Os02g0118000

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0118000| Description = Protein prenyltransferase domain containing protein| Version = NM_001052227.1 GI:115443824 GeneID:4328094| Length = ...")
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Gene Name

Os02g0118000

Description

Protein prenyltransferase domain containing protein

Version

NM_001052227.1 GI:115443824 GeneID:4328094

Length

2926 bp

Definition

Oryza sativa Japonica Group Os02g0118000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:938375..941300

Sequence Coding Region

938530..939990

Expression

GEO Profiles:Os02g0118000

Genome Context

<gbrowseImage1> name=NC_008395:938375..941300 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:938375..941300 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcactggttaaccggccgctccctgcactgtatggaatttgcacggcctcggcgaagaccagagcttggtggctctgcagagatggcaatctcccatcaacaagtcgaatttcttgcacagagccatcgaatgggggttctgtcatggagttggaggtaatggaccgcaatgagcagacataccatgagaattcttctgcttctgaggatgaggacgatgatgaggaagaggctgtagagtggagcaaagatgagcttgatgccatctcggcactctttgaccggccgatgcgccagaagccaccaaagccgccaaacccggtgaggcagcgacctctcccgctgccactgcctcacaagacacgactgcccaatgctcctgcaccaaagcagcatatcaggctggcagcaagggctgcactttcttcacgctcttcattcagtgaccaggtgtgcaagaacccggaggtcctcattgggattgcccgggagattgcagcgctgccaccggagtctgacgtgtccattgtgctcgatcggtgggttcggttcctccggaaaggatccttgtcaatgaccattcgggagcttgggcacatggggctcccagagagggcattgcagacactttgctgggctcagaggcagactgtcgtgccactcttccccgacgaccggattctcgcttcgacaattgaggtcttggcacgcttcgaccagctgaagatggaggatgcgctagagcagtgcgtcccttcagcgagccgtgctgttcttgaagccatggtcagtgggttcatcagggcaggtaaagtaggccttgcccgaaaactcctcgagttcgccacgatcaacaagaggacactgagcccgagcgtccacgtgaagctgatgctggaggccgtccgtacgcctgagggctacgggctcgccgcggcgctgctggacgagctcggcgagaggccggagctgcacgttcggcagcaggactgcacggccgtgatgaaggtgtgcgtgaagctccggcggtacgccgccgtggagagcctgttcggctggttcagggacaccggcgggaggcccacggtggtgatgtacacggcggtgatccacagccggtgccgcgacgggcggcaccgggaggcgctgtccctggcgtgggagatggagcggcacgccggcggcctcctcgacctgccggcgtaccgggtgctggtgaagctgtgcgtggcgttgcgcgaccacgagaggggcgtccggtacttggcgaggatgaaggacgccgggttcgtcccgaccggcgacatgtacggcggcctgatcggaggctacgcggcggaggggaggatgggcaggtgccggaggctgatcagggaggcggagttggccggcgtgaagctggagaggaggctgctttcgcgcttgtctgagatgggggttgagcattctcagctctga</cdnaseq>

Protein Sequence

<aaseq>MSLVNRPLPALYGICTASAKTRAWWLCRDGNLPSTSRISCTEPS NGGSVMELEVMDRNEQTYHENSSASEDEDDDEEEAVEWSKDELDAISALFDRPMRQKP PKPPNPVRQRPLPLPLPHKTRLPNAPAPKQHIRLAARAALSSRSSFSDQVCKNPEVLI GIAREIAALPPESDVSIVLDRWVRFLRKGSLSMTIRELGHMGLPERALQTLCWAQRQT VVPLFPDDRILASTIEVLARFDQLKMEDALEQCVPSASRAVLEAMVSGFIRAGKVGLA RKLLEFATINKRTLSPSVHVKLMLEAVRTPEGYGLAAALLDELGERPELHVRQQDCTA VMKVCVKLRRYAAVESLFGWFRDTGGRPTVVMYTAVIHSRCRDGRHREALSLAWEMER HAGGLLDLPAYRVLVKLCVALRDHERGVRYLARMKDAGFVPTGDMYGGLIGGYAAEGR MGRCRRLIREAELAGVKLERRLLSRLSEMGVEHSQL</aaseq>

Gene Sequence

<dnaseqindica>1311..2771#gcattttttgacggcatctcatccaggagcccaggtcggcgccgccgcacacgcgtggcggcctcgccggcgactcggctgctcagagcggcgcgaagaaaggccgcgctggagtctgcagccgctgcgtgtggcagagtagagaccagccagggagagcgcagctgtcagcaacctataccagccagtgagcttgctcgcgccgttcgccggggcgggggaagagaaccatctggcgacaaagcacaggtgaaatccagtctctgccaagcaatctctaattccccccatggttccctaattgtgtgtgtatttcccatcattagtgctgttctaattcatcatttgtgctgtttgttctcaagcgtattgctgagcgaatagaatgcccaaagtgcttctaatttgtatgcataggaattcttgacctgtcaagttacacactgcatgagttgatatgggaacgtgcggatagaaaaattcgtattttttggcgaaatttcatgaaacttgattgcatgttttgttctctgcgtttcattttggaatttggggttcaactgcagttgaaacgagtcatctcaaattcgttctgaacaattcccttcacgctgttcaaacgaaagcaaagagcctctcttataaacatgtttgcaatccggtggggatgatggcaatttcaaagcttccgaaacctgcaaggcaaaagtaaaaaatttcacattggaaagctggcttgatttgaaagccctataattttttttagtataaaatctctgtttcgaagtcaaacaattctgatcctgagtaggaatcactgatttgctaagctgaaatctgaatttgtttttgcactgaaattttatttggaaattgctcaaaaagaaagtccagtacatgtttagaaaattcctgatttcaggaaacttttaagccgaaaacctgagttggaagttgttcttgggaatttaccaattagtgtttttttgtaattataaatacaaatagtaaggacaacaaaatcctcccgctactttgtgacctaactgttggtttgcatattagaaacacccctcgtgctaaatccagtagtttatgttgtctgttagtttttgaggcaaacttctatatttgtgcaggtggctgtgatgggaacataagagaggctcttatgaacttctaattcatactagtagtatatttatgcttattatacatgctgacttgcaaccttttgctttatcatgctactatctggaatcaatattgttctaagtaacaacattttgcctaatcttaaaacaggaagcatgtcactggttaaccggccgctccctgcactgtatggaatttgcacggcctcggcgaagaccagagcttggtggctctgcagagatggcaatctcccatcaacaagtcgaatttcttgcacagagccatcgaatgggggttctgtcatggagttggaggtaatggaccgcaatgagcagacataccatgagaattcttctgcttctgaggatgaggacgatgatgaggaagaggctgtagagtggagcaaagatgagcttgatgccatctcggcactctttgaccggccgatgcgccagaagccaccaaagccgccaaacccggtgaggcagcgacctctcccgctgccactgcctcacaagacacgactgcccaatgctcctgcaccaaagcagcatatcaggctggcagcaagggctgcactttcttcacgctcttcattcagtgaccaggtgtgcaagaacccggaggtcctcattgggattgcccgggagattgcagcgctgccaccggagtctgacgtgtccattgtgctcgatcggtgggttcggttcctccggaaaggatccttgtcaatgaccattcgggagcttgggcacatggggctcccagagagggcattgcagacactttgctgggctcagaggcagactgtcgtgccactcttccccgacgaccggattctcgcttcgacaattgaggtcttggcacgcttcgaccagctgaagatggaggatgcgctagagcagtgcgtcccttcagcgagccgtgctgttcttgaagccatggtcagtgggttcatcagggcaggtaaagtaggccttgcccgaaaactcctcgagttcgccacgatcaacaagaggacactgagcccgagcgtccacgtgaagctgatgctggaggccgtccgtacgcctgagggctacgggctcgccgcggcgctgctggacgagctcggcgagaggccggagctgcacgttcggcagcaggactgcacggccgtgatgaaggtgtgcgtgaagctccggcggtacgccgccgtggagagcctgttcggctggttcagggacaccggcgggaggcccacggtggtgatgtacacggcggtgatccacagccggtgccgcgacgggcggcaccgggaggcgctgtccctggcgtgggagatggagcggcacgccggcggcctcctcgacctgccggcgtaccgggtgctggtgaagctgtgcgtggcgttgcgcgaccacgagaggggcgtccggtacttggcgaggatgaaggacgccgggttcgtcccgaccggcgacatgtacggcggcctgatcggaggctacgcggcggaggggaggatgggcaggtgccggaggctgatcagggaggcggagttggccggcgtgaagctggagaggaggctgctttcgcgcttgtctgagatgggggttgagcattctcagctctgaaagaaagaaactgatcttgctgttggcatctgactagcatggacattgcacagaaattgaactgtaaaattaggctctgcgtaattgcctttaacctgtagtaacagaacattacattatgaatatatttgttttgttgttggcttgttatcctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0118000, RefSeq:Os02g0118000