Os01g0970700

From RiceWiki
Revision as of 05:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0970700| Description = Peptidase M48, Ste24p family protein| Version = NM_001052063.1 GI:115442496 GeneID:4323840| Length = 2519 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0970700

Description

Peptidase M48, Ste24p family protein

Version

NM_001052063.1 GI:115442496 GeneID:4323840

Length

2519 bp

Definition

Oryza sativa Japonica Group Os01g0970700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44621014..44623532

Sequence Coding Region

44621226..44621367,44621475..44621608,44621708..44621814,44621901..44621997,44622149..44622328
,44622766..44622833,44623064..44623121,44623282..44623479

Expression

GEO Profiles:Os01g0970700

Genome Context

<gbrowseImage1> name=NC_008394:44621014..44623532 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44621014..44623532 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcggcggcggcggctgcttctgctccccgcctcctcctgccgccggccgcctccaccttcccacaccagcacgagcacgtccgccgcaactggcaccggccccgccgccaggtcatctctgcccgcgccggcgcctccgtcgccgcccggggccttgatgcagacgacttccgccatccgctggacaagcagaacacactgctgctgagagcagttccagggcttaatgatatgggcaaggctttgctaggaccagtttctgagcaagttatggtacttcagaacattggatcgtctgtgctagtctctgaaaaccagctttcagatcttcatcagatcttgaccgaggcagcaaaactattgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacaccttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctcactagaaaagaactgcaggctgtgttggctcatgaactgggacacctcaagtgtgaccatggcgtgtggcttacatttgccaacatactgacaatgggagcatactctgtccctggatttggcatggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctgacttgtgatcgagcggctcttcttgtagtgcaggaccccaaggttgtgatatctgtgctgatgaaactggccggagggtgcccgtcgcttgcggaccagctgaacgtggacgccttcctggagcaagctcgctcctacgacaaagctgcgtcaaaccccgtcggctggtacatccggaacgctcagacgagagagctgtcgcatcctctgccggtgatgcgagcccgcgagatcgacgagtggtccaggagccgagagtacaagacggtgcagcagaaggtcattcagctccagctcaatgatcacgatgcaagctag</cdnaseq>

Protein Sequence

<aaseq>MAAAAAAASAPRLLLPPAASTFPHQHEHVRRNWHRPRRQVISAR AGASVAARGLDADDFRHPLDKQNTLLLRAVPGLNDMGKALLGPVSEQVMVLQNIGSSV LVSENQLSDLHQILTEAAKLLNTDAPDLYIRQNPVPNAYTLAISGKKPFIVVHTSLVE LLTRKELQAVLAHELGHLKCDHGVWLTFANILTMGAYSVPGFGMVAGFLEEQLYRWLR AAELTCDRAALLVVQDPKVVISVLMKLAGGCPSLADQLNVDAFLEQARSYDKAASNPV GWYIRNAQTRELSHPLPVMRAREIDEWSRSREYKTVQQKVIQLQLNDHDAS</aaseq>

Gene Sequence

<dnaseqindica>2166..2307#1925..2058#1719..1825#1536..1632#1205..1384#700..767#412..469#54..251#agtggtcgtcgccctcgttgtttactttgcttaatttgcttgccctcatcctcatggctgcggcggcggcggctgcttctgctccccgcctcctcctgccgccggccgcctccaccttcccacaccagcacgagcacgtccgccgcaactggcaccggccccgccgccaggtcatctctgcccgcgccggcgcctccgtcgccgcccggggccttgatgcagacgacttccgccatccgctggacaagcaggtgaattcccaattaatttgctactgcctgcttccactgctgcagtgcttatgatatatcatgcctactgtagtatatatgtaatgtaatacaaggattaagtatgtccttcctgaatgatgatggatgattgctgagtttctccttccttggcctgcagaacacactgctgctgagagcagttccagggcttaatgatatgggcaaggctttgctaggtcaccaccacttactcaataattcccctctcttcttttcagctttagtcccatccttaggttacccttatcaattactattatcatccttcactgatcaattcccctttttgtaactcttttaacttagctgaattaatatttgcttcacagtgttatttactgctccatactgtgcctttctcttgctgttaatctttttttttctttttacctaaatgctaatgcaggaccagtttctgagcaagttatggtacttcagaacattggatcgtctgtgctagtctctgaaaaccaggtgcgcttttcatgttaatcatttttaagccattttcaatttcttaacttattattgcaataacagataacctcattgaaaggggaaaatagttcatcaaagataaaaaaaaaggacaaaccagtagtaccgatagaaagccatgaggcttaacttttccatgtaaatcataatattacttccactatgaatatggagttattctagcaaaagagaggcagaagcacgcataagacatgcagacaaatccatggatatattataaattacttttgttgggaaaaaaaaactttttgtagaacattgcacaaacaatgagcataagtaacgctgatatccaaccatacactggttctaccatttcatgtcttttatatatcttatgatttcttttcttactccattgcggcatttacacttttgtttcttttcctcagctttcagatcttcatcagatcttgaccgaggcagcaaaactattgaacacagacgctcctgacttgtacattcggcagaaccctgttcctaatgcttacaccttagcgatcagtggcaaaaagccattcatagttgttcatacaagccttgtggagctgctcactagaaaagaactgcaggtagatacatgactgtgatcatcagtagctgtgtgtttatttatcagttaacccgctctcttcagtctttgcattgtaaaccatgaagatatcatatcagactatggtgttagtagtaactcatggtgtgaagatttgtgtgtttggctaggctgtgttggctcatgaactgggacacctcaagtgtgaccatggcgtgtggcttacatttgccaacatactgacaatgggagcatactctgtccctggtaagctgatctccatctgaataactaaccttaaattgggagtacactagtattaatccatcagatgcatgtattgatcttaccaggatttggcatggttgctgggtttctggaagagcagctctacaggtggctccgggctgcagagctgacttgtgatcgagcggctcttcttgtagtgcaggaccccaaggtaatcaaaatctgaattggatttgtagcagtgtactagtacttactactcggtgatgattaatgtgactgaacgggcgtgttgattgattgtcaagaggttgtgatatctgtgctgatgaaactggccggagggtgcccgtcgcttgcggaccagctgaacgtggacgccttcctggagcaagctcgctcctacgacaaagctgcgtcaaaccccgtcggctggtacatccggtcagccaaacaaacatcttcttactccagctgctgctttaacttgctgctactgcttggtgagattaatttggtgtttgtcatatgcatatgtgtgtgtggtgcaggaacgctcagacgagagagctgtcgcatcctctgccggtgatgcgagcccgcgagatcgacgagtggtccaggagccgagagtacaagacggtgcagcagaaggtcattcagctccagctcaatgatcacgatgcaagctagctaagctgcaggctggaccggcctgatcaactcacttcactgtacaagtagaagtagaaatggaatctagctgtatatgtttgtacatggatggaacggaaccgaactgttggaggtcagattgtattctagtgaagaatatgcacaccacagatatacaagaaaatgcaaagatatattgattctttaataagaaaaataaactaactgct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0970700, RefSeq:Os01g0970700