Os01g0976900

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Revision as of 05:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0976900| Description = Protein kinase-like domain containing protein| Version = NM_001052106.2 GI:297598424 GeneID:4327811| Length = 3561 b...")
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Gene Name

Os01g0976900

Description

Protein kinase-like domain containing protein

Version

NM_001052106.2 GI:297598424 GeneID:4327811

Length

3561 bp

Definition

Oryza sativa Japonica Group Os01g0976900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44970293..44973853

Sequence Coding Region

44970293..44971640,44971746..44971814,44971961..44972032,44972165..44972233,44972467..44972910
,44973364..44973649,44973727..44973853

Expression

GEO Profiles:Os01g0976900

Genome Context

<gbrowseImage1> name=NC_008394:44970293..44973853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44970293..44973853 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctcctctctgctgctgcctcctgcgcgcgcggcggctcctcttcttcttcttcttcttcttcttcttcttcttcgccgtcgccgtcgtcttgttctcctccgtctccgtcgcccagatacctgggttccagagcatcgactgcgggggctccggcaactacaccgacgaggtcgggctggagtggacgggcgacgaggcgtacgtgggcgggggcgcaggcacgacggcgagcatctcgtccatctcggggcaggggcggcggccttacaggacggtgcggtatttcccagcggacgggcgcaagtactgctacagggtgagcgtgaaggccaggacgaggtacctggtgcgtgcgagcttcctgtacggcaacttcgacggcagcagggtgttcccggagttcgacctactggacctcaacggcttcccgggcagcgggtgggcctgctcgtatctggcggagatcgaggacgacgcggccgccacggcgcgaaggttcaagctctacatcccggggctggccgaggtgagcaagccgacggtggacatcggagagaacgcgccggggaagtaccgggtgtaccagccgggctacgacaacatctcgctgccgttcgtgctccccttcgccttccgcaagacggacgactccgccaggggccccatcctcaatgccatggagatctacagctatatccccatactccctgcctcgcccgacgccgtcgccatggacgccctggcggcgcgctaccagcagcagcagcacagctgggcgcgggagggcggcgacccgtgtgttcccgcaccctggtcctggctcacttgcacctcatccagagtcatcgccatccggcttgacaacaacatgctgacaggcccaattccggacctcagtgcttgtacaaacctgacagtcatacacttagagaacaatcaactggagggcggtgtgccgtcatacctaagcggtctgcccaagctcagcgagctgtacctagagaacaacaggctgtctggagtcattcccagggctctgctaagtagaaccattgttttcaagtactcagggaacaagcatgtccgagtggggaagcaagaggaggaggagcggaatgtgataattgggatatgtgcgctgatgggaataggcttgttgcttgcagctgccctgtgctatgcctataatgttagtgttagcgggaggaaacaattacaaggtgctagtgcgggtgggaacagcaagagcaagagcatagtcgtgtccgcggagcagaagaagaaggcaacaccagtagcaggaggaggaggaggagaaatagacaacatgatggcggctatggcagcgcggggtccgttggagttcgaggtgagggagctggaggaggcgaccagcaagttcgcgaggaagatcgggtcgggcgggttcggggtggtgtactacgggaggctgggagacgggagggagatcgcggtgaaggtggcgagcagcaacgagtcgatccaagggaagaagcagctggccaacgaggtggcgcttctgtccaggatacaccaccgcaacctggtggcgttcctgggctactgctgggagcgcgacagcagcagctacatgctggtgtacgagtacatgcacaacggcagcctcaaggagcagctgcagatgatgagcatcagctggctccggcggctgcaggtggcggaggacgcggccaaggggatcgagtacctgcactgcggctgcacgccggccatcatccaccgggacatcaagaccagcaacatcctcctggacgcccacatgagggccaaggtgtccgacctgggactctccaagtccaacaaggccaccaactccaccaccaataccatcaccacccacgtgcgcggcaccctcggctacctggacccgcactactacgtctcccagcagctcacccacaagagcgacctctacagcttcggcatcatcctgctcgagctcatctccggccgcccgcccatcctgctcacgcccggcgccggtgccatggccagcctcgggccctgggccaagtcgcactacgagagcggcgacatcgaggccatcgtggacccgtcgctgcgcggccgctaccgcgacgtgcactcggtgtggaaggtggccgagacggcggtgcggtgcatcgacgccgatccccgggggcgcccgtccatgcccgaggtggtcaaggacatccaggaggccatcgcgctggagatgccgtcctcggagtcggagaggcccgccgccagcttcttctctccgggggcgggggcagccggtgcgcgctcctcggcgacggtgcggtcgcacgacctcgtcatggacaacctcatgtacgactccagcttctgcgattccctcaacctgccccgcacgcccagatag</cdnaseq>

Protein Sequence

<aaseq>MAPLCCCLLRARRLLFFFFFFFFFFFAVAVVLFSSVSVAQIPGF QSIDCGGSGNYTDEVGLEWTGDEAYVGGGAGTTASISSISGQGRRPYRTVRYFPADGR KYCYRVSVKARTRYLVRASFLYGNFDGSRVFPEFDLLDLNGFPGSGWACSYLAEIEDD AAATARRFKLYIPGLAEVSKPTVDIGENAPGKYRVYQPGYDNISLPFVLPFAFRKTDD SARGPILNAMEIYSYIPILPASPDAVAMDALAARYQQQQHSWAREGGDPCVPAPWSWL TCTSSRVIAIRLDNNMLTGPIPDLSACTNLTVIHLENNQLEGGVPSYLSGLPKLSELY LENNRLSGVIPRALLSRTIVFKYSGNKHVRVGKQEEEERNVIIGICALMGIGLLLAAA LCYAYNVSVSGRKQLQGASAGGNSKSKSIVVSAEQKKKATPVAGGGGGEIDNMMAAMA ARGPLEFEVRELEEATSKFARKIGSGGFGVVYYGRLGDGREIAVKVASSNESIQGKKQ LANEVALLSRIHHRNLVAFLGYCWERDSSSYMLVYEYMHNGSLKEQLQMMSISWLRRL QVAEDAAKGIEYLHCGCTPAIIHRDIKTSNILLDAHMRAKVSDLGLSKSNKATNSTTN TITTHVRGTLGYLDPHYYVSQQLTHKSDLYSFGIILLELISGRPPILLTPGAGAMASL GPWAKSHYESGDIEAIVDPSLRGRYRDVHSVWKVAETAVRCIDADPRGRPSMPEVVKD IQEAIALEMPSSESERPAASFFSPGAGAAGARSSATVRSHDLVMDNLMYDSSFCDSLN LPRTPR</aaseq>

Gene Sequence

<dnaseqindica>2214..3561#2040..2108#1822..1893#1621..1689#944..1387#205..490#1..127#atggctcctctctgctgctgcctcctgcgcgcgcggcggctcctcttcttcttcttcttcttcttcttcttcttcttcgccgtcgccgtcgtcttgttctcctccgtctccgtcgcccagatacctggtgagtctaataatctctatattttattttatggagttgtgggtcagtgagtgagatggtacgtaatgcgtgggcagggttccagagcatcgactgcgggggctccggcaactacaccgacgaggtcgggctggagtggacgggcgacgaggcgtacgtgggcgggggcgcaggcacgacggcgagcatctcgtccatctcggggcaggggcggcggccttacaggacggtgcggtatttcccagcggacgggcgcaagtactgctacagggtgagcgtgaaggccaggacgaggtacctggtgcgtgcgagcttcctgtacggcaacttcgacggcagcagggtgttcccggagttcgacctgtacgtgggcgcctcgcggtggtccaccatcgtcatctacgacgagtccaaggtggtgacgagggagatggtggcgctggctcagtccggaccctccctctccgtctgcctcgccaacgccaccaccggccaccccttcatctccaccctcgagctccgccctctcaacgcctccctctaccacaccgccttcgaggccgccttcttcctctccctcgccgcccgcatcaacttcggcgcccccaccgccgatcccgtccgctaccccgacgacccctacgaccgcgtctgggagtccgacatggcgcgcaggccaaacttcctcgtcgacgccgcgcccggcaccatccgcgtcgccaccgacaaccccgtcttcgtggcctccggcgagcgcccgccgcagaaggtgatgcagaccgcggtggtgggcacgctgggcgcgctcacctacagactggacctcaacggcttcccgggcagcgggtgggcctgctcgtatctggcggagatcgaggacgacgcggccgccacggcgcgaaggttcaagctctacatcccggggctggccgaggtgagcaagccgacggtggacatcggagagaacgcgccggggaagtaccgggtgtaccagccgggctacgacaacatctcgctgccgttcgtgctccccttcgccttccgcaagacggacgactccgccaggggccccatcctcaatgccatggagatctacagctatatccccatactccctgcctcgcccgacgccgtcgccatggacgccctggcggcgcgctaccagcagcagcagcacagctgggcgcgggagggcggcgacccgtgtgttcccgcaccctggtcctggctcacttgcacctcatccagagtcatcgccatgtacgtacgtcgtcactctttcaattattcccgggcgtttccttccttggagtagtaacgtagtacggaacgggtgcagaaatctttcaggaaacaacttgacaggcgccattccaccggagctagcggcgctcccatgcttacaggagatgtacgtaacacaagcgactgactcgctcttaattccattaattaagctgatcgatgagctctcttctctgacgaatttgcagccggcttgacaacaacatgctgacaggcccaattccggacctcagtgcttgtacaaacctgacagtcatgtgagtaactcaattcaccacttgcacgcacttgcaccaggcttatttctgttttcctttttctatagtatatactccttatgtccatattataaactaacaatattgtcgaattgaaattttcttttgcagacacttagagaacaatcaactggagggcggtgtgccgtcatacctaagcggtctgcccaagctcagcgagctgtgagtcttttatatactgtatgtactactatatatcctagtctaggaacatatataatagtaccatataagtgagagatttgttaagaaaatgcatgctgataattaaattataagagaatcggcatggtatgtataaaatgcaggtacctagagaacaacaggctgtctggagtcattcccagggctctgctaagtagaaccattgttttcaagtgagtgatatatatgatgtatgcctataataataatgaaataaaatgaatggtgaaattaattactccagtatatgcgcgcggcatatgtacgtatgtttgcaggtactcagggaacaagcatgtccgagtggggaagcaagaggaggaggagcggaatgtgataattgggatatgtgcgctgatgggaataggcttgttgcttgcagctgccctgtgctatgcctataatgttagtgttagcgggaggaaacaattacaaggtgctagtgcgggtgggaacagcaagagcaagagcatagtcgtgtccgcggagcagaagaagaaggcaacaccagtagcaggaggaggaggaggagaaatagacaacatgatggcggctatggcagcgcggggtccgttggagttcgaggtgagggagctggaggaggcgaccagcaagttcgcgaggaagatcgggtcgggcgggttcggggtggtgtactacgggaggctgggagacgggagggagatcgcggtgaaggtggcgagcagcaacgagtcgatccaagggaagaagcagctggccaacgaggtggcgcttctgtccaggatacaccaccgcaacctggtggcgttcctgggctactgctgggagcgcgacagcagcagctacatgctggtgtacgagtacatgcacaacggcagcctcaaggagcagctgcagatgatgagcatcagctggctccggcggctgcaggtggcggaggacgcggccaaggggatcgagtacctgcactgcggctgcacgccggccatcatccaccgggacatcaagaccagcaacatcctcctggacgcccacatgagggccaaggtgtccgacctgggactctccaagtccaacaaggccaccaactccaccaccaataccatcaccacccacgtgcgcggcaccctcggctacctggacccgcactactacgtctcccagcagctcacccacaagagcgacctctacagcttcggcatcatcctgctcgagctcatctccggccgcccgcccatcctgctcacgcccggcgccggtgccatggccagcctcgggccctgggccaagtcgcactacgagagcggcgacatcgaggccatcgtggacccgtcgctgcgcggccgctaccgcgacgtgcactcggtgtggaaggtggccgagacggcggtgcggtgcatcgacgccgatccccgggggcgcccgtccatgcccgaggtggtcaaggacatccaggaggccatcgcgctggagatgccgtcctcggagtcggagaggcccgccgccagcttcttctctccgggggcgggggcagccggtgcgcgctcctcggcgacggtgcggtcgcacgacctcgtcatggacaacctcatgtacgactccagcttctgcgattccctcaacctgccccgcacgcccagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0976900, RefSeq:Os01g0976900