Os02g0102200

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Revision as of 02:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0102200| Description = Similar to Transmembrane amino acid transporter protein| Version = NM_001052130.1 GI:115443630 GeneID:4327987| Lengt...")
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Gene Name

Os02g0102200

Description

Similar to Transmembrane amino acid transporter protein

Version

NM_001052130.1 GI:115443630 GeneID:4327987

Length

2294 bp

Definition

Oryza sativa Japonica Group Os02g0102200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:119391..121684

Sequence Coding Region

119680..119733,119842..120238,120331..120424,120518..121529

Expression

GEO Profiles:Os02g0102200

Genome Context

<gbrowseImage1> name=NC_008395:119391..121684 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:119391..121684 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgccgagaagccgaacgctcccgccaaggattcatgatggcgtcgtggtggtagaacgcgatgtgaggaggtaccagcagctgccgcagcaggtggagatggagatgacgacgaccaagaggcagcaggatcatcaggtggagacgatgacgacgaagaagattgatgaagaagatgaagaggtggacgacgacggtcgggcgaagcggagggggacggtgtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctttgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctacatggacgccgtcaaggccaacctcggcggtgccaaggtgaaggtttgcggatgcattcagtacctcaaccttttgggagtggccatcggttacaccatcgccgcctccattagcatgatggcgatccagcgttccaactgcttccacgcgagaggagagcaggatccatgccacgcctccagcaacgtgtacatgatcatgttcggcatcgtccaggtgttcttctcccagatccccgacttcgaccaagtctggtggctctccatcctcgccgccgtcatgtccttcacctactccgccgtcggcctcgccctcggcgccgcccaggtcgcccagaaccgcacgttcgccggcagcgccatgggcgtcgccgtgggcttcgtcaccaagaccggcgacgtcgtcacccccgcgcagaaggtgtggcgcaacctgcaggcgctgggggacatcgccttcgcctactcctactccatcatcctcatcgagatccaggacacgctgcggtcgccgccggcggaggcgaggacgatgcggaaggcgacggggatcagcgtggtggtgacgagcgtgttctacctgctgtgcggatgcatggggtacgcggcgttcggcgacgacgcgccggggaacctcctcaccggcttcggcttctacaagccctactggctgctggacgtggccaacatggcgatcgtggtacacctggtgggggcgtaccaggtgtactgccagccgctcttcgccttcgtggagaggagggcggagcggcggtggcccaacggcctccccggcggcgactacgacctggggtggataaaggtgagcgtgttcaggttggcgtggcggacgtgcttcgtggcggtgacgacggtggtggcgatgctgctgcccttcttcaacgacgtggtgggcatcctgggggcgctcggcttctggccgctcaccgtctacttccccgtcgagatgtacatcgcccaccgccgcatccggaggtggacaaccacctgggtcggcctgcaggcgctcagcctcgcctgccttctcgtctcgctcgccgccgccgtcggctccatcgccggcgtcctgctcgacctcaagtcctaccgtccattccgctccacctactaa</cdnaseq>

Protein Sequence

<aaseq>MLPRSRTLPPRIHDGVVVVERDVRRYQQLPQQVEMEMTTTKRQQ DHQVETMTTKKIDEEDEEVDDDGRAKRRGTVWTAASHIITAVIGSGVLSLAWAIAQLG WVVGPTVMLLFAAVIYFTSNLLADCYRTGDPATGRRNYTYMDAVKANLGGAKVKVCGC IQYLNLLGVAIGYTIAASISMMAIQRSNCFHARGEQDPCHASSNVYMIMFGIVQVFFS QIPDFDQVWWLSILAAVMSFTYSAVGLALGAAQVAQNRTFAGSAMGVAVGFVTKTGDV VTPAQKVWRNLQALGDIAFAYSYSIILIEIQDTLRSPPAEARTMRKATGISVVVTSVF YLLCGCMGYAAFGDDAPGNLLTGFGFYKPYWLLDVANMAIVVHLVGAYQVYCQPLFAF VERRAERRWPNGLPGGDYDLGWIKVSVFRLAWRTCFVAVTTVVAMLLPFFNDVVGILG ALGFWPLTVYFPVEMYIAHRRIRRWTTTWVGLQALSLACLLVSLAAAVGSIAGVLLDL KSYRPFRSTY</aaseq>

Gene Sequence

<dnaseqindica>290..343#452..848#941..1034#1128..2139#atctatcgatcttcttccacacgcgcgtacgtgtgtgttggtcgtctcaaggttagttattgaaacgtatgtcttatattactaatttgtttcatccccgttgtatatgctatatatgtttttcttatcttatgtagtatatgtaattaaaataaataggagaagaattaagctggttaattattttttctggctggtatatgcataatagtaatatatagaagagattgtgttgcagggtatatatagcaaattaataatagatagatcgatcgatcgagtggagacgatgttgccgagaagccgaacgctcccgccaaggattcatgatggcgtcgtggtggtaagcaagcacagatgttgcagtgttggtaatggagcatattgatagatgctagctgcatgcgcgcgcgcgcggggtgatcgatatatgatatgatggatgctgcaggtagaacgcgatgtgaggaggtaccagcagctgccgcagcaggtggagatggagatgacgacgaccaagaggcagcaggatcatcaggtggagacgatgacgacgaagaagattgatgaagaagatgaagaggtggacgacgacggtcgggcgaagcggagggggacggtgtggacggcggcgtcgcacatcatcacggcggtgatcgggtcaggtgtgctgtcgctggcgtgggcgatcgcgcagctgggctgggtggtgggccccaccgtcatgctcctctttgctgccgtcatctacttcacctccaacctcctcgccgactgctaccgcaccggcgaccccgccaccggcagaaggaactacacctacatggacgccgtcaaggccaacctcggtcggtcgatctagctccttggatcttgcatagtactagtatatacactacacagatcgagatatctgatccatcaatatatcgatgtgcaggcggtgccaaggtgaaggtttgcggatgcattcagtacctcaaccttttgggagtggccatcggttacaccatcgccgcctccattagcatgatgtatgtgcgtagttgttatattttgggagaaagagagagagagagagagagtaataataattaatggaagaaatgcatggtataaatatgcagggcgatccagcgttccaactgcttccacgcgagaggagagcaggatccatgccacgcctccagcaacgtgtacatgatcatgttcggcatcgtccaggtgttcttctcccagatccccgacttcgaccaagtctggtggctctccatcctcgccgccgtcatgtccttcacctactccgccgtcggcctcgccctcggcgccgcccaggtcgcccagaaccgcacgttcgccggcagcgccatgggcgtcgccgtgggcttcgtcaccaagaccggcgacgtcgtcacccccgcgcagaaggtgtggcgcaacctgcaggcgctgggggacatcgccttcgcctactcctactccatcatcctcatcgagatccaggacacgctgcggtcgccgccggcggaggcgaggacgatgcggaaggcgacggggatcagcgtggtggtgacgagcgtgttctacctgctgtgcggatgcatggggtacgcggcgttcggcgacgacgcgccggggaacctcctcaccggcttcggcttctacaagccctactggctgctggacgtggccaacatggcgatcgtggtacacctggtgggggcgtaccaggtgtactgccagccgctcttcgccttcgtggagaggagggcggagcggcggtggcccaacggcctccccggcggcgactacgacctggggtggataaaggtgagcgtgttcaggttggcgtggcggacgtgcttcgtggcggtgacgacggtggtggcgatgctgctgcccttcttcaacgacgtggtgggcatcctgggggcgctcggcttctggccgctcaccgtctacttccccgtcgagatgtacatcgcccaccgccgcatccggaggtggacaaccacctgggtcggcctgcaggcgctcagcctcgcctgccttctcgtctcgctcgccgccgccgtcggctccatcgccggcgtcctgctcgacctcaagtcctaccgtccattccgctccacctactaattaacgatcgatgattgtgctactagaaaggaaataggtatccgatgtatcatgagcttgggctggccataacgatgcaatattaataaggcctcaacccacaagatgcaacgatggtttcaattataaggttgggctagacacggttcatccac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0102200, RefSeq:Os02g0102200