Os02g0121200

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Revision as of 02:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0121200| Description = Protein of unknown function DUF890 family protein| Version = NM_001052251.1 GI:115443872 GeneID:4328120| Length = 57...")
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Gene Name

Os02g0121200

Description

Protein of unknown function DUF890 family protein

Version

NM_001052251.1 GI:115443872 GeneID:4328120

Length

5739 bp

Definition

Oryza sativa Japonica Group Os02g0121200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1106261..1111999

Sequence Coding Region

1106858..1106928,1109334..1109397,1109524..1109640,1109770..1109877,1110166..1110373
,1110450..1110840,1110956..1111161,1111650..1111885

Expression

GEO Profiles:Os02g0121200

Genome Context

<gbrowseImage1> name=NC_008395:1106261..1111999 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1106261..1111999 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggggtgggaggaagcggcggcggcgggacggctcggaggcgccggcgatccacccgcgcaaccgctacgccgccgcggcgccggacttcgcgtcgctggcgtcgctctacccgtccttcgcccccttcgtctccgtctcccggggaggccgcgcctccatcgacttcaccgacttcgccgccacccgcgagctcacgcgcgtcctcctcctccacgaccacggcgtcaactggtggattccggatggacagctgtgccctactgtgccaaacagatccaattacatccactggattgaggatcttctctcatcagacctcataccaccaatatccagttcaaacaagactgtaaggggctttgacataggcacaggtgccaattgcatctaccctctgcttggggcttctttactaggctggagctttgttggatctgatgtcactgatgttgcccttgaatgggctaaaaagaatgtggagagcaatccacagctagcagctctggttgagattagaaatgcaaacaaaatgtcctgttcttctgaatctgaagcagttgatggtgaagcagccagggagaacacttcgaagccagtggatggtgtactgaggtcgaaaccatctatccttcttggcgttgtgaaggatagtgagagctttgacttctgtatgtgcaatcctcctttctttgaaagtatagaggaagctggtcttaatccaaaaacttcatgcggtggaactgctgaagagatggtttgtcctggtggtgaacaggcatttataactcgtataattgaagacagtgtttcccttaagaactctttcaggtggtttacttcgatggttggcagaaaagcaaatctaaaaatattggtttcaaaagttcgtgaagctggggtgtcagttgtgaaaactactgaattcgtgcaaggtcaaacagctagatggggccttgcatggtcattcattgctccaaggaaaatggtcattagatccagtacacctggaaaagccaactattcttttatgcttcaaggccttcgacgtgaatatggtgcatttcaagtgctgaagtcagctgagagctttttccatgcttctaatctatcgtgtaaaactgattcttcattattttctattgatgttaccttatcagatgagcaggctcaggctgcaatgttgcacgatgaatctggttctgtagaaggcaactctacaaagcttcatagtggtgttactggaacatccttccgtatttcggtgtttgaacaaatgccaggcacactcctagtcagaggttcattattgaacaaagcactgtcaggtatcttctcatcgacattctcacaactagaggacacattaaagatggaattcctcagcaaggcacggtag</cdnaseq>

Protein Sequence

<aaseq>MGGGRKRRRRDGSEAPAIHPRNRYAAAAPDFASLASLYPSFAPF VSVSRGGRASIDFTDFAATRELTRVLLLHDHGVNWWIPDGQLCPTVPNRSNYIHWIED LLSSDLIPPISSSNKTVRGFDIGTGANCIYPLLGASLLGWSFVGSDVTDVALEWAKKN VESNPQLAALVEIRNANKMSCSSESEAVDGEAARENTSKPVDGVLRSKPSILLGVVKD SESFDFCMCNPPFFESIEEAGLNPKTSCGGTAEEMVCPGGEQAFITRIIEDSVSLKNS FRWFTSMVGRKANLKILVSKVREAGVSVVKTTEFVQGQTARWGLAWSFIAPRKMVIRS STPGKANYSFMLQGLRREYGAFQVLKSAESFFHASNLSCKTDSSLFSIDVTLSDEQAQ AAMLHDESGSVEGNSTKLHSGVTGTSFRISVFEQMPGTLLVRGSLLNKALSGIFSSTF SQLEDTLKMEFLSKAR</aaseq>

Gene Sequence

<dnaseqindica>5072..5142#2603..2666#2360..2476#2123..2230#1627..1834#1160..1550#839..1044#115..350#cgagcttttctacccgacctgcgccgccgcgccgctcgccgtcgcttcccccgcggcgcttcggggctccggcgatctctgctcgagctctgccgccgttggtccatccacgtcatggggggtgggaggaagcggcggcggcgggacggctcggaggcgccggcgatccacccgcgcaaccgctacgccgccgcggcgccggacttcgcgtcgctggcgtcgctctacccgtccttcgcccccttcgtctccgtctcccggggaggccgcgcctccatcgacttcaccgacttcgccgccacccgcgagctcacgcgcgtcctcctcctccacgaccacggcgtcaactggttggtactaattacactctctgggctcacttccctgaaccctaatccgtctgtgcttctagtgcatcccggtattgctctgctgaagaatcactagggtaccactcaattcagccatccgcagcatcgagctcaagctgttgcgtctcatttgtcattctatgaactgttgatgctagttgctactatcaggagtgagcttgagggaatttgattgttctaagtaacttcagtagtttttctgatgatgctactatatcagaaatggtactattgttgcactaacagttcaaaattcaaatggcctctctgaagaagttttagctgccatgtttatttgaagagagagaatcgtgatgttcgtttgtcatgcaaaatatttactagtgctcaatatgttattggctaagtgtcatgcatatggtttgtgatcaatatcttatttaatctaatatatgaacatgacatttgtcgctaactaccgtcaggtggattccggatggacagctgtgccctactgtgccaaacagatccaattacatccactggattgaggatcttctctcatcagacctcataccaccaatatccagttcaaacaagactgtaaggggctttgacataggcacaggtgccaattgcatctaccctctgcttggggcttctttactaggctggagctttgttggatctggtatgctttagatcatgtacaatataagttttgcaaagcatcaattagagtttcttatgttagttgaacttttatttgcatttctcttttaatcggattacccctgtgtttgtagatgtcactgatgttgcccttgaatgggctaaaaagaatgtggagagcaatccacagctagcagctctggttgagattagaaatgcaaacaaaatgtcctgttcttctgaatctgaagcagttgatggtgaagcagccagggagaacacttcgaagccagtggatggtgtactgaggtcgaaaccatctatccttcttggcgttgtgaaggatagtgagagctttgacttctgtatgtgcaatcctcctttctttgaaagtatagaggaagctggtcttaatccaaaaacttcatgcggtggaactgctgaagagatggtttgtcctggtggtgaacaggcatttataactcgtataattgaagacagtgtttcccttaagaactctttcaggtgattcaaatactaacctaacatgataatagccttttaattgtctctgggctcattgttccttttattgttttaggtggtttacttcgatggttggcagaaaagcaaatctaaaaatattggtttcaaaagttcgtgaagctggggtgtcagttgtgaaaactactgaattcgtgcaaggtcaaacagctagatggggccttgcatggtcattcattgctccaaggaaaatggtcattagatccagtacacctggaaaagccaactattcttttatgcttcaagttagtatcacgtcaccttttgtccctttgattcatattatcatttacctccataaattgcacagctatttttctttagcaaccaaaagaaaaagaaatccaactcgaatcttatctaccattatgtttgtatgttcttggacaatacctgcgccctttcctcttattaataaagagctaatcagccaacttatatttatctgtgagttattgatactgagtttccactactattgcaccttctcaagcttcttcgcttcaatatctcatttacataatggctttcagggccttcgacgtgaatatggtgcatttcaagtgctgaagtcagctgagagctttttccatgcttctaatctatcgtgtaaaactgattcttcattattttctattgatgtaagattccttattaatctgccgcatattccttctgtcaaattacaccagtacacagacctttttgttgttgtacaaattctatagtgtatcgatctccaagaattgtatgaaatactcttctttcaggttaccttatcagatgagcaggctcaggctgcaatgttgcacgatgaatctggttctgtagaaggcaactctacaaagcttcatagtggtgttactggaacatccttccgtatttcggtatgcttaggataaattgaagtatattatgttcatcagttacctagttatgtttttttcctatgaacttgtcagttgtttctgtgtatatttcaaaaaaaaaatcattgtattttttccatataggtgtttgaacaaatgccaggcacactcctagtcagaggttcattattgaacaaagcactgtcaggtaatcgttgttcttcatgtgaatgatatcacatttattgtccaaacatgcagatacacctttgttggttttcatcaatgcataacatgccattttcttgatcttgtagttttgtgtaaatttcactgtatgttatatttcaattgagtgcatataccattgttgttgatttgagttccgagctattttattgagtctaatggcatcccactttgcctctggcctggccattatttatttccatgtgaaactgacagtcacggatgcttcatctgtgtgtataaaaaaactaaaaaatgggaactattgagctattaaatcatgaatgtgacatggcagcaatccatcctctgggggcttggtcgttccctctcactattgttcttccagctatctttcccacccaatgcaaccagagtgatcaccctcttgccagcaacatcaattctccagctaccatcaccttcatttgatctactcttcttttatcttgtcagatatgccaacagtgtacttgattttactgtatgcctgtagccactgtccagccacggtcgtggtgcactggtgcctggctaccaccctccctcaactaccgttggcattggcaccctgaagctatcattggctcactgctgtccatgccccaaagctttctgtcacccatcaaacccatcttcttctggcatcatgtgttaatttgtgttccagaaacctattttgcatcttaatcagacttcgagtgtatgcctcagcctagccttgttaccaacggacagagatttggagaggagttgtaagattttgtccgttccttatggtagcaggggcaaatttcagtatgaactgacataaggttactccattggtcagcttactggtgaagaaatttccagaggtagccagatttatgttgtctagtatataggtgccgaattccatgtgattcagcagacacaatgcctttgaaatagccatcttcaggagagcattcaggttaagtggtgatgagtgaatctttaagggtgatgatttttaacgaatacagcatctggcgcttaatcatgggcaccaaccagatggtctgtggccattcagaaaatacaaatgtccaccctcaagttatttagcatgcagctggctggcatgcgtggaaagagctgacttccacgttaacctagagatttggataacgtaccaaccagtttgtgaagtcagaaaggatggcatcgagtcttaaacacaagagtagcctgaaatcacttgaattcgtgcatctgcaggaaacctctcctgccactgctgcagcatgtttatgcagttccttgttccaacccctgcagtgataacctcttttatcttcccctattgccatataactccattccagattcaagcatgtataaatcccctgatgtctgtatcatcggctatttgtgtccttttaattctataggatgcataaaacactaaaagggcaagatggggagctgaaacttgattcgttatctgtactaactcttgctattcaggatgattggcacttgcttttgtagatgtgaggttgttttacagtgcataaacgctcaatcataatgaaatctgttgatcgagtagaaaattttgatccaccaaatggtgtcaaatgtacattgtacagcacgagatggagaatcctgttcatgccctcctctgccaagctgtgttggtcctatagtcatgaaacggtcctgagaattgtcttggttgtctatccagtaaaagaagggtgacagtagtactgatgcctagctggctctagcatatgaattgtcactggctctagacagctgctagtgctaattccacgatggagacatactcctaaatgacacttgaacgctagggaccattgacgcattgagagagtttggctggtaagtttgcaggaggcagagcctgtagatacggatcatatggcatgttggcattgaagctgctgcttttgttattgactgtcgactgaccgtccttgcaattgaggatacaattattcaggttgtagagggaagtaaatcaagctctatagatagtaggacaagcagacaagaatctctagctgatctttctgttaaatagagattgcttgtcatatttcaaacctggttaggttatataattgctctgttcatctctagtctatacatgtgcagcatgagcatttagctcattccctcaaattccaattgtattatgtataaccaatagtggttgcaactggatgtgaaccaaacagaacttctgcatgtatgatacttgtaccaattgcatgatagctcctctggcttactagtacatgcacaaaattagagtttttcttttatctcggtgacaatgacaaaaaagtactgttcttttgttttcaggtatcttctcatcgacattctcacaactagaggacacattaaagatggaattcctcagcaaggcacggtagttaaaggccatcattagggacttaatcatgaaccctaatcagcctaatgtttggcaatcatgaggcagccatggaccatggccttggccggtagccacagagatcacaggtgctgagctgtgatgaaaagctgcttccgctgcaggaattcttgtcgcccatcttttgcttgctggtgtgggcattcacccctggacaagcaagctatacgctgtcacggtgcttggttacaagtaacgttaaatgttttttttttttttggcggggaaagtaacgttaaatgttgccttcgctgcttatccgaaattggaaaacgactcgccgtgtgagattcttccttttccagattctgcagtgacacccacaatgaagaactgcttttgtgtcactggctgtgagatgtttgtagatgcctgaagctgtgctcaaaatatccgtagaaatacactgcatggtctgtactggatgtctggatgattgtataccaaccgtctcttgcaagttgcaacagctgtgttcattgcctctcaattctgtgatgaactgggtgttaactgtaaacttctatggtatcgatgtgagaaaagttcaaggttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0121200, RefSeq:Os02g0121200