Os02g0131400

From RiceWiki
Revision as of 02:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0131400| Description = Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58)| Version = NM_001052326.2 GI:297598531 GeneID:43...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0131400

Description

Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58)

Version

NM_001052326.2 GI:297598531 GeneID:4328197

Length

4445 bp

Definition

Oryza sativa Japonica Group Os02g0131400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1644280..1648724

Sequence Coding Region

1644280..1645161,1645328..1645432,1646322..1646805,1647680..1647884,1648538..1648724

Expression

GEO Profiles:Os02g0131400

Genome Context

<gbrowseImage1> name=NC_008395:1644280..1648724 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1644280..1648724 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgggcggcggcggaggaggaggggagtgtcccaagtacaaggactcgaagcagccgctgaacaagaggatcgacgacctactccggcggatgacgctggcggagaagatcggccagatgtcgcagatcgagcgcgagaacgccaccttcgacgtcatgcgcaactacttcattgggagcgtgctgagcggcggcggcagcgtgccggcggcgcaggcgtcgccggcggcgtgggtgtcgatggtgaacgagatgcagcgcggcgccatggcgacgcgcctcgggatccccatgatctacggcatcgacgccgtccatggccacggcaacgtctacaaggccaccatcttcccccacaacgtcggcctcggctgcactagggacccggatctggcgaagaggatcggcgcggcggtggcggcggaggtgagggcgacggggatcccgtacgtgttcgcgccatgcgtggcggtgtgcagggacccgaggtggggccgctgctacgagagcttcagcgaggaccccagggtggtgcagcgcatgtcctccatcatctccggcttccagggcgagatccctcccggcggccgccgcggcgtccccttcgtctccggcgggaggccgagcgtggcggcgtgctcgaagcactacgtcggcgacggcggcacgacgcgcggcatgaacgagaacaacacggtggcgacgctccgggagctgatgacggtgcacatgccgccctactacagcgccgtggcgcagggggtgtccacggtgatggtgtccttctccagctggaatggcgtcaagatgcacgccaaccacttcctcatcaccgatttcctcaagtccaagctccgcttcaggggattcgttatctcggattggcaagggcttgacaggatcacgaccccagcacatgcagactacatgttgtccatcaagctgggtatcatggctggcatcgacatggtgatgatcccgttcacgtacacggagttcatcgacgacctggcggcgctggtgaagaacggcacgatcccgatgagccggatcgacgacgccgttcgccggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcctcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgtgcgcaagtcgctcgtcctcctcaagaacggcaagcccggcgacgcgccgctgctgccgctgccgaagcgggcgcgctccatcctcgtcgccggcgcccacgccgacgacctcggcagccagtgcggcggctggaccatcacctggcagggcctcgccgggaacgacctcaccgccggcggcaccaccatcctcgacggcatccgccgcgccgtggatgccgccacggaggtcgtcttcgccgaggcgcccgacgccggcttcatgcggcggaacgcggggaggttcgacgccgccgtggtcgtcgtcggcgagccgccgtacgccgagacgctcggcgacaacctgaacctgaccatcccggcgccggggccgagcgtgatccagaacgtctgcggcggcggcgtgaggtgcgtggtggtggtggtctccgggcggccgctggtgatcgagccgtacatggacgccatcgacgcgctggtggcggcgtggctgccggggacggaggggcagggcgtcagcgacgtgctgttcggcgactacgagttcaccgggaagctggcgaggacgtggttccggtcggtggagcagctgccgatgaacgtcggcgacgagcactacgacccgctcttcccattcggattcggactcgagacccgcaaagctaattaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAGGGGGGGECPKYKDSKQPLNKRIDDLLRRMTLAEKIGQM SQIERENATFDVMRNYFIGSVLSGGGSVPAAQASPAAWVSMVNEMQRGAMATRLGIPM IYGIDAVHGHGNVYKATIFPHNVGLGCTRDPDLAKRIGAAVAAEVRATGIPYVFAPCV AVCRDPRWGRCYESFSEDPRVVQRMSSIISGFQGEIPPGGRRGVPFVSGGRPSVAACS KHYVGDGGTTRGMNENNTVATLRELMTVHMPPYYSAVAQGVSTVMVSFSSWNGVKMHA NHFLITDFLKSKLRFRGFVISDWQGLDRITTPAHADYMLSIKLGIMAGIDMVMIPFTY TEFIDDLAALVKNGTIPMSRIDDAVRRILRVKFTMGLFERPYADLSLAGELGKQEHRD LARDAVRKSLVLLKNGKPGDAPLLPLPKRARSILVAGAHADDLGSQCGGWTITWQGLA GNDLTAGGTTILDGIRRAVDAATEVVFAEAPDAGFMRRNAGRFDAAVVVVGEPPYAET LGDNLNLTIPAPGPSVIQNVCGGGVRCVVVVVSGRPLVIEPYMDAIDALVAAWLPGTE GQGVSDVLFGDYEFTGKLARTWFRSVEQLPMNVGDEHYDPLFPFGFGLETRKAN</aaseq>

Gene Sequence

<dnaseqindica>3564..4445#3293..3397#1920..2403#841..1045#1..187#atggcggcggcggcgggcggcggcggaggaggaggggagtgtcccaagtacaaggactcgaagcagccgctgaacaagaggatcgacgacctactccggcggatgacgctggcggagaagatcggccagatgtcgcagatcgagcgcgagaacgccaccttcgacgtcatgcgcaactacttcattggtatacttgattgcttcttggttcttgcagcagagatacatattgattcttgcatctaaaaacaagatacacatataataagtagaatgcgaatgcaaacacctcaggaaattatatataatatctaattaatatcgatgaaagcttttgcgtgtttgaaaaaaaactataatatagtgcaggtcaaactaaaacagtttgaagtctgaagttctctaatatatatttttgacatgcaaagattttacgcgttcgtgaagaaaaagtttgaagtttgaacgaatgtctatattgtgattcggccaggagtttgtttaagctagctataacaaaataacatttcttaaagaattcgtactttgataatgggtaatgcagacaaatgtctaacgaaccagtttggtgagattgggagtcaaacactctgaatccgtatgatatggtcatggaaatatggatattataagatactaatgattttgtaaatacaaggtttgaatcttagctttcactgcaagcacaagtgagggcatgcatctccataaataaatgtaaatactaaaacagattcaaaatgaattaattaatcaaaattagctagctactcaaaccggccattaaattaagacgaatatatatctctcaaattgcagggagcgtgctgagcggcggcggcagcgtgccggcggcgcaggcgtcgccggcggcgtgggtgtcgatggtgaacgagatgcagcgcggcgccatggcgacgcgcctcgggatccccatgatctacggcatcgacgccgtccatggccacggcaacgtctacaaggccaccatcttcccccacaacgtcggcctcggctgcactaggtaataaaatgattaattatcccccttaattaaactcaattaatgatgcatgaattaagtagattcccatatgtagctagttgtgataagtttactgaagatgaccagattgcacgccattaattaatcatccaagtctttgtatataaactctcaaaatttgcagtgctcgatgatgatggagtgagatccaagatttgagattttaaattagcgcgatcgatcgctcacgtcccaacgttttggacaagggaaagagttactaattgcccaactcgccaactagtaatattttgacgttgtcactctaattaatggtttctcaaacgcgctgaatttgaaaaggaaaaaaaaagacagattcgacttgaaaaaaaacccctactatcataagagtaattttaccatctttgaaaaataaagtaccataatttttattgtaaaatttggtacatctaaatattagctagcttaagttaccaaattttattttctagtgtaaaaatctttggtatcttcagttacgttttaaaatgttcgtaaaatttctcatcatacaataatgtcgtaatcttattttaacacaagaccaatagtaatagttttctaaaagttttactggattttattcatcaccggagggagggaatatacaaagataagctagctagctagtgagagcatatgaacatggtgtgttcttctccgagagatttgatagtgtaacacttcttaaaataggtttcgattatttgacattctgacccactttcatttacttagatggctcacatatcatcatcacaagtatcaattaaaacaattgggcaacgaagaaagtgtcaaattatcaatttttttcgttcttctccagggacccggatctggcgaagaggatcggcgcggcggtggcggcggaggtgagggcgacggggatcccgtacgtgttcgcgccatgcgtggcggtgtgcagggacccgaggtggggccgctgctacgagagcttcagcgaggaccccagggtggtgcagcgcatgtcctccatcatctccggcttccagggcgagatccctcccggcggccgccgcggcgtccccttcgtctccggcgggaggccgagcgtggcggcgtgctcgaagcactacgtcggcgacggcggcacgacgcgcggcatgaacgagaacaacacggtggcgacgctccgggagctgatgacggtgcacatgccgccctactacagcgccgtggcgcagggggtgtccacggtgatggtgtccttctccagctggaatggcgtcaagatgcacgccaaccacttcctcatcaccgatttcctcaagtccaagctccgcttcagggtatgtgcactactactatatatatacttcctccgtcccaaaatatagtcattttttaggttggcacaggtattaagaaagtaaatgagaataattggagaaagtgtgtgattggttgaaaagagaaagtaggtgaagaataatggttgtgattggttgagaggaggtatgtggagaaatagctttattttaggacaagacactctgctagaaatagctacattttgggatggaggtagtatatgctatacctttgtctacaaatatatatattcccttcaccctaaaataaataaacttaatacactaaagttggatataagtcgtacgtactaggttatatcacatctccaactaaattggtttattttgaaatggagagtataaggcttaattttgatggttaaaaataaactttgaaagtaaattcctctttcgttattttatttatgaaaaataaactatggtcataacaaaaatagtctcagttttaaaatataattatttctagtatttatttttttctaaaatataagcaattcctaatagcctcttatttaaatttctttttattttagccccccaaccaccactcattcaatgagaggcacccaattattttcttggcaacttttctccactaaacaatatagaaatatttatattttaaaatagattatgtgcttttgaacatgaattcatccgtatcggtgcatgtaaaatattattattggtttaataattagtcaaagatttaaaattaattggtagtcaaactcgacttgtatttctattttctagacggtagtacatacgtgtgagatcttcatgcatatatgatgtgatctgtttaagtttgaaaattaattaatgtgttattcaatttcagggattcgttatctcggattggcaagggcttgacaggatcacgaccccagcacatgcagactacatgttgtccatcaagctgggtatcatggctggcatcgacatggtcagtacagtgcacacattaatacatgcaaaaactaatttcatcataaaattttcatttcattgataaataagagacaaatatcgatccaagaaatggtcctttacacccaaaacatttcataattaattgactgattaattttcgaatgtttgtgtgcaatcaggtgatgatcccgttcacgtacacggagttcatcgacgacctggcggcgctggtgaagaacggcacgatcccgatgagccggatcgacgacgccgttcgccggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcctcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgtgcgcaagtcgctcgtcctcctcaagaacggcaagcccggcgacgcgccgctgctgccgctgccgaagcgggcgcgctccatcctcgtcgccggcgcccacgccgacgacctcggcagccagtgcggcggctggaccatcacctggcagggcctcgccgggaacgacctcaccgccggcggcaccaccatcctcgacggcatccgccgcgccgtggatgccgccacggaggtcgtcttcgccgaggcgcccgacgccggcttcatgcggcggaacgcggggaggttcgacgccgccgtggtcgtcgtcggcgagccgccgtacgccgagacgctcggcgacaacctgaacctgaccatcccggcgccggggccgagcgtgatccagaacgtctgcggcggcggcgtgaggtgcgtggtggtggtggtctccgggcggccgctggtgatcgagccgtacatggacgccatcgacgcgctggtggcggcgtggctgccggggacggaggggcagggcgtcagcgacgtgctgttcggcgactacgagttcaccgggaagctggcgaggacgtggttccggtcggtggagcagctgccgatgaacgtcggcgacgagcactacgacccgctcttcccattcggattcggactcgagacccgcaaagctaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0131400, RefSeq:Os02g0131400