttgcctggtggattcaacaaccgatttcctacgcagcatccacgagggtctccactggaacctgaggaagtcccagtcattcgacggcccgcgtgattga</cdnaseq>

Protein Sequence

<aaseq>MSLDELPHKVSDERVNHDTVTSHESEIGSGSISTVSSTVSSVES EKAAYEFLAQTPIKSTDAHLVEFSEAMRTVAKALRRVAEGKAAAQAEAEEWRRKYELE MAHKQQRKIKGYGSCANNELEKLASQLTLETPASDQAGCCGNHGICSHEVLQDESPGP NPRSSHKLVSRKASFRLSWGCNGDKNGQHKHDFVSFEKGDITTAERSNKQILLKWESS PQTVLFITKPNSNSVHVLCAEMVRWLKEHKKINVVVEPRVSKELLTEDSYYNFIQTWD DDEEKKMLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFPSEQYR DCLDNVLNGPFSITLRNRLQCHVIRDAAKDELETEEPILVLNEVTIDRGISSYLTYLE CYCDSSFVTCVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPL ILPEYVTLRVQVPHNSRGQAWASFDGKDRKLLSPGDALICSISPWPVPTACLVDSTTD FLRSIHEGLHWNLRKSQSFDGPRD</aaseq>

Gene Sequence

<dnaseqindica>189..215#1737..1926#2057..2176#2255..2547#2679..2773#2882..2988#3629..3702#4175..4253#4466..4773#5159..5464#gtggtgctcctcctcctcaacagcgtcgcctcgcgtcggcgtcgcctctcaccacccaaccaccagtccaccacccacctctctccctcccctcccctccccaaacccaacccgagccgaggccggaatttcctttttggtgcgacgacgacgaggtgagggtgagccaaccgccggatcgcgccgccatgtcgctcgacgagcttccgcacaaggtaaccgcgggttttggcaatctgcgtggctgcggcttcgaattgagcatttcggggagggtggttctgaaatctgtttttggggttcgctgatgggtggtttggtttctctctgtgtgccagaagctggcatcctcggagggaattcggttcgcgcggtcggattccaggttccggagccttagcccagcgcccatcccaatcccaactgccccaagcttcagatcattggtcgacccggtacgtgcgtgctctcgattgggtactggattatcgcaaggatgcgtgtccatttccatcacgtctcgtagtcatcttctttgctatcgcttgcttagcattaggggagtctgtactgtgtggtattgtccttagaagtcatgctactttcacaaaaacaatgtgtttcacaatgttccattgctctgcctcatcattggcaagcttgaagaccagaggtcatgagctcgtgtcccccccatttttgtgggggaagacttggccatagactttcgcattgtaaggcacgttgtgttgagtccaactctgtcttttttattatttgggagggagagggggagggggagggggagggggaggggagaccactacggtcctaccttttcgttgatttttttaaaagcaagttgtgaaaattgtacaagataaaaatagaaaaagaggagcacgcaggcgcaaggagagagcttgcgcacacaagcacaaaacgaattcagattttctttttgggtggtcatgtagagcctctgcacccttattgtgcattcttctttattttgttttgacccgttttcctagaattcaatggttggtttccaggcattgggcatgagttctcgtgggagccatgcaaacattgtgagaaaatttccaaataggtcataaaacggataaaaatgcttgggcctaaactcacagtttttagcaagcctaatcctttaggaatttccatatttgaaattggacgattttggagagtaccattatgtagtcttgtaatccctctgtttcatatcataaggtgctttgattttttcctagtcaaactttgaccaagtttatagaaaaaaatagtcacatataaaacagcaaactagtttcattaaatctaacattgaatatattttgataatatgtttgttttgtgttgaaaatactaccatatttttctataaacttggttaaacttaacgaagtttgactaggaaaacagtcaaagcgacttataatatgaaatgtggggagtaattgcgtattggacatcaaatttgaagttactgttactggatcatgtacttgattgtatgggactatgggtcgaattttaatgtaatgttcgagtttaaaatttctagttagcgtcaaaataagcccaacaaagagttaagggatggtttatttctcaggttaagtttaaagcttagtccattgctccatttgaaaatctgaagccagttgggatagactatagagcttattaccagttcctttgcattgcaggtttctgatgagagagtaaaccatgatactgtgacctcacatgaaagtgaaattgggtctgggtccatctccacagttagctcaacagttagttcagtagaatcagagaaagcagcttatgaattccttgctcaaactcctatcaagtcaaccgatgcacaccttgttgagttttcagaagctatgagaagtaaggagacaaaagctttacatggcactaccaaattcctgattatctacagttatatatacctttcagtcctttcacttgcattcaaaaaacaaaatattgataaatatagtttatttttaaactgaagctgttgcaaaagcattgcgacgagttgcagaagggaaagctgctgctcaagctgaggcggaagagtggaggcgtaaatatgaattagagatggcacacaaacagcagagaaaaatcaaaggttagttttgtatacattcgtagttgctattccaggagctatctccaaaaatctaaattggaattctaccttgtgcaggctatggcagttgtgccaataatgaattagaaaagttggccagccaactaacactggagacgcctgcatctgatcaagcgggatgttgtggaaatcatggtatatgttcacatgaggttcttcaggatgaaagtcctggtcctaacccccgatctagtcacaagctggtgagtagaaaggcatcatttagactttcatggggatgcaatggggataaaaacggccagcacaagcatgattttgtatcatttgaaaagggagatataacaacagcagagcgcagcaacaagcaggttagtcctcctgtgctggaacagtcaagaatattattctaattatttcactccagtagctggaataactagaccaatgaatcgtctcttatgcacatctatttctgttacaacgattttttttatttcagattttgctgaaatgggaatcctcgccacaaactgttcttttcataaccaaacctaattctaactccgtgcatgttctttgtgctgaaatggtcaggtgtgttctttgatttttatattttaaatgccctaaatatctgacagatgcatgcacgttttaagtattgtgtttgcactgctaaatgtactatttatttttctgcagatggcttaaggaacataaaaagataaatgttgttgtagagccacgtgttagcaaggaactcttaacagaagattcctactacaatttcatccaaacatgggatgatggtaaggcatttctattgatttaatacattagtttcatgctgattcatattttttcttttgaaatacttcatatgcttaagagaaaaaaaaatggtgtttcagttatgaaccctttccttgtcattgatattctgaaaaatgaaagaactttcatgataactaaattagttgattactgccgaaatggcatgggtatatagtacgggcatgcttttgctttactttatcacccttatgtatcctatcttgttttacatgggggcaaaatttacaatgagaactgaattagttgattactgcttgaattcgagatgtttattacctatgtctagatttttatgaaatcatccaatcacatctcaataaagatttcggtaaaaatccccttctactgcttgaatttgtgatgtttattacctctgtatggaattttctgaaatattccaatcacatcccaataaagtaatatccttgtactagatgtcggtacaaatcattcttggcattgaattggatacacattataaagttgtattttgtatcaaatgggaagattagacatcttgtttgagtaaagtagttctattcattcacctagcactctcccttatctgtgcaactaattagataattctgatagatgaggagaaaaagatgttgcacacaaaggttgatctcattgtaactcttggtggtgatgggactgttttatgggtaagtaaattcaattctttgtctagagttctgcctcaaccactgtatcttttgatcgaatcagaccaactagaggattaacctttttttttttccaaaggtccatatatttagtcaataatcaatattgcttagtttaatggcatatgtggggtagaattggctgacagctgaaatggaaggtctgtcggtgcctgcagcataagttatcatgagaattgcttcttcacagttaggcagagttcttttctgattctgacctatcaaaatcaaaagttggaaggttctagtacaaattagctatcaaaaccaacttacctgatatttattgctttgttcttccatatttaggcgactgattattcctgcatttgaaactataattgcttctcaatttgtactagttactagtttttgtacattgctctgctgggctgacatttaaatacatggtgaatcaatctcttaacaggctgcgtctttgttcaaagggccagttcctccggttgttgctttctccctaggatcactgggattcatgacacctttccgtatccttttattatggatgttgactgctttctcgatatcgttttgtgtagtgactggttcttactgttttgctatccaatctacatttttagtaagtttggatttggtctaaaagaaacctgcttgttagacgataaatctcacatgaagctccctgctctcctgttaacatttgtgttatccatgttgtcctccttaacatgcttttcagcaagtgagcaatatcgtgattgtctggacaatgtgctgaatggaccatttagcatcacattgagaaaccgtctacagtgccatgtaatccgtgatgcagcaaaggatgaacttgagactgaggagccaattttagtgttaaacgaagtcacaattgaccgtggaatatcatcttaccttacctacttggaatgctactgtgatagttctttcgttacatgtgtacaaggggatggactgatcatatcaacaacatctggaagcacggcatattcattggcagctggaggatccatggttcatccacaggtatgccctacatcgcatgatacatccttagcacttgagtatttactgattaattttattggattatcttcttgggcatttcctaatcacacccccttagatttctgcaataaatcgtgaagcttttttccccttggttctaaaattgtgtaatgtggttcagaagtttagataagttgcactgaacaccagaatctgatctgtttcacaaacataggctaccctgtactacctgtaattcttgtagcaaattagcaatgtctataaattaaccttttgaggcctagttacaatcatgaaatgttgctatttcctttgtccagctgctcaacataacttgtcgactctattttggtggtctcaaatgttgtgctggtatatgcaggtcccaggaatcctattcacgccgatctgcccgcattccctgtcattcaggcctttgatactgcctgaatatgtgaccctgcgcgtacaagtgccacataacagcaggggccaagcttgggcatcattcgatggcaaagatcggaagctgctgtcacccggggatgctctcatctgcagcatttctccatggcctgtgcccacggcttgcctggtggattcaacaaccgatttcctacgcagcatccacgagggtctccactggaacctgaggaagtcccagtcattcgacggcccgcgtgattgatcccagctcctggatacagtccagtgtcagagttgagagtttcagctggccatcagaagagtttcccacgagtccagctaacaccgagcggataaatgtacctagcagagtttgttgcttgttaccattccatatacatatacatatacatatacatatactagaaggctgctgcgtgtagatttggggtaagtactggggactgaagaatgaatcgaaatagaaagtatcgagaatacactgtgccatgatgaatgtataacagtagatgtggcaggcaacatatactgatgtgcactagcatctgaagtagcatgggagagtagataccggtgacaagtcatcgaagtgtaaaaacacaacatgtatactggtatatatatgtacccccatgatctgaatgaaataatttgaccatggaaagg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0957000, RefSeq:Os01g0957000