Os01g0962400

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Revision as of 05:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0962400| Description = Protein of unknown function UPF0185 family protein| Version = NM_001052013.1 GI:115442396 GeneID:4324551| Length = 1...")
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Gene Name

Os01g0962400

Description

Protein of unknown function UPF0185 family protein

Version

NM_001052013.1 GI:115442396 GeneID:4324551

Length

1969 bp

Definition

Oryza sativa Japonica Group Os01g0962400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44214254..44216222

Sequence Coding Region

44214395..44214474,44214964..44214996,44215764..44215861,44215987..44216084

Expression

GEO Profiles:Os01g0962400

Genome Context

<gbrowseImage1> name=NC_008394:44214254..44216222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44214254..44216222 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcgggcggcggcggcgcgggggcggccggaggcgggaaggtgtcgttcaagatcatcctcacctccgaccccaagctccccttcaaagtgtttagcgtgcccgaggcggcgccgttcaccgcggtgctcaagttcgccgccgaggagttcaaggtcccgccccagaccagcgccatcatcaccaacgatggagttggcatcaacccacagcaaagtgcaggcaatgtgtttctaaagcatggctcagagttgcgcctcattccccgcgatagagttggagcattggctgcgcctttctag</cdnaseq>

Protein Sequence

<aaseq>MAAAGGGGAGAAGGGKVSFKIILTSDPKLPFKVFSVPEAAPFTA VLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGALAAPF </aaseq>

Gene Sequence

<dnaseqindica>1749..1828#1227..1259#362..459#139..236#aaactcgcgaatcctcttttcccagaagaagaaaaaagaagggctgcgactcattcgaaccgcgcatctcgtctcgtcgaagcgagcgaaaccacacgcggcgcgtcgatcccaacaccaccaacgcaacccctacccatggcggcggcgggcggcggcggcgcgggggcggccggaggcgggaaggtgtcgttcaagatcatcctcacctccgaccccaagctccccttcaaagtgtgagtagcagcacccccgcgatctcagatcagatctctctctcgctctcgattgataggggtgtttgcggtggccgtctctgcttgttctgatctgcggggttggtttgccctgtctcctgcaggtttagcgtgcccgaggcggcgccgttcaccgcggtgctcaagttcgccgccgaggagttcaaggtcccgccccagaccagcgccatcatcaccaacggtgagtccgtgttcgcgtgttccccctccgttccgtgctgcggcctctgtcatgagttttctctcgtttcgccgaaccataatttttgtttccgctaccgcgattgggaagaggatctatgtctcgatgttatgttctgttgcctggtgatttgatgcgtcgcgcaatgataattcatagcttttctgggctgcttctcatgaatcgagtctgctaagtatatggtctagtgattggaagggaaaattggtgtggaattcagttcgaaatttaggttcgttcaaacctgcattcaatattcattactacatgatatttgatttaaacatacagtatgccatgttgaacttcaatgccaaggattgcatctctagtaaaaaggtgtactgatttattggtgctgtgtcaatctgatttgggggttccaagagtgacttgatgatttgtgtggaaggcttgcaccattagtgatgtatggacggctgccaatggcaatgttgcagcttgtaattttctcattgccctaatagatttctcttgttggttgcatttactttgcaagttgtaatttagacgatacatttatgctgtgttatactacagtgattgatggattatccttgaacttattaggctagccatcctcataacatattattgacctgagtgatggatggctgatccttaagccttatggttttctcatagtgaagcagtgattctgaatgccatatattgaaaataatgttgtgtcccttcttttgcagatggagttggcatcaacccacagcaaagtgcaggtacagtttccggattctgttttctactactatgtataaggctatcaattctttaaatttgaaacattattttgttttagagaacaacctgcttcgctgtcccaggctcccagcatagtttagtagactgtagaagattacattgcttattgatgcacttgaattgtccatttgatttgtgctgacattgtagtaactagaattttacagttgtatcagcgcaattgtaaaagaactacttgagtttgatatgggctgtggcacaaagcaaacacaattgcagatactttacccaaacatgcatgtcctttttgctgggttatggatgagcctaaaatgcagtcgtgcagtaatcttatttctcaaattaggtttcagtaacataagaaagatctatcttaagcatatgcagtaccatgaattttttaaacttaagttttacacattctcttttctactcgctgatgtgagctgctttctttcgttcaggcaatgtgtttctaaagcatggctcagagttgcgcctcattccccgcgatagagttggagcattggctgcgcctttctagattctatagttataattgagaaacttaacagaataaagtcgatgttgggtgcttgcttgcttgtataatgtgacaagttgatgataatttatcgacagtttacctggtattttcaacatgtttgccggctgttatatggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0962400, RefSeq:Os01g0962400