Os02g0117100

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0117100| Description = Conserved hypothetical protein| Version = NM_001052219.1 GI:115443808 GeneID:4328085| Length = 4297 bp| Definition ...")
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Gene Name

Os02g0117100

Description

Conserved hypothetical protein

Version

NM_001052219.1 GI:115443808 GeneID:4328085

Length

4297 bp

Definition

Oryza sativa Japonica Group Os02g0117100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:896074..900370

Sequence Coding Region

896128..896429,896578..896608,896903..896995,897096..897158,897279..897390
,897947..898032,898845..898903,898990..899092,899182..899242
,899472..899554,899635..899715,900018..900077

Expression

GEO Profiles:Os02g0117100

Genome Context

<gbrowseImage1> name=NC_008395:896074..900370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:896074..900370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacacccgcgccgctctccggcctccgcccgcgcgctcccgctcccgctcccgcggcgcgcagtcgcctgtgcggccagtcgccgccggtcgtggccccgcggctcggggcgttcccgcggcggcgtggtggggcggcacggtgctcgccgcgcgccgaggccggggacgtggaggcgcttagggcgggggtgtcggtgtacaagccgcggtcctacgacgtgctcgtctccgacgccgcccgctccctcgcctgcgccatggacgagggcaagacccgcctcgagatcgagttcccgcctctgccgagcaacatctcttcttacaagggttcctcggacgagttcatcgacgccaacatccagcttgctcttgctgttgccagaaaacttaaggaactcaaggggactagatcttgtattgtgtttcctgacctaccagaaaagcgcagggcatcccagttgttcgggactgctctagactcgattgagactgcaactatcagttccctggatgaggtatctaccggacctgttaataccttcttcagatcaatgagagataccctggattttgactttgctgacgatgttgaagatcgatggaaatctgatgaaccaccatcgctatatatcttcatcaattgcagcacacgtgacctttcaactatagagaagtatgtggaacaatttgcctcatctgtcccagcccttctctttaatcttgaactagataccttgcgctctgacttggggcttctgggattcccaccaaaagatttgcattacagatttctttctcagtttaccccagtattttatatcaggcagcgtgactactctaagacaattgcagtcactccatatatcgtgaactacagtggtgctgtattccgtcaatacccagggccctggcaggtcatgcttaagcaagccgatggttcttatgcatgtgttgcagagagtgcagctcggttcactttgggacaggctaaggaagaactgttaagagttcttggtttgcaagaagaacaaggaagctcactagaatttctcagaagaggatacaagaatgctacttggtgggaagagaatgttgatcaggagaaatcgtcagcatggcgaacttga</cdnaseq>

Protein Sequence

<aaseq>MATPAPLSGLRPRAPAPAPAARSRLCGQSPPVVAPRLGAFPRRR GGAARCSPRAEAGDVEALRAGVSVYKPRSYDVLVSDAARSLACAMDEGKTRLEIEFPP LPSNISSYKGSSDEFIDANIQLALAVARKLKELKGTRSCIVFPDLPEKRRASQLFGTA LDSIETATISSLDEVSTGPVNTFFRSMRDTLDFDFADDVEDRWKSDEPPSLYIFINCS TRDLSTIEKYVEQFASSVPALLFNLELDTLRSDLGLLGFPPKDLHYRFLSQFTPVFYI RQRDYSKTIAVTPYIVNYSGAVFRQYPGPWQVMLKQADGSYACVAESAARFTLGQAKE ELLRVLGLQEEQGSSLEFLRRGYKNATWWEENVDQEKSSAWRT</aaseq>

Gene Sequence

<dnaseqindica>55..356#505..535#830..922#1023..1085#1206..1317#1874..1959#2772..2830#2917..3019#3109..3169#3399..3481#3562..3642#3945..4004#gctcgtcacttcgtctcctcctctccaccactcgtcgtcgtcggcggcgtggccatggcgacacccgcgccgctctccggcctccgcccgcgcgctcccgctcccgctcccgcggcgcgcagtcgcctgtgcggccagtcgccgccggtcgtggccccgcggctcggggcgttcccgcggcggcgtggtggggcggcacggtgctcgccgcgcgccgaggccggggacgtggaggcgcttagggcgggggtgtcggtgtacaagccgcggtcctacgacgtgctcgtctccgacgccgcccgctccctcgcctgcgccatggacgagggcaagacccgcctcgagatcgagttcccgtacgcccgcgacctattcattccctttcctccatagattcgcgccaccatctcgcctaatcttttacttagttggttattaataatgcttgcattatctcatcctccttgtctcatttttttttttggtggtggtgcttgtgaaaaggcctctgccgagcaacatctcttcttacaaggtatactttgcatttctatctcaagctcgtctcataactcacactcattgttctagtttcttgctttgttatgagtgaattctgtaacaatgcaaagactaatcttgatgtatattatatagactgctctagtttcagtttgaatgctgctgctacctctgtataatgttgtttcaaagcagaatctctctttttccttggcttcaagttaaaaagggtttagcttttgttgccacatacgtgtgatgaacgcttgtttctaaccatcctaccctgctttgcttcgttttcaagggttcctcggacgagttcatcgacgccaacatccagcttgctcttgctgttgccagaaaacttaaggaactcaaggggactagatcttgtattgtaagttcaagtttcatgccttgtcctgctccagaatcattctggcatttgtgggcatatgcaaatcttttctcataaattatcttctagttgattccaggtgtttcctgacctaccagaaaagcgcagggcatcccagttgttcgggactgctctagactcggtaaataatgcctcatgaaacaaaatatcttaagaggatgcaaaaaattgttttttcccctcatgacggtaggagcttatttggttacatttctctgttttctttttccacctcttgtagattgagactgcaactatcagttccctggatgaggtatctaccggacctgttaataccttcttcagatcaatgagagataccctggattttgactttgctgacgatgttgaaggtgaattgaccaatagctttgtctagtatggtaggagtactacattaaactattaagaaaacagaatttatatttatatgactccaagaggctgtcacgtccaagctagatgaatcctttatcgctagcattttatcagaattttcttatgtctgacctcacttcaatgttcaagccttctctatagaggagataccttggagaaccattagcctgtgatacatgataaataaaattgatttggtaaaaacatctttgtaaatttcctaaaaatgtacaagtatctcttttcgtacaaatggcaaagtctttaagttgctacttggcacagttcaaaattttaaaatagagtggaaggacatggttgatcagtgggtaattattcatatataagcattatggataattattcggtggtatattattgtgtcagattttcagcagatatttcaagtaacaaccatcagtaaaagttgaacattatcaatatgagacagatttcttataagcatccttggaaaagaaaatcataactacctggctactgtgggtacagatcgatggaaatctgatgaaccaccatcgctatatatcttcatcaattgcagcacacgtgacctttcaactatagagaagtatgtggtatgtctaaaatgatgctttgtttcttgccaacatgtatgcaaatgtactttttggaatgcttggtttgcattgttgtgttttggccatcatttggccagttaggtatttattattctactgttaataaacgatcatgttctgagcttgatggatatcactatgaatagaaactgaagaaagaaagttgaggaaggcatgcacagctgcaaataagccttatatgattgccacacgatttactattctactatctctatcccataatataaggcgtgcacacattccaagattcaactttaaaaacatttgaccaacaattattataatataaattaaattttatttgttaaaattaatatcattggattgacatttaaatttactttaagatgattataattttgttgcaataaaccttataatatatgagaaattttaagtcaaagattacttttgaagactgcaccaagtttgaccatgccttatattatgggatggagggagtatatcaagtgcctgatatctaagaaaatgcaaggaattttgaatcaacaccacaacctacagagtttctctttcattttccattcacttgtatattgtagttctttttccctggaacaagaatgaaaattttcaaccttcgatggtggaaaatgtagaatattctttgtagtttgtcacacgtaacgtaaggaaatagcatgcaacacaaggttttgaggaataatgcattaattgtttgtttagcagttgtgttagtttgtgcatttgtttgattcattacccatcactttgctattgttcaggaacaatttgcctcatctgtcccagcccttctctttaatcttgaactagataccttgcggtatgtgtcttatatcccacctgatggcttgttccttctaaactctattgatcgccttaggataacttatgatctttatcctccagctctgacttggggcttctgggattcccaccaaaagatttgcattacagatttctttctcagtttaccccagtattttatatcaggcagcgtgactactctaaggtatccatttgttttacttttacaaacttaaccattccttttgtgtatctgaaccatctatgattagtatttctccctatactttgtagacaattgcagtcactccatatatcgtgaactacagtggtgctgtattccgtcaatacccaggtaatactttagtagaaagtatcaccagcagtacaaaattttgtttggcagtatatgtccgcttcaaaaagatcataaatttgtgcctttcaatccatcatgatatttttgtaacagaaccaaactaaatactaacatatgagaggtgcgattctgggttggcaatcgacatcatccttctcatcatccctattaggtactgatttgagtaaattatttttgtgttcagggccctggcaggtcatgcttaagcaagccgatggttcttatgcatgtgttgcagagagtgcagctcggttcactttgggacaggtcatacaaaattttgcttgcatgaattagttatgtcattttggagttgtggtgtatgatgttccgtgtttttcattcaggctaaggaagaactgttaagagttcttggtttgcaagaagaacaaggaagctcactagaatttctcagaagaggatacaaggtttgcatctttgtctcactttaattgtaaaatgcaaaaatgattagcataatcagcttcatatcatcatgctgatttcaaatgattcgttcgatgtacttctatccctgccacctcatgtgcaaactccaaattcaatatgaaagtttaaacttcattatcgtagcaggctagcagcctgtctcaaaataaaactttaagctctattatggttgcacctccaaagtaccttttgcaaatctgcatttcgtcaagagctagcattgttttaccatctaaagagttaacctgtaataatgcagaatgctacttggtgggaagagaatgttgatcaggagaaatcgtcagcatggcgaacttgaggttgaggccctgctgctgccttgtctgggtgctgatctgattggcggcgagtgcagacaggaacagaagaaaaaaatggttgtctgaaattgcagagcccaggcgacaaggatgcaaattgcctgtgctgcaattgtacattttgtgattgtaacatgttactgtgtgagtaacaggcattagagttttgagaggattttcctttctttttcgatgattatatatgtgttggactctgcttctttgaagcatgaagcaacttcacattttaaatggaaattcgtgttcatcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0117100, RefSeq:Os02g0117100