Os01g0965400

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Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0965400| Description = Similar to Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase)| Version = NM_001052028.1 G...")
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Gene Name

Os01g0965400

Description

Similar to Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate kinase) (UMP kinase)

Version

NM_001052028.1 GI:115442426 GeneID:4324465

Length

4171 bp

Definition

Oryza sativa Japonica Group Os01g0965400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44357669..44361839

Sequence Coding Region

44357721..44357932,44359140..44359284,44359373..44359426,44359657..44359748,44360318..44360544
,44361158..44361334,44361416..44361564

Expression

GEO Profiles:Os01g0965400

Genome Context

<gbrowseImage1> name=NC_008394:44357669..44361839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44357669..44361839 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgccgccgccgccgccgtcgcctgcggcatgtctacgtccttcctcatccgcctctcgccttcgccgccggcgtcttcccacgtgcctctccctcggtctccggcttcgtcggcgcgcccgcggcgagcgtcttccgtctccctctccaccgcgcctaggccgagggcacgcgccgccggctccgactctccctccaactttggaggtcaaacatcactgatgccaccattcagccttatgcttgatgaaggctctagatctaaaaagccatatagatggcaaagggtgttgcttaaagtaagtggggaggctcttgctggagatcacacagaaaatattgatccaaagatcacgatggcaattgcaagagaggttgcttctgtcaccagactaggtgtagaggttgctattgttgttggtggcggcaatatcttccgcggggcctcttgggctggatgtagtggactcgaccgctcatcagcagattacattggcatgttggctactgtgatgaatgccatatttcttcaagcaacaatggagagcattggaataccaacccgtgtccaaactgcatttcgtatgtcagaagttgcagaaccatacatacgccgaagagctgtcaggcatttagagaaaggaagagttgttatatttgctgctggtacagggaacccattctttacaactgatacagctgctgctcttcgttgtgcagaaatcaatgcagaggtagtacttaaggcaacaaatgttgacggtgtgtacgacgcagaccccaagcgtaacccaaatgcccgccttcttgaggctgtgagctaccatgaggtgcaaacaagagacctctcagtaatggacatgactgccattacgctatgccaagaaaacaacattcctgttgtcgtgtttaatttgcaaaaacctggaaatattgcgaaagctattgttggtgagaaggttggcacgtttataggctgcacaaaagatcaggaccagattgtggggaatgcactggatcaagaaagaagattggtgaacgagttatga</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAAVACGMSTSFLIRLSPSPPASSHVPLPRSPASSARPR RASSVSLSTAPRPRARAAGSDSPSNFGGQTSLMPPFSLMLDEGSRSKKPYRWQRVLLK VSGEALAGDHTENIDPKITMAIAREVASVTRLGVEVAIVVGGGNIFRGASWAGCSGLD RSSADYIGMLATVMNAIFLQATMESIGIPTRVQTAFRMSEVAEPYIRRRAVRHLEKGR VVIFAAGTGNPFFTTDTAAALRCAEINAEVVLKATNVDGVYDADPKRNPNARLLEAVS YHEVQTRDLSVMDMTAITLCQENNIPVVVFNLQKPGNIAKAIVGEKVGTFIGCTKDQD QIVGNALDQERRLVNEL</aaseq>

Gene Sequence

<dnaseqindica>53..264#1472..1616#1705..1758#1989..2080#2650..2876#3490..3666#3748..3896#atcgtcatcatctcgtcccccctcttcccggcgcggcggttgctctccagccatggccgccgccgccgccgccgccgtcgcctgcggcatgtctacgtccttcctcatccgcctctcgccttcgccgccggcgtcttcccacgtgcctctccctcggtctccggcttcgtcggcgcgcccgcggcgagcgtcttccgtctccctctccaccgcgcctaggccgagggcacgcgccgccggctccgactctccctccaactttgggtacgtgattctgcactcggttggctccacggggtgttgttcttcgtggctgcggttgacgtgatgttttgtggtctcccccattgtgtttgtgccaatgcgtggtaacaatggcggagaactcgtatgtctgcgagtagcccccagcttttggccggccgccatcgccctgagacatggtcagcgcgtgcgagatgcgagatatgagaaggagcagtgtcgaccacccgagtcttagccgagcggaggccggaggcctgaagctttgggcggcgagttggccaccgaggttcgtggcggtgtgtgcggcggccgtacggggtggcacaccggcgtgtggaggggagcgaaatactgtaagaaatagaggacgaggcatttccccaaatattgcggtatttgctagattagtgtcttggagttggatgctaaattttgggtaggatatgttcagatatgtcagagaaattacaatagcgctctagcagaatctgtagactagtagcatgattccccttttacagtatcactatggaatggaagaattttctgttaaaattttacttctaaaatctcaatccaagaaatttacataggaattagtcttcagtcttttcttagtgtagttcctattgatgtcctattactttgtgattttttttcctgcgctgcgcgtttaatgttcaataaaatgaattttaatctattgccgatgcaatcttgaatggcgttggcactcaccgcgcctcattttccatacatcctctgccagcgacgacgccgtgccacacatcacaaggattagagattgtaatagatagtaagggtgtcactactgagttaacaaggatgaactagtggctatttagctgttaagtggcccaactaagacaaagacactatcatctctgaaaaaagcggtgtattatatatgagcacctttaaatactattgtgatgtcttcaagtcaaacttaaattatttgtgtgtgcaatacatctgcatggttcatgttcacaaatactaaactatgactgtgacttttccttatattctgttggaattggcagcttgccatcaaaatctgaggtcaattctgtaacaatgtatgttctttcaaattctgtagtagtttctttctgatgttgaatacagtctaattatggagtgagttattcctgataacgcatctccttttatttgacagaggtcaaacatcactgatgccaccattcagccttatgcttgatgaaggctctagatctaaaaagccatatagatggcaaagggtgttgcttaaagtaagtggggaggctcttgctggagatcacacagaaaatattgatccaaaggtgaggttgcttttagtggagcattatcaaatttaaaatactgaatatttgatggaacaggtcatgtaagtgtgtaatgttgttgcagatcacgatggcaattgcaagagaggttgcttctgtcaccagactaggtgtagaggtgtgccagtgcctttcattcttttattgcttatttacccgattaactgtttgaagattgaaattaaatcaagtgaaacataattaggcatgtacatagtagacatttaaagttcaacaactaaaccgccctgtgttccaacgaagtggtattatgctatgtgtatgttcctcttgtcttctctattgtagaaacatatgctgtacattaaagatcgggaacccttgcaggttgctattgttgttggtggcggcaatatcttccgcggggcctcttgggctggatgtagtggactcgaccgctcatcagcagattacattgggtatgatgttcagttttctaatgtctttcataattgaaccatcgtaacatcctgtggttggcaatcgagaatgcattaaatgaagtggaagcgccatgagggttaacctaataatgacacaagaacacccaactcggcatgccttagtagttgcatgcaaccatgcaaatatgctaatttatgtaatccatgctaacttttttttttggctatttaaacatctataataccacgcctgattgtgcctatcggcccatcacgtagaacacatctaaatttcatagaacaaaattccataacaaatttccaagcagaatagtgtactgagtgtaaacttatagttcgattttacaaaccatacaatcaataagtatatactgttctctgtaagtgcaaacttacatgtaagtatttaacatatggtctatatcctttgcccataacgtttttaaaaatgttttttaggttttgttttaaaaaaaagaagacatcattcctgttataagtgatttcataatttctcagcataaaatagttcaccactttatcttactcttttcctaattcagcatgttggctactgtgatgaatgccatatttcttcaagcaacaatggagagcattggaataccaacccgtgtccaaactgcatttcgtatgtcagaagttgcagaaccatacatacgccgaagagctgtcaggcatttagagaaaggaagagttgttatatttgctgctggtacagggaacccattctttacaactgatacagctgctgctcttcgttgtgcagaaagtgagtttatcctccgtttctcactaatgaactggtgtaattgtaatcataaaatctcaacaaaagtagtattggagatacgtgaatacttttatattttaaagccaagtgcttataagctgcaatttcatgtcgtatatttaacaatatatagtactgcaaaacattcaaggtacttttgcgagtttgtcatttatgttagtcatcatgcccctgtcagttgctggtaatagaactagagttctacccacaatagctcgtaatgttagtagcctcacctctgagtttatcccatgaattcatgaagacccttgtgcgccctaaatggttaagctagacagttaggctagacaaggatcgatcatttattttcaaccttgcttcccagaaactagagacatgatgcagagattgttatacatgccatgttagggtgtgtttaactattctatttcacaagaaatcattagtcacagtttccattatgcatgtagaatcattttatcatgaattgagtttgaacttgtctttctataatgatttctcaaataaacatcattgtctcattttgtttattccatcttacaatggctttttttctttcattttgcagtcaatgcagaggtagtacttaaggcaacaaatgttgacggtgtgtacgacgcagaccccaagcgtaacccaaatgcccgccttcttgaggctgtgagctaccatgaggtgcaaacaagagacctctcagtaatggacatgactgccattacgctatgccaagaaaacaacattcctggtaaggagagagctgtcagtttctgagacttgatacagtgtttgatttgcattctttttaatttggcctgtaatcttgcagttgtcgtgtttaatttgcaaaaacctggaaatattgcgaaagctattgttggtgagaaggttggcacgtttataggctgcacaaaagatcaggaccagattgtggggaatgcactggatcaagaaagaagattggtgaacgagttatgatttcactggagctctctgtcgctagctgtgtagctgcattgcctattgcttggtaacatgtggatctctagagtttttaggctagaatagcttatccaaatcctggttccttgtacaacctttgagcaaaaataaaaaaaccaatggtaacagagattttccagctgatatagctgctatgttgtcatactatgtacaatggaatctagagcaatctgataaatcacatttatatcttaaaatcattgcatgtggcatgtatgatgtcttcacct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0965400, RefSeq:Os01g0965400