Os02g0120100

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Revision as of 02:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0120100| Description = Amino acid-binding ACT domain containing protein| Version = NM_001052241.1 GI:115443852 GeneID:4328109| Length = 604...")
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Gene Name

Os02g0120100

Description

Amino acid-binding ACT domain containing protein

Version

NM_001052241.1 GI:115443852 GeneID:4328109

Length

6045 bp

Definition

Oryza sativa Japonica Group Os02g0120100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1050786..1056830

Sequence Coding Region

1051121..1051192,1051378..1051512,1052343..1052396,1052501..1052581,1052667..1052761
,1052877..1053053,1053139..1053212,1053346..1053453,1053543..1053718
,1053952..1054002,1054154..1054264,1054493..1054547,1055667..1055789
,1055922..1056007,1056235..1056349,1056429..1056667

Expression

GEO Profiles:Os02g0120100

Genome Context

<gbrowseImage1> name=NC_008395:1050786..1056830 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1050786..1056830 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtggaggagtcgccgccgccgccgccgtcgtccccgccgccgccgccgtcgtccccgcagccagcggcggaggtcggcgcggggggacggcgcgcggacaagagcgggcgccgcctcgaggtgtacagcgaggtactcgcccgcctccggggcctcggcgccgccgcccccgtcgagatctcgccggcctacgaggacgcgctctgggcccacttccaccgcctccccgcccggtacgcgctggatgtgcacgcggatagggcggaggacgtggtgacgcaccaccggttgctggaggaggcgcgcgatccggaccggcggcccgccttgtcggtgcgcgtcgtccaggtttctaggattcttgatggtgatatggatgattgttctgagcttgggatggagccggttcataccaaccacttggcaagacaaatggttcatccccctcctgcctttggttcttgctccaacttagaggcacttgcgctcgaggcgagtgaggctaatctaaggagcagtaacaatgatgaagatagcagtgttcatctcatttccaggccaatgcatgagataacttttgcaacaactgataagccaaaggtccttagtcagctgacttgcttgcttagtgagcttggtcttgacatccaagaagcgcatgcattttcaacaagtgatggttactcattggatgtatttgttgtcactggttggcaccttgggggtactgagcagctaaaagaaaagttgctggagaagtttcatgacattgagacacaagcttggccaacatcaaactcatcgtcacaatcattggaaggtccgtcaggtggagagagtatgccatctaccagtgtggaaataccaacagatgggacggatgtttgggagatagatctcaagcttctcaagtttggaaccaaggttgcttctggatcaaatggcgatctgttccgtggatcatactgcagtcaggatgtagctattaaagtagtgagacctgaacgcattagtgcagatatgtaccgtgattttgcacaggaagtctacattatgagaaaggtccgccatagaaatgttgtacagtttatcggtgcctgtacaagacagcccaacttatatattgtaacagatttcatgtcaggaggtagtctgcatgattaccttcataaaaagaacaattctttcaagctatccgaaatactgagagtggcgacagatatctctaaaggaatgaactatctgcatcagaacaacataattcaccgtgatctcaagacagcgaatcttcttatggatgaaaacaaggtcgtaaaggttgcagattttggtgttgcacgtgtcaaagatcaatccggagtgatgactgcagagactggaacttatcgttggatggcacctgaggtcattgaacataagccctatgatcataaagcagatgtttttagctttggtattgttctatgggagctgctaactggcaagataccctatgagtacctaacaccactacaagcagccataggtgttgttcagaagggccttagaccaacaattccgaaagatacgcaccccaagctgtctgagctgcttcagaaatgctggcatagagatcctgctgaaaggcctgacttctcccagatactggagattcttcagagactccccaaagaggtgagagctgataccgagggtcgccagaaatcaaaggcaggatttctttcagcattgaagagaaaccactga</cdnaseq>

Protein Sequence

<aaseq>MAVEESPPPPPSSPPPPPSSPQPAAEVGAGGRRADKSGRRLEVY SEVLARLRGLGAAAPVEISPAYEDALWAHFHRLPARYALDVHADRAEDVVTHHRLLEE ARDPDRRPALSVRVVQVSRILDGDMDDCSELGMEPVHTNHLARQMVHPPPAFGSCSNL EALALEASEANLRSSNNDEDSSVHLISRPMHEITFATTDKPKVLSQLTCLLSELGLDI QEAHAFSTSDGYSLDVFVVTGWHLGGTEQLKEKLLEKFHDIETQAWPTSNSSSQSLEG PSGGESMPSTSVEIPTDGTDVWEIDLKLLKFGTKVASGSNGDLFRGSYCSQDVAIKVV RPERISADMYRDFAQEVYIMRKVRHRNVVQFIGACTRQPNLYIVTDFMSGGSLHDYLH KKNNSFKLSEILRVATDISKGMNYLHQNNIIHRDLKTANLLMDENKVVKVADFGVARV KDQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFGIVLWELLTGKIPYEYLTPLQA AIGVVQKGLRPTIPKDTHPKLSELLQKCWHRDPAERPDFSQILEILQRLPKEVRADTE GRQKSKAGFLSALKRNH</aaseq>

Gene Sequence

<dnaseqindica>5639..5710#5319..5453#4435..4488#4250..4330#4070..4164#3778..3954#3619..3692#3378..3485#3113..3288#2829..2879#2567..2677#2284..2338#1042..1164#824..909#482..596#164..402#gtttgtgtctataaagttgtggactttctcgccgccattgtcacgtctcacgtgcgcgccaccaccaccccatgcagacccagcagcagtagcggcacggctctcctctctcgtctcgtgcaccacgccgccgcgcgcgctcgctttgcttcgagagtaatcgatggccgtggaggagtcgccgccgccgccgccgtcgtccccgccgccgccgccgtcgtccccgcagccagcggcggaggtcggcgcggggggacggcgcgcggacaagagcgggcgccgcctcgaggtgtacagcgaggtactcgcccgcctccggggcctcggcgccgccgcccccgtcgagatctcgccggcctacgaggacgcgctctgggcccacttccaccgcctccccgcccggtgagatctcttctcctgccctctctctccccctccctccccctccccgacttccctcatggccatggcgggcgtgcaggtacgcgctggatgtgcacgcggatagggcggaggacgtggtgacgcaccaccggttgctggaggaggcgcgcgatccggaccggcggcccgccttgtcggtgcgcgtcgtccaggtgagagagatccatccatggctgcctgcatgtcggtcgatttcgcgtactgcttaatttccattagatttttatttctctcctgtggtgttgctcggggaatttgatttgtgctgtctcatgttgttcattagatcaaactgaagagtagagcttagatgttgcatcaaactgaagagacattttaattccttggcttaccaaactttgttttctgcttgatctaggtttctaggattcttgatggtgatatggatgattgttctgagcttgggatggagccggttcataccaaccacttggcaagacaaatgtatgcatgatctatctatctatctatctatatgcacatgaagttcgtttactttcatgcatgtgtctccttggctgttcttgtcttttatgcacgctaatggagtaatggtgactacacaaatcgtttcagggttcatccccctcctgcctttggttcttgctccaacttagaggcacttgcgctcgaggcgagtgaggctaatctaaggagcagtaacaatgatgaagatagcagtgttcatctcatttccaggtagataattccccttttcagttcacgtgtacctcgctttattttgagtttagggcccctttgatttgaatgaaaaacataggatttttgtaagattcaaatcctataggttttttttcctatctggccctttgaaacaaatgattgaaaactgttgaatcctatgaaattcttaaggaatgctctattccatacaagttttggaggatttttaacatgaggtccaacctcatggaaagttttctatgagtctatctctctcattcaatttttgaatttttcctgtgttttacaatcctctattttgcgtttgaattcctatcgaaattctgtgtttttcctattcctttgttttctcaatcccgtgtttcagaggagcccactgtatttgtctttggttcttttggttcatgtgccattctgtacaatcatagcgtgcttagcactagcttgtagtcttgtactactaccttacaaggttggcatgtcggcatgttgcgattcccttttaaaaactgtttttgatacttctctatatcaattaattaacatggtatattgtgttacaaccagaaaatcgcatattttaccttgtgaagaatgcatgcctctgtggcctattttttaacaaatgatagcatcagtggattagttgttactaacagttagctgcaaaaccatgatatgcagaatttcctttccgaatatggtactttctctggcaatattgcatttgcatacttgtttagatgtacaagacatttcacaaaaagccgatgccacgcatgagcttctttgttatgcgctggtttgatcatgtagtgagtggattatgaaattgtcaaaagtactcataattggtgggagtagttcatttttccaacttaagcctttattccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgatgttaatgaatctagacatgatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtatttatgggcattttcattaggattatgcaaatagttgattaatacttggattctatatattctcattctagttgattaattctcgctatattctgaatcttgcaggccaatgcatgagataacttttgcaacaactgataagccaaaggtccttagtcaggtaggcatacttctttcaatacaatcttaacaaagcgaaggaaattcaaaagctgacaagtagctagttaggaaaatcattagtaaaaataaatggacatatttatttagaaaaaaagattaaaaaaacattacaaatctgtttaatgtgaacttcaaggcaattttatacaggacttatgtcagcaattgttttgattcttacactttgcctttcatacacttgcagctgacttgcttgcttagtgagcttggtcttgacatccaagaagcgcatgcattttcaacaagtgatggttactcattggatgtatttgttgtcactggttggcaccttggggtacgcacccagcataatagtgttactgtgttagtttgtcttgtccttattgcaattggtctttagagctaaacgcttcagtagttcagttagttcagtaacatacttcacttttcgtgttgataatttgctcttttgatgcacactgcagggtactgagcagctaaaagaaaagttgctggagaagtttcatgacattgaggtataagcttcccctcactttcttctatgaagttcaacgaaaaaaaaaactcattctcgtggtattaattgttgcctgaaaatatggtacctggacctgaaaaaggaatgcagaacattattttcctaaccagtacttgccttgttcattgcactcataaaaatcttgtaaggtctattgaattcctcagataaaaaacatttgttttagttttattttggtttcgtgtacagacacaagcttggccaacatcaaactcatcgtcacaatcattggaaggtccgtcaggtggagagagtatgccatctaccagtgtggaaataccaacagatgggacggatgtttgggagatagatctcaagcttctcaagtttggaaccaaggttgcttctggatcaaatggcgatctgtaagttccattatctttgtcgggaagtgaaaacaatataattttacacaactggggattgagtgccatttgatgctttgctttctcaggttccgtggatcatactgcagtcaggatgtagctattaaagtagtgagacctgaacgcattagtgcagatatgtaccgtgattttgcacaggaagtctacattatgaggttaacttaatatttttttattgcttctcccatttatcgagcattttctggtgtttagcatttggcaaatcatatgcatattgactttattgactgtaccaaattgtttcttacaaaatctacatgcttgcagaaaggtccgccatagaaatgttgtacagtttatcggtgcctgtacaagacagcccaacttatatattgtaacaggtatattacaacggtttaacttataatctttgtagacaaacttctgtagtgtttgacacactctaatttgcattcattttcttagatttcatgtcaggaggtagtctgcatgattaccttcataaaaagaacaattctttcaagctatccgaaatactgagagtggcgacagatatctctaaaggaatgaactatctgcatcagaacaacataattcaccgtgatctcaagacagcgaatcttcttatggatgaaaacaaggctagttttttctcatccataatctcatccataatgctatatgatttacagagtgtgcagagtgatatttgctcctgtcattgaacttctaaatgagagcgatcatatttttcaggtcgtaaaggttgcagattttggtgttgcacgtgtcaaagatcaatccggagtgatgactgcagagactggaacttatcgttggatggcacctgaggtgcctgttatacatacgctcattccataagaataacaacagcatttttgtttattctaacatttgtattctattgtaactacaggtcattgaacataagccctatgatcataaagcagatgtttttagctttggtattgttctatgggagctgctaactggcaaggtaactacaaattgctccaggaaaaagtcaatttctttctttctttttccaacttatattaattacatataaaactaaactcacctaactattcaatttctcagataccctatgagtacctaacaccactacaagcagccataggtgttgttcagaaggtaagcaagcatccctgcttaaattctgtagttacatgcgtggtatccgtagtatttagctcaaaaatttaaaatgttgatgaaacccattgtatagctatgtcctgtgggtgctggatttctttagttcaagtgggggacatgtgtgatgctctaaggatacagtagtttcgagaagcagtctttaaaaaatgatggcatccttgttctttcaagaaaccattcttttaatatgcgattgcctccctttgtgtccatcctactaatcactcacctgattagaggtgcaagttaggttttcaggttaccatgctcatgggaatgagatgaagtagaacaaacttccgtcaagtcacgtcattgtagctccctcaattgtagggtcacatataatatctgcttaacatcatagattcttaccattagcagaaagtgctatgaattgcatatgaaaatgattatgaaccttgattgtaaatgaaatagttgccgtgattgccaagtaggagtagtttgaaaagacaagtattttcaagagaatataggtcctttagagacactgtacatacctagaaatttcatggaaatttattggcatatttatctatatcctcatatacatgcatatatacggtatacctgcttgatttcataaagtatggccttttttttggataaaaggcctaagataggagattgcctttggtatctaaaagagttgcaagacagcattttaacttgtacatatgtagcagagagctgctagttatttacaacaattctacacaaaattaaggttcactcatgtgtattttgatcattttctgcagggccttagaccaacaattccgaaagatacgcaccccaagctgtctgagctgcttcagaaatgctggcatagagatcctgctgaaaggcctgacttctcccagatactggagattcttcagagactccccaaagaggtcagttctaatgcacctcgactcatcaatttatcatgcatttcttaaaaattctcaagattttgttcttttacaaaaacagaaactatttgctcaatgaaattttagtttgtttcatgttcaatatcatgctccagaaaaatatatattaaattttgttttaatatcctgatttaaaaaaacaggtgagagctgataccgagggtcgccagaaatcaaaggcaggatttctttcagcattgaagagaaaccactgaaagtagcttatacaatgttggtgcatcattcaattgtagcatcccacaacaagagggaagcgcattgtggtgtacagtgattaaaaaaaaagtatttcttacgttgttgcagctttgttttttttgcttatttagtttttttttcagctttttggtttcttttgctgttgtttttcttgttctagttttgttgcattaatgagaacaagtatagaaaaaggaatgtgctgaaaagagttgtacaaattgatcctgttttcttgttcatgtctgaattccgattttctcctcctatgttgtagatgaaaatcttgtagtgtatgcctatattttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0120100, RefSeq:Os02g0120100