Os01g0973500

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0973500| Description = Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)| Version = NM_001052083.1 GI:115442536 GeneID:432...")
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Gene Name

Os01g0973500

Description

Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)

Version

NM_001052083.1 GI:115442536 GeneID:4326402

Length

3750 bp

Definition

Oryza sativa Japonica Group Os01g0973500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44776085..44779834

Sequence Coding Region

44776349..44776791,44777826..44777949,44778089..44778231,44778384..44778519,44778600..44778922
,44779430..44779487

Expression

GEO Profiles:Os01g0973500

Genome Context

<gbrowseImage1> name=NC_008394:44776085..44779834 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44776085..44779834 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaactgctgcggaaccaagattagctccgacgccatctcccggaacgcatctggttcaagaagaagaagatcaggaagcaggaggaaggggacggggctgagcagccgggtgtcgtcgtcggtggcggcggtgaccccacggagcgagggcgagatcctgcggtgtgccaacgtgaggagcttcgcgttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgagggaggcttcggctccgtcttcaagggttgggtggacgagaacaccttcctccccagcaggcccggcaccggcatggtcatcgccgtcaagaagctcaaccaggacggcttccagggccacagggaatggctggccgaagtgaactaccttgggcaactgtcacacccaaatcttgtaaagcttgtaggctactgccttcaagatgagcagaggcttcttgtctacgagttcatgcctcggggaagcttggagaatcatcttttcaggaggggctcacattttcagcctctctcctggaatcttcgaatgaaagttgcccttggagcagcaaagggacttgcctttctccacagcgacaaggccaaagttatctaccgtgatttcaagacttccaatgttcttctcgattcgaactacaatgcaaagctgtctgatttcgggttggcaaaggatgggccaactggtgacaagagccatgtctcaacaagagttatgggcacatacggatatgctgctcctgaatatcttgcgacagggcatctgagtgcgaagagcgacgtgtacagcttcggggtggtgatggtggagatgctgtcggggcggcgcgcgctggacaagaaccgccccgccggcgagcacaacctggtggagtgggctcggccctacctcagcagcaggcgccggatcttccgcatcctggacgcccgcctcgccggccagtactcgctcgccggagcccacaaagcggcggcgctggcgctgcagtgcctctccgccgacgccaagaaccggcccaccatgcaccaggtggtcgccgcgctggagcagcttcaggagacgacgaccacgtctcatcatcatcggtcgccgcagagcaggatgttgctcggcggccgtggcttcaacgccagcggcaggtcgtctgctggtgctggtgctcgtccgaggcggctgtcggcgtcgcctctgcctgcctga</cdnaseq>

Protein Sequence

<aaseq>MGNCCGTKISSDAISRNASGSRRRRSGSRRKGTGLSSRVSSSVA AVTPRSEGEILRCANVRSFAFNELKTATRNFRPDSVLGEGGFGSVFKGWVDENTFLPS RPGTGMVIAVKKLNQDGFQGHREWLAEVNYLGQLSHPNLVKLVGYCLQDEQRLLVYEF MPRGSLENHLFRRGSHFQPLSWNLRMKVALGAAKGLAFLHSDKAKVIYRDFKTSNVLL DSNYNAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLSAKSDVYSFGVV MVEMLSGRRALDKNRPAGEHNLVEWARPYLSSRRRIFRILDARLAGQYSLAGAHKAAA LALQCLSADAKNRPTMHQVVAALEQLQETTTTSHHHRSPQSRMLLGGRGFNASGRSSA GAGARPRRLSASPLPA</aaseq>

Gene Sequence

<dnaseqindica>3044..3486#1886..2009#1604..1746#1316..1451#913..1235#348..405#atccaggactttgatgatctcttctcttgagtcttgatccatccatcacccacaataatcctaatcacaagtgggcgtgagagagagggggccagaaggtcaacctttgatttaattagcaggcaggaattaagaggcagctaacagtagcagtagcacacaatcaagctcaaccctcatatatcccgtgatccattgttcagacctgccttattactagctgtagagatcttaattttattgtaaagcaaagctctcacctttatttataactagctgcccttcccttgcatcctattccttccctgcatcagagcagcgagctcgctctccatcccctgcgtgccatgggcaactgctgcggaaccaagattagctccgacgccatctcccggaacgcatctggtaatctagcttcttcaattcgctctcgtatatatttcaccatctagctagctgcataggacgtactaggagtagatagattcttgattcaagtaaaaaagtaaccgctgagtagtgaggcatgtatgattaggaatggagatgttcgtttgtgcctgcctgcaatttgttgatcattcctaattgcttgagtttgttgaaatcgatcctagtaggttaggtagatcatgccgtttccagttccagttgaactgaaataagcgatcggtttcagacagagacaggacgacgcctgcacatactagtagtatatcatcttgtactaatccttgatggactagtatagtatgaaatcattcacttttgtaactaaatattatggtcatctcaatcaatctgagaaagaagttgttatatagatgaggcttctgcattgtgcggtggcgttaactggttggtaaattgacaatgcatgcgtatgatatgagctcattaattggtggtcaggttcaagaagaagaagatcaggaagcaggaggaaggggacggggctgagcagccgggtgtcgtcgtcggtggcggcggtgaccccacggagcgagggcgagatcctgcggtgtgccaacgtgaggagcttcgcgttcaacgagctcaagacggcgacgaggaacttccggcccgacagcgtgctcggcgagggaggcttcggctccgtcttcaagggttgggtggacgagaacaccttcctccccagcaggcccggcaccggcatggtcatcgccgtcaagaagctcaaccaggacggcttccagggccacagggaatggctggtatggattttctttctttctgcataactcttgattgatatactactgtagtatataataacttgcattttaatttgcaggccgaagtgaactaccttgggcaactgtcacacccaaatcttgtaaagcttgtaggctactgccttcaagatgagcagaggcttcttgtctacgagttcatgcctcggggaagcttggagaatcatcttttcaggagtaagccgcgcctcctctcaactgcccttttctttttcttttaatttattattactagtatatatattcgggatgattttgatttttctcaaccgagaagtctgaaacggatggtggtgttgacaagttttggacggccttgcacaatgcagggggctcacattttcagcctctctcctggaatcttcgaatgaaagttgcccttggagcagcaaagggacttgcctttctccacagcgacaaggccaaagttatctaccgtgatttcaagacttccaatgttcttctcgattcggtacgctactatcaatatacgttcgtcgttttatcctcatctcacaagcattaattaattgtcagttgttaaattgctgatcaatatatgataattcgattcggtgcctcaactctactctcttgttcgtcactgacagaactacaatgcaaagctgtctgatttcgggttggcaaaggatgggccaactggtgacaagagccatgtctcaacaagagttatgggcacatacggatatgctgctcctgaatatcttgcgacaggtaagcattcagacctgcgctgcaaattttcaatttgattcttgttttgctcaaaccttttcctacaactatttatagaatttcagttgttactagtagaagtatatgttaaagatcagactttatatatgtaatgataatgaaaggtcagatgcattttagcaagacaatctctgcatttgccagggttgctagctgttgttgttaggctatctccaacaatcaaacccaaaatacaggacccatttcatatttgcatagcgctaaagtcaaatagttcaatacctatttttgatcttctctaacaataagacctaaaagagaacccttcctataaataggtcttcaagagagaggatactcagatttaggttatgcttcttatagcacgcaaaatgagtcttctgtataggtactctgttggaggctaaaatagtactatcgaagacccattttggatttaggtgctcttatgggtcacttgttggagacagtcttatgtatgcagatgcagtaggtatgtgtaaggattaaaaggttataatgaaagctggtctgcttggcagcttgtgctcgtcctgaagcactagacgaagtagtaaagaatactcatcctctcctgttgaaagctgaagtcatatatagagtagttaggtgcagacaagtctgtccaatttttttgtcatggtttcagaccggcctaactggctttgcttaaatgtggactggaccccttgagcacatgtgctaaaccaaattaattacactttctttagttaattactcactcgatcatatatccacagaaataaaaaatgctgcacaatcttgtacgtactacagtactactacctagatatatactatatactaagaaattaagaatgccgagaaagacctgtagtctcagatgagctgtactctaatagtattaagcccactaggtaggtgtcggttaatctgtaatgcatacagcatctaaacagaaacgtagctcagctaatgatgatgcatctgaatgttggatggtgcagggcatctgagtgcgaagagcgacgtgtacagcttcggggtggtgatggtggagatgctgtcggggcggcgcgcgctggacaagaaccgccccgccggcgagcacaacctggtggagtgggctcggccctacctcagcagcaggcgccggatcttccgcatcctggacgcccgcctcgccggccagtactcgctcgccggagcccacaaagcggcggcgctggcgctgcagtgcctctccgccgacgccaagaaccggcccaccatgcaccaggtggtcgccgcgctggagcagcttcaggagacgacgaccacgtctcatcatcatcggtcgccgcagagcaggatgttgctcggcggccgtggcttcaacgccagcggcaggtcgtctgctggtgctggtgctcgtccgaggcggctgtcggcgtcgcctctgcctgcctgagtgacacatatggcgacggcgtgttaattagtagattattatattccttgatgatgagtgacttgtaaatcaagaggcatgcagattgattgcttgattaagcttcttcattcatgttggccgctgcaaatccgaccgactcttctccttccttccttccttcctttctcccttttgcaacaacttgtacagttctttttttcattttttttaacgtactacaccaattatatatatgtaccttgaataaaacagaaattgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0973500, RefSeq:Os01g0973500