Os02g0116700

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0116700| Description = Protein kinase-like domain containing protein| Version = NM_001052216.1 GI:115443802 GeneID:4328081| Length = 3356 b...")
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Gene Name

Os02g0116700

Description

Protein kinase-like domain containing protein

Version

NM_001052216.1 GI:115443802 GeneID:4328081

Length

3356 bp

Definition

Oryza sativa Japonica Group Os02g0116700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:884324..887679

Sequence Coding Region

884467..887649

Expression

GEO Profiles:Os02g0116700

Genome Context

<gbrowseImage1> name=NC_008395:884324..887679 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:884324..887679 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagcagaggaggagctttacctgttgctgtactggtgctgttgctactgctggtgctcaagaacggcgccgcccagtcgcggtgcagctccggcgacctcgccgcgctgcgtggcttctcggccggtctcgacggcggcgtcgacgggtggccggcgggggtcggcaacgcgtcgtcgtcgtcgacatcggacggtggcgactgctgcgcgtggcgcggcgtggcgtgcgacgaggcgggggaggtcgtcggcgtggtcctgcccaacgcgacgctccggggagtggtggccgagtcgctcgccggcctcgccgcgctccgggtgttgaacctgtcgagtaacgcgctccgtggcgcgctcccggcggggctcctccggctgcgggcgctccaggtgctcgacgtcagcgtcaacgcgctggagggggcggtggcggcggcggccgtcgtcgacctcccggcgatgcgcgagttcaatgtctcgtacaacgcgttcaacggcagccaccccgtgctcgccggcgccggcaggctcacgtcgtacgacgtctccgggaacagcttcgccggccacgtcgacgccgccgccctgtgcggcgcgtcgccggggttgcggacactacggctctcgatgaacggcttctccggcgatttccccgtggggttcgggcaatgccggtcgctcgtggagctctcgctcgacggcaacgccatcgccggggctctccccgacgacgtgttcggcctgacgtcgctgcaggtcctcagcctccacaccaactcgctctccggccacctgccgcccagcctgcgcaacctcagcagcctcgtccgcctcgacgtctccttcaacaacttcaccggcgacctccccgatgtgttcgacgcggtccccggtctccaggagctctcggcgccgtccaacctgctcaccggcgtactccccgccacgctgtcgcgatgctcccgcctccgcatcctcaacctgcggaacaactcgctcgccggagacatcggcctcgacttccgcgccctccagagcctcgtgtacctcgacctcggcgtcaaccgcttcacggggccaatcccggcgagcctcccggagtgcagggccatgacggcgctaaacctcggccggaacaacctcaccggcgagataccggcgacgttcgccgcgttcacgtcgctgtccttcctctccctcaccgggaacagcttctccaacgtctcgtcggcgctgcggactctgcagggtttacccaacctgacgagcctggtgctcactaagaacttccacggcggcgaggcgatgccgaccgacatcgccgggttcgccggcatcgaggtgctcgtcatcgccaacggcgagctgcatggcgccataccggcgtggctcgcaggcctcagcaagctcaaggtgctcgacctgtcgtggaaccacctcgccggcccgatcccgccatggctcggcgagctcgaccgcctcttctacctcgacgtatcgaacaactccctccacggcgagatacctctcaagctggcgtggatgccggcgctcatggccggcggcgatggcagcgacgaggcgcacgtgcagaacttccccttcttcatacgccccaactcgtcggcgagggggaggcagtacaaccaggtgagccggttcccgccgtcgctggtgctggcgcggaacaacctcaccggcggcgtcccggcggcgctcggggcgttgaccagggtgcacgtcgttgacctgagctggaacgcgctgtcggggccgatcccgccggagctgtcgggcatgtcgagcgtcgagtcgctcgacgtgtcgcacaacgcgctctccggcgccatcccgccgtcgctggcgcggctcagcttcctctcccacttcgacgtcgcgtacaacaacctctccggcgaggtccccgtcggcgggcagttctccacgttctcccgcgccgacttcgacggcaaccccttgctctgcggcatccacgcggcgcggtgcgcgccgcaggccgtggacggcggcggcggcggcgggcgcaaggaccggagcgccaatgccggcgtcgtggcggcgataatcgtcggcacggtgctgctgctcgcggtggccgcggtcgcgacgtggcgggcgtggtcgaggtggcaggaggacaacgccagggtggcggccgacgacgagagcggcagcctcgagtcggcggcgaggtcaacgctggtgctcctcttcgccaacgacgacgacaatggcaatggcgacgacggcgagaggacgatgacgctggacgacgtgctgaaggcgacgggcaacttcgacgagacccgcatcgtggggtgcggcgggttcgggatggtgtaccgcgcgactctcgccgacgggcgggaggtggcggtgaagcggctctccggcgacttctggcagatggagcgcgagttccgcgccgaggtggagaccctctcccgcgtccgccaccgcaacctcgtcacgctgcagggctactgccgcgtcggcaaggaccgcctcctcatctacccctacatggagaacggcagcctcgaccactggctgcacgagcgcgccgatgtcgagggcggcggcgcgctgccatggccggcgcggctgagcatcgcgcgcggcgcggcgcgcgggctggcgcacctgcacgcgacgtcggagccgcgcgtcctccaccgcgacatcaagtcgagcaacatcctcctcgacgcccgcctggagccgcgcctcgccgacttcggcctcgcgcggctggtgcgcgcgcacgacgacacgcacgtcaccaccgacctcgtcggcacgctgggctacatcccgccggagtacggccactcgtcggtggccacctaccgcggcgacgtctacagcctcggcgtcgtgctgctcgagctggtgaccgggcggcggcccgtcgacatggcgaggcccgccggcggcggccgcgacgtgacgtcgtgggcgctccgcatgcggcgggaggcgcggggcgacgaggtggtcgacgccagcgtcggcgagaggcggcaccgcgacgaggcctgcagggtgctcgacgtcgcgtgcgcctgcgtcagcgacaaccccaagtcacggccgacggcgcagcagctggtggagtggctggacgccatcgccgccgccgccgccgactga</cdnaseq>

Protein Sequence

<aaseq>MGSRGGALPVAVLVLLLLLVLKNGAAQSRCSSGDLAALRGFSAG LDGGVDGWPAGVGNASSSSTSDGGDCCAWRGVACDEAGEVVGVVLPNATLRGVVAESL AGLAALRVLNLSSNALRGALPAGLLRLRALQVLDVSVNALEGAVAAAAVVDLPAMREF NVSYNAFNGSHPVLAGAGRLTSYDVSGNSFAGHVDAAALCGASPGLRTLRLSMNGFSG DFPVGFGQCRSLVELSLDGNAIAGALPDDVFGLTSLQVLSLHTNSLSGHLPPSLRNLS SLVRLDVSFNNFTGDLPDVFDAVPGLQELSAPSNLLTGVLPATLSRCSRLRILNLRNN SLAGDIGLDFRALQSLVYLDLGVNRFTGPIPASLPECRAMTALNLGRNNLTGEIPATF AAFTSLSFLSLTGNSFSNVSSALRTLQGLPNLTSLVLTKNFHGGEAMPTDIAGFAGIE VLVIANGELHGAIPAWLAGLSKLKVLDLSWNHLAGPIPPWLGELDRLFYLDVSNNSLH GEIPLKLAWMPALMAGGDGSDEAHVQNFPFFIRPNSSARGRQYNQVSRFPPSLVLARN NLTGGVPAALGALTRVHVVDLSWNALSGPIPPELSGMSSVESLDVSHNALSGAIPPSL ARLSFLSHFDVAYNNLSGEVPVGGQFSTFSRADFDGNPLLCGIHAARCAPQAVDGGGG GGRKDRSANAGVVAAIIVGTVLLLAVAAVATWRAWSRWQEDNARVAADDESGSLESAA RSTLVLLFANDDDNGNGDDGERTMTLDDVLKATGNFDETRIVGCGGFGMVYRATLADG REVAVKRLSGDFWQMEREFRAEVETLSRVRHRNLVTLQGYCRVGKDRLLIYPYMENGS LDHWLHERADVEGGGALPWPARLSIARGAARGLAHLHATSEPRVLHRDIKSSNILLDA RLEPRLADFGLARLVRAHDDTHVTTDLVGTLGYIPPEYGHSSVATYRGDVYSLGVVLL ELVTGRRPVDMARPAGGGRDVTSWALRMRREARGDEVVDASVGERRHRDEACRVLDVA CACVSDNPKSRPTAQQLVEWLDAIAAAAAD</aaseq>

Gene Sequence

<dnaseqindica>144..3326#gtgcaagcatgaagcttagcaagctcaagctggatcggatcatctgatgtgaattctctctcacaccaattcaccatggatggatgcccatgaccatccttagctccaggaagaagaagaagaagtgaacagtagctatagccatgggaagcagaggaggagctttacctgttgctgtactggtgctgttgctactgctggtgctcaagaacggcgccgcccagtcgcggtgcagctccggcgacctcgccgcgctgcgtggcttctcggccggtctcgacggcggcgtcgacgggtggccggcgggggtcggcaacgcgtcgtcgtcgtcgacatcggacggtggcgactgctgcgcgtggcgcggcgtggcgtgcgacgaggcgggggaggtcgtcggcgtggtcctgcccaacgcgacgctccggggagtggtggccgagtcgctcgccggcctcgccgcgctccgggtgttgaacctgtcgagtaacgcgctccgtggcgcgctcccggcggggctcctccggctgcgggcgctccaggtgctcgacgtcagcgtcaacgcgctggagggggcggtggcggcggcggccgtcgtcgacctcccggcgatgcgcgagttcaatgtctcgtacaacgcgttcaacggcagccaccccgtgctcgccggcgccggcaggctcacgtcgtacgacgtctccgggaacagcttcgccggccacgtcgacgccgccgccctgtgcggcgcgtcgccggggttgcggacactacggctctcgatgaacggcttctccggcgatttccccgtggggttcgggcaatgccggtcgctcgtggagctctcgctcgacggcaacgccatcgccggggctctccccgacgacgtgttcggcctgacgtcgctgcaggtcctcagcctccacaccaactcgctctccggccacctgccgcccagcctgcgcaacctcagcagcctcgtccgcctcgacgtctccttcaacaacttcaccggcgacctccccgatgtgttcgacgcggtccccggtctccaggagctctcggcgccgtccaacctgctcaccggcgtactccccgccacgctgtcgcgatgctcccgcctccgcatcctcaacctgcggaacaactcgctcgccggagacatcggcctcgacttccgcgccctccagagcctcgtgtacctcgacctcggcgtcaaccgcttcacggggccaatcccggcgagcctcccggagtgcagggccatgacggcgctaaacctcggccggaacaacctcaccggcgagataccggcgacgttcgccgcgttcacgtcgctgtccttcctctccctcaccgggaacagcttctccaacgtctcgtcggcgctgcggactctgcagggtttacccaacctgacgagcctggtgctcactaagaacttccacggcggcgaggcgatgccgaccgacatcgccgggttcgccggcatcgaggtgctcgtcatcgccaacggcgagctgcatggcgccataccggcgtggctcgcaggcctcagcaagctcaaggtgctcgacctgtcgtggaaccacctcgccggcccgatcccgccatggctcggcgagctcgaccgcctcttctacctcgacgtatcgaacaactccctccacggcgagatacctctcaagctggcgtggatgccggcgctcatggccggcggcgatggcagcgacgaggcgcacgtgcagaacttccccttcttcatacgccccaactcgtcggcgagggggaggcagtacaaccaggtgagccggttcccgccgtcgctggtgctggcgcggaacaacctcaccggcggcgtcccggcggcgctcggggcgttgaccagggtgcacgtcgttgacctgagctggaacgcgctgtcggggccgatcccgccggagctgtcgggcatgtcgagcgtcgagtcgctcgacgtgtcgcacaacgcgctctccggcgccatcccgccgtcgctggcgcggctcagcttcctctcccacttcgacgtcgcgtacaacaacctctccggcgaggtccccgtcggcgggcagttctccacgttctcccgcgccgacttcgacggcaaccccttgctctgcggcatccacgcggcgcggtgcgcgccgcaggccgtggacggcggcggcggcggcgggcgcaaggaccggagcgccaatgccggcgtcgtggcggcgataatcgtcggcacggtgctgctgctcgcggtggccgcggtcgcgacgtggcgggcgtggtcgaggtggcaggaggacaacgccagggtggcggccgacgacgagagcggcagcctcgagtcggcggcgaggtcaacgctggtgctcctcttcgccaacgacgacgacaatggcaatggcgacgacggcgagaggacgatgacgctggacgacgtgctgaaggcgacgggcaacttcgacgagacccgcatcgtggggtgcggcgggttcgggatggtgtaccgcgcgactctcgccgacgggcgggaggtggcggtgaagcggctctccggcgacttctggcagatggagcgcgagttccgcgccgaggtggagaccctctcccgcgtccgccaccgcaacctcgtcacgctgcagggctactgccgcgtcggcaaggaccgcctcctcatctacccctacatggagaacggcagcctcgaccactggctgcacgagcgcgccgatgtcgagggcggcggcgcgctgccatggccggcgcggctgagcatcgcgcgcggcgcggcgcgcgggctggcgcacctgcacgcgacgtcggagccgcgcgtcctccaccgcgacatcaagtcgagcaacatcctcctcgacgcccgcctggagccgcgcctcgccgacttcggcctcgcgcggctggtgcgcgcgcacgacgacacgcacgtcaccaccgacctcgtcggcacgctgggctacatcccgccggagtacggccactcgtcggtggccacctaccgcggcgacgtctacagcctcggcgtcgtgctgctcgagctggtgaccgggcggcggcccgtcgacatggcgaggcccgccggcggcggccgcgacgtgacgtcgtgggcgctccgcatgcggcgggaggcgcggggcgacgaggtggtcgacgccagcgtcggcgagaggcggcaccgcgacgaggcctgcagggtgctcgacgtcgcgtgcgcctgcgtcagcgacaaccccaagtcacggccgacggcgcagcagctggtggagtggctggacgccatcgccgccgccgccgccgactgacacgaagcagcacggcgttagtatatgaac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0116700, RefSeq:Os02g0116700