Os02g0124700

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Revision as of 02:07, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0124700| Description = Zinc finger, RING-type domain containing protein| Version = NM_001052275.1 GI:115443920 GeneID:4328144| Length = 490...")
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Gene Name

Os02g0124700

Description

Zinc finger, RING-type domain containing protein

Version

NM_001052275.1 GI:115443920 GeneID:4328144

Length

4906 bp

Definition

Oryza sativa Japonica Group Os02g0124700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1283277..1288182

Sequence Coding Region

1283542..1283574,1284082..1284369,1284472..1284581,1285309..1285639,1285968..1286369
,1286626..1286860,1286963..1286988

Expression

GEO Profiles:Os02g0124700

Genome Context

<gbrowseImage1> name=NC_008395:1283277..1288182 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1283277..1288182 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgactgatgagattgttgaactctatctggagcttctatgtcagtacgagcgaaggtctgttttgaagtttctggagacttttgacagttacagattggagcggtgtttgcatctttgtttagattatggggttacagatgctgctgcattcttgcaagagagagttggtgatgttgggagtgcactggcacttattctagcaggtcttgatgagaaaatcaacctatttatttcttcagtggaaaatgctttctctgggattgcatcaaaaagtatatctgagatagagcagccagacattgttctaaaaatgagtgaggctcatcctgtgcttgatgcattacgtgctgccatcggattgtgtcaaaggaattcacaaagattgaacccagaggagtcccagtccctttggttccaactgcttgactccttctcagagcccctgaaaaaattgtatggaagcaaggatgtaaatggaaaaggtgtcaggtctaatgggagtgaaacatcgaatagacagccaaaggacaaaggattctcacgaaaaacaaggatttcagcttatcagaggtgcttgaatgcactgcggagagtattttcgcagtttgttggagaaataatcgaggcaatggctggacatatacccttaccagcaatcatgggaaagctattatctgacaacaggagtcaagagtttggtgattttaagctcgttatacatagaatgctgtctatgtatctttatgaaaaaagaatactggaaacagccaagtcagtaattgaggatgattcattctacaccttgagcttactaaagagaggggtttgccatggacttgctccacagacttttgtatgttgcatatgcaactgctctctttcaaaagaaagtgctgtttcagcaatacgagtattcagttgtggacatgcaactcatctccaatgtgagtctgaacaaagtaagtcatccaatagggattccaaagatggatgcccaatttgtctttcaactagtaatacacaagcccaaaacaaatcacctatatcagagaatgggcttgggaaacattttggggctgaaagcgaggtatcacatggcacctatcatactcatgaaacagatcatgtcgacagatctcgtgggcttcagcagatgtcacggtatgaaatactgaatcatcttcagaggccacagagtttgcatatagaaactgtacctccattgaggctttcaccaccagcgatatatcatgaaaagatacagaagagaacaaccacgatgggagaatccagcaagcattcagttagaactgaaaaaccccagagaatatggcaaatgaaggaaccaagatcaaaaagatcagggaaccgagttctgccaaagtcaagcatgttgagttctcagaataatcaagtgcgatag</cdnaseq>

Protein Sequence

<aaseq>MTDEIVELYLELLCQYERRSVLKFLETFDSYRLERCLHLCLDYG VTDAAAFLQERVGDVGSALALILAGLDEKINLFISSVENAFSGIASKSISEIEQPDIV LKMSEAHPVLDALRAAIGLCQRNSQRLNPEESQSLWFQLLDSFSEPLKKLYGSKDVNG KGVRSNGSETSNRQPKDKGFSRKTRISAYQRCLNALRRVFSQFVGEIIEAMAGHIPLP AIMGKLLSDNRSQEFGDFKLVIHRMLSMYLYEKRILETAKSVIEDDSFYTLSLLKRGV CHGLAPQTFVCCICNCSLSKESAVSAIRVFSCGHATHLQCESEQSKSSNRDSKDGCPI CLSTSNTQAQNKSPISENGLGKHFGAESEVSHGTYHTHETDHVDRSRGLQQMSRYEIL NHLQRPQSLHIETVPPLRLSPPAIYHEKIQKRTTTMGESSKHSVRTEKPQRIWQMKEP RSKRSGNRVLPKSSMLSSQNNQVR</aaseq>

Gene Sequence

<dnaseqindica>266..298#806..1093#1196..1305#2033..2363#2692..3093#3350..3584#3687..3712#cagggagtgcgcttttgtcttggtcattgatcatttccacgatgagatccagaaaatattatcagagcttcattctgatcaccacagcctctttcttttcttgaaaactgcgattgaagtgcacttgtcaggaaaactgaatttcagtgaactcaatgccagaaaaaatagcacagttgaacttcaatactcatcccgtgaacttgaattttatatacagagactttcaaatcttcccaagttgttggaccgcaatcctgttattatgactgatgagattgttgaactctatctggaggtaaatgtattgatttttttttttagaaaccaaatatgtcgatggacttttcaactgttcaggtcttaggtctgattgtttgttccaaatgaaaagagtctggtgaaatgtcatggctggaaaaattgtgttctttatggccacatctgctgtgtctctgtagagcatagccacaggcagtgtgccaataatagaacatgaagggtaccttgtccatcatattgcacatggtggtcaattctcttgaaggttgattgtcttatggttttgtagagctttggagtctgattacgcctgcaactgtccatgaaatcagtactttacagttctccattttgttgtgaatattatagttttgctttgtttttttgtcttatgatattgaaaattctgatatataaaagtaattgtgtgcagtatgtaattgaaattttgtggtgatcacaacaattttgtgtgttatcttcatcctaactattactaaaaaaaaaaatctttcttgcacagcttctatgtcagtacgagcgaaggtctgttttgaagtttctggagacttttgacagttacagattggagcggtgtttgcatctttgtttagattatggggttacagatgctgctgcattcttgcaagagagagttggtgatgttgggagtgcactggcacttattctagcaggtcttgatgagaaaatcaacctatttatttcttcagtggaaaatgctttctctgggattgcatcaaaaagtatatctgagatagagcagccagacattgttctaaaaatgagtgaggtctttcttttttttctcctgctcatttaaatgcttgcttggacaacctccgttgtatacatggtaagtaggtaacatattcaatatttttttattttgaaggctcatcctgtgcttgatgcattacgtgctgccatcggattgtgtcaaaggaattcacaaagattgaacccagaggagtcccagtccctttggttccaactgcttgactcgtaagttatgctaacatattaatactacgttacgttattcatatttataagtttcaaatataatttttgtcatctcagttgctggtttgttagtagcattttatgatgtaagatttttccttgttccttggaatatgaacctgtgacatcttgcaagctgttagacttctgttctaccccttctcatgaaaattgtaccgttcagttttctcactaggctgttagactgctgttctaccccttctcatgaaaattgtaccgttcagttttctcactaggcatgctcttaaacacttatagggagttgttaccatgtatacttcagatccaaatatagagggtaaattcaatgtccacatacataagtgtgcattgagagtgttgggcatgaactgatgatgctgaattgtatctattgaactttttctacagtggcctcaatttgtgagtcataacagatagtaagcatgatcagtgcctttgtccattgtgaattcagacaaaaaaaaaatcaaacaaggccttaattttttcttatgataaattttcattagattaattggcactctcaaaaggatataatcaacctataatattggaattgcataaggctttctttacagtcgtatgatttgtcatgtttgttgcttgctgtggtcatacaaagatatctgtcttgtgttctgatagatgtattgacatcaatgttgttatgttatcaattcagcttctcagagcccctgaaaaaattgtatggaagcaaggatgtaaatggaaaaggtgtcaggtctaatgggagtgaaacatcgaatagacagccaaaggacaaaggattctcacgaaaaacaaggatttcagcttatcagaggtgcttgaatgcactgcggagagtattttcgcagtttgttggagaaataatcgaggcaatggctggacatatacccttaccagcaatcatgggaaagctattatctgacaacaggagtcaagagtttggtgattttaagctcgttatacatagaatgctgtctatgtatctttatgaaaaaagaatactggtatgtccatattgatttttatcccatacgcaatttacttgctgctatagcagaccagcaatgctttaggcttttccatgctgctgtaatgtaaaatcattaggaaattcctgaagtacacatcgcttaaatgatcaacagactttagtgttgttttaaattgaacgcttgtttgctactgcaattgctggggtaaatgaacttttatattttgtttgatagaaaagagtttctagctcccttgatacccttttttagggaaacaataggggtggaccctattgaagatatatatttcttctctgatttcttatgcacctgcctgcaggaaacagccaagtcagtaattgaggatgattcattctacaccttgagcttactaaagagaggggtttgccatggacttgctccacagacttttgtatgttgcatatgcaactgctctctttcaaaagaaagtgctgtttcagcaatacgagtattcagttgtggacatgcaactcatctccaatgtgagtctgaacaaagtaagtcatccaatagggattccaaagatggatgcccaatttgtctttcaactagtaatacacaagcccaaaacaaatcacctatatcagagaatgggcttgggaaacattttggggctgaaagcgaggtatcacatggcacctatcatactcatgaaacagatcatgtcgacagatctcgtgggcttcagcagatgtcacgggtaataatatctttccacttatcatacatatgtcaactacatccaaaagtttttccaatgagtagaactgatttcagttatacttggaagccttgatcaagttataaccttgtactcttgttgaatatggcaatctactccacttttatagtattttaaatttattactgtttcatctaagctgatacgttccaagtgaacgtggcctacaggatagtactgtaattctgtaacaaatcgattctcctttttgcagtatgaaatactgaatcatcttcagaggccacagagtttgcatatagaaactgtacctccattgaggctttcaccaccagcgatatatcatgaaaagatacagaagagaacaaccacgatgggagaatccagcaagcattcagttagaactgaaaaaccccagagaatatggcaaatgaaggaaccaagatcaaaaagatcagggaaccgagttctgccaaagtcaagcatgttgagtgagtttgcgcttcacattgattaaataaataacaatggcactctatgtactccattttgaattttgtttgctctatttatgtttctttattcttctgtaggttctcagaataatcaagtgcgatagtgtaaatataatatggtatgaatttgacaattcttaaaatggtaagtggtaactctgttggtataggttttttgtctgttttttctcatgtatggagtcattattgcgattaatctttgaatccattcaaagctaattcgacattttgtggcctttggaaaaccatgtcaaatgtattgcttagcaaatcttcatggtcccacagtgtagcacagcagagcacaatgcaaggcttaaactgaacgtctgaaccttacatttttctgtaacttaataagaataatatatcatctatgttaaacctatcagaactatttagggccctcatcatcaccatgatcaatagaaaatgtgagcagaggacacctggaagttggaaatcaatttaggcatgcaaaaatgaaagcacgaataagctttgaaattgctagatctggagtaaacttgaaaatagatagtgccgtctagatttattcgcatgcagtgtttttgaactataggtggaatatcgatagggtttccaattcctattgtactggtttatacacgctgcaatcattatggatttgctctatttttctttgaagtaatagataatgagctgttttttgggttccttgctgaaaccagattcgaactgatacaaactgatttggatcgagccatcatgtttcaactttcaactgatcattgatttgccagtgtggttgtgctgctcttcctttgtactcaattctcatcttggtgatgcattaaggctgtttggagtagtgcaattcttctcccacggtacttctgttgaaggtcactatctttttttttctcttcatttggtcaatgtttttcttttctaatctcgttatctttcagctggggagatgaataccagatctcaaggcaaaggcgggagcggagaagggcaactagatcaggtgaccctgagaagctttaacttagaacacaaaaaaactaatgcgatagaaaattttttggggggcaattcatcatgaagtatttctgtacagagcgaacacgtgatgacgccatccttacacttagcattacatgactttcttgcgtttcgacttttctttttgtgtaaaatgtgaagtacacaggaactctgcgatgtatagcatatgagacattacatgattttgatcaactgagcaatgatatcaacactggtagtac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0124700, RefSeq:Os02g0124700