Os01g0974500

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0974500| Description = Pectinacetylesterase family protein| Version = NM_001052090.1 GI:115442550 GeneID:4324296| Length = 3450 bp| Defini...")
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Gene Name

Os01g0974500

Description

Pectinacetylesterase family protein

Version

NM_001052090.1 GI:115442550 GeneID:4324296

Length

3450 bp

Definition

Oryza sativa Japonica Group Os01g0974500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44861563..44865012

Sequence Coding Region

44861718..44861843,44862161..44862306,44862423..44862528,44862616..44862693,44862810..44862860
,44862949..44863009,44863479..44863603,44864159..44864248,44864374..44864453
,44864548..44864977

Expression

GEO Profiles:Os01g0974500

Genome Context

<gbrowseImage1> name=NC_008394:44861563..44865012 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44861563..44865012 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgcctctcttctccgcgccggcgctccaccgccgccgccttctccgccacgccgccgcattcgcccttgtgctcctcgccgtcgccctcctcttcctcctcctcgtacacccccgctcgctcggcaccccttccccttccccgtcctacggccaccgcctccccacgctcgtcgacctcaccctagtccacggcgccaaggagaagggcgctgtctgcctcgacgggaccccgcctgggtaccactggctgccaggcttcggcgacggatctaacaaatggctcctccacctagagggcgggagctggtgcaggaatcgcacgtcctgtgatcatcgcaagaaaaccagtcttggctcatctgcttacatggaaacccgggtcgagttcgtcggcatcctgagcgacgacaaggcccagaacccagatttttacaactggaacaaggtcaagatcaggtattgtgatggtgcctccttatctggaaatgtccaagatgaacaccagtatggcgccactttcttcttcagaggccagcgcatctgggaggccgtcatggctgaacttctacccaagggtctagcccgtgctaaacaggcttttcttacaggatgctctgcaggtggtctatccacatacattcactgtgatgatttccgtgcacttttaccaaaggattctactgttaagtgtcttgcagatggtggtttttttcttgacgtggaagacatttctgggagaaggtatatgcggggcttctataatgatgttgctcgtcaacaggatttgcggaaacggttccctggttgtagttcagatatggaaccagggcagtgctttttcccacaagaagtggcgaaaggcatcaccaccccaatgtttattctcaatccagcatatgatgtttggcaggtagagcatgtcttgactccagacggatctgaccctcaaaatctgtggcaagattgcagaatggatattaccaagtgtaatacgaaacagcttgaaattctacaaggttttagaaaatcactgcttgatgctataagtgaattcaagaagaaaaggggctggggcatgttcattgattcatgctttatacattgccaatccatgaagtctttggcttggcactccccatctgcttcgagaataaacaataagactgtggctgaagcggtgggcgactggttctttgatcggagagaggtgaaggaaatagactgtgaatatccgtgcaacccaacatgcttcaatgttgttcttgaacaaccctatcaggaaggctga</cdnaseq>

Protein Sequence

<aaseq>MPPLFSAPALHRRRLLRHAAAFALVLLAVALLFLLLVHPRSLGT PSPSPSYGHRLPTLVDLTLVHGAKEKGAVCLDGTPPGYHWLPGFGDGSNKWLLHLEGG SWCRNRTSCDHRKKTSLGSSAYMETRVEFVGILSDDKAQNPDFYNWNKVKIRYCDGAS LSGNVQDEHQYGATFFFRGQRIWEAVMAELLPKGLARAKQAFLTGCSAGGLSTYIHCD DFRALLPKDSTVKCLADGGFFLDVEDISGRRYMRGFYNDVARQQDLRKRFPGCSSDME PGQCFFPQEVAKGITTPMFILNPAYDVWQVEHVLTPDGSDPQNLWQDCRMDITKCNTK QLEILQGFRKSLLDAISEFKKKRGWGMFIDSCFIHCQSMKSLAWHSPSASRINNKTVA EAVGDWFFDRREVKEIDCEYPCNPTCFNVVLEQPYQEG</aaseq>

Gene Sequence

<dnaseqindica>3170..3295#2707..2852#2485..2590#2320..2397#2153..2203#2004..2064#1410..1534#765..854#560..639#36..465#ctcaacagatccaacaacaacaactagtctcagtcatgccgcctctcttctccgcgccggcgctccaccgccgccgccttctccgccacgccgccgcattcgcccttgtgctcctcgccgtcgccctcctcttcctcctcctcgtacacccccgctcgctcggcaccccttccccttccccgtcctacggccaccgcctccccacgctcgtcgacctcaccctagtccacggcgccaaggagaagggcgctgtctgcctcgacgggaccccgcctgggtaccactggctgccaggcttcggcgacggatctaacaaatggctcctccacctagagggcgggagctggtgcaggaatcgcacgtcctgtgatcatcgcaagaaaaccagtcttggctcatctgcttacatggaaacccgggtcgagttcgtcggcatcctgagcgacgacaaggcccagaacccaggtcaaatccaatcgctctctctcacctctttgcacttctacttactactacttgctattggagtacttcacttcacacatacatagtgatgcagatttttacaactggaacaaggtcaagatcaggtattgtgatggtgcctccttatctggaaatgtccaagatgaacaccaggtttatttgcaccaaccaacctcctattcctatacactgtactagtcaccataccctacactccccacttcacttcaccacattttcttacttgttctactgtactgcgccgtcattctctacagtatggcgccactttcttcttcagaggccagcgcatctgggaggccgtcatggctgaacttctacccaagggtctagcccgtgctaaacaggtttcctcttccttccaattaaaataggatgcccgattattattcatactcactgctagaaccttttgacttatgaattactagtatcttattgtttgtcgcagtattggatcggtctggctgcttttacgcaccacactagaatatgtattgatacagggaaaataattcactttcagcatgaatgttgtcttcacttgcaaagccctgtcaattattgatcatgctcacctgatcgccacaatattcctctaaaataatgtactacaagtgttcctcgtcatttttctatatcttgtacctgtagctgacaaccaatctctttaagcccttattgtggatgatttacacccacttttatgatttttatgctttgatcttttgatctcctcattttaatgtgtttcatattattttaaccattcatttacagtacttgcaagttagcgaagggatttttccatagctatatcaaatgattcattcctatgtttgatgcaataactcaaaatgttgctgtgttaatttatttctttttatttcctacatttgcaggcttttcttacaggatgctctgcaggtggtctatccacatacattcactgtgatgatttccgtgcacttttaccaaaggattctactgttaagtgtcttgcagatggtggtttttttcttgacgtgtatgtgcttgctttgatcttgagcactgcagtgtttcaatatcctcttccctgtttaagttttcaacatgcaattcacgcattgcttcattatcctttcttctggactgctgctacttcagtataagcatctgggaatgctaagttgtcaaggggtttgatgttgacaatttgtcatgattttattatatgttaactttggatgtgtaaaatgtttacatttaaaaccacattgcctgctcacctcaggtgaatcagctgtggacgaataagttagctatgcatgtgtttactgctgatcatccaacaatgtgcccaataacccataattcacacttccacttttggggtcaacatattcataggatagcttatcacttcttctggggcattggccattagcaaaacacaagtatagccagcccttaaaacttgcattttactgttcctttaacttttctcattacagggaagacatttctgggagaaggtatatgcggggcttctataatgatgttgctcgtcaacaggtcgctgtctgcacttttctctgcgtataccctttttttgtttttttttaattgtatgattcttatgtttgctgttgatttgttgcaggatttgcggaaacggttccctggttgtagttcagatatggaaccagggcaggtaatcctttagttgtttttatgatactgtttcttgtattaatatcatcaccttttttattcagtacttttcaagctgttatgtgctaagtagcaatccttaatcgtgccttgtagtgctttttcccacaagaagtggcgaaaggcatcaccaccccaatgtttattctcaatccagcatatgatgtttggcaggtaccattatccgtatctgttggcaggttccatgttctgttagcagctccaatattagtgtgataaaaaatttgttgtccttttcaggtagagcatgtcttgactccagacggatctgaccctcaaaatctgtggcaagattgcagaatggatattaccaagtgtaatacgaaacagcttgaaattctacaaggttgtaatatgataaactcatgacatgtgctctactgcttcatgccttctggatgactttaccttccatccgctgtcactttggcaccttaccatctcgagaaatatttttttcaggttttagaaaatcactgcttgatgctataagtgaattcaagaagaaaaggggctggggcatgttcattgattcatgctttatacattgccaatccatgaagtctttggcttggcactccccatctgcttcgagaataaacaataaggtaacacatgcggaatgatatgatcttgtttatagaactataggttggcatgtcccccgtaggatttgaacttacagactttggtggttagatattgcatcgttttagagtttgatggtgtagtcttattgcaatgtcgtcatggcttctgaatgccagcaagatgtagaatgctgaaatcaagtctgatcagagggtagtacttaacttactggttgtcgaccaatatttatattctttgcagtcctgctgattcatttgcttctgcgatcaatgacatgtcatatactcacatctgcttcaattctggtgaacagactgtggctgaagcggtgggcgactggttctttgatcggagagaggtgaaggaaatagactgtgaatatccgtgcaacccaacatgcttcaatgttgttcttgaacaaccctatcaggaaggctgacatgtggttcttcgccgttgtagtttaccgatgatttgaagcagaatatacccacccctatggggctctcagatacagtatgtccagttgaatgggacacacactagtagtagtgcacctcttgaggaccgttcaaacatagaaatattgacaag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0974500, RefSeq:Os01g0974500