Os02g0133900

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Revision as of 02:09, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0133900| Description = Protein of unknown function DUF829, eukaryotic family protein| Version = NM_001052344.1 GI:115444058 GeneID:4328216| ...")
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Gene Name

Os02g0133900

Description

Protein of unknown function DUF829, eukaryotic family protein

Version

NM_001052344.1 GI:115444058 GeneID:4328216

Length

3608 bp

Definition

Oryza sativa Japonica Group Os02g0133900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1788746..1792353

Sequence Coding Region

1788788..1789359,1790266..1790368,1790595..1790803,1791924..1792182

Expression

GEO Profiles:Os02g0133900

Genome Context

<gbrowseImage1> name=NC_008395:1788746..1792353 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1788746..1792353 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctcctccgcccgcctcctcgccgccgcagcgcgcggccgtgccgccaccaccttccgccatgctcctaccgtctcctcctccctctcattccctcccaacccgcaccaccgcccgtccctccgcggccgcgctggcatctccttctcctccacctccatctccctcccctcgggctccccgcacggcgcctccgcccccttcaacctcttccctcccgactccgatcccttcatacagtgggaccctccccctcccgacgccgcctcgccgctcggcgccggcgccgccggccgcgaggcgcccggggacctcacgctggtcgtgctcctcgggtggctcggcgcgcggcagaagcacctgcggaggtacgccgacctctaccgcgaccgcggggtcgggtcggtgcggttcgtggtgcccgtgcgggagctcctcgggctcgacctcggccgccgcgtcgagcgcagggtcgccgacctcgccgccgagatcgccgcctggtgcgacgccgaccaccggcgcacgctcctcttccacacgttcagcaacaccggatggctcgcatatggtgctatacttgagaatctacaatcaagagctgatataattgagaggatacggggatgcattgtagattctgcaccagttctggagataagaccagaggtctgggctgctggattctctgctgccatgttgaagaaaagcagttccatgacaggaccttcagttgaatctcctgatggatatacttcaaatggcaccttgaacaaccttagctctgatgtgacgagaccaacatggggtgaaaatattcttctatctactctacagaaattcttcgagattgtccttcatctacctgatgtaaacaagaggctagaaaaggttcactcggttctttcagagaagcagcctacctgcccccagttttatctgtacagctcagcagatcgagtaatacctgctgaatgcgtcgagcgcttcatcgacatgcagaaatccctagggcagagcgtattcgcccacaattttgtgtcatcgccacatgtggaccactacaggagcttccctcatgtctacgcagcaaagatcgacgagttcctgaagatttgctccatagctagagtatga</cdnaseq>

Protein Sequence

<aaseq>MAASSARLLAAAARGRAATTFRHAPTVSSSLSFPPNPHHRPSLR GRAGISFSSTSISLPSGSPHGASAPFNLFPPDSDPFIQWDPPPPDAASPLGAGAAGRE APGDLTLVVLLGWLGARQKHLRRYADLYRDRGVGSVRFVVPVRELLGLDLGRRVERRV ADLAAEIAAWCDADHRRTLLFHTFSNTGWLAYGAILENLQSRADIIERIRGCIVDSAP VLEIRPEVWAAGFSAAMLKKSSSMTGPSVESPDGYTSNGTLNNLSSDVTRPTWGENIL LSTLQKFFEIVLHLPDVNKRLEKVHSVLSEKQPTCPQFYLYSSADRVIPAECVERFID MQKSLGQSVFAHNFVSSPHVDHYRSFPHVYAAKIDEFLKICSIARV</aaseq>

Gene Sequence

<dnaseqindica>43..614#1521..1623#1850..2058#3179..3437#aatcaccaccacctcgtctccactctccacgctcccgcatccatggcggcctcctccgcccgcctcctcgccgccgcagcgcgcggccgtgccgccaccaccttccgccatgctcctaccgtctcctcctccctctcattccctcccaacccgcaccaccgcccgtccctccgcggccgcgctggcatctccttctcctccacctccatctccctcccctcgggctccccgcacggcgcctccgcccccttcaacctcttccctcccgactccgatcccttcatacagtgggaccctccccctcccgacgccgcctcgccgctcggcgccggcgccgccggccgcgaggcgcccggggacctcacgctggtcgtgctcctcgggtggctcggcgcgcggcagaagcacctgcggaggtacgccgacctctaccgcgaccgcggggtcgggtcggtgcggttcgtggtgcccgtgcgggagctcctcgggctcgacctcggccgccgcgtcgagcgcagggtcgccgacctcgccgccgagatcgccgcctggtgcgacgccgaccaccggcgcacgctcctcttccacacgttcagcaacaccggatggctcgcgtacggaaataaaaccttcatttttcgttatttactcgcttctcccaataatgtgctattactgttcttccctgaacaccggatggttgaaattgaagtgtttcaaaccggacaagaagttgataggttggaattattacatgcgcatggtttgcacatgcgattgcacggcctcaattaaattgggcaatgtgttgcatctttgcggcaggatagaattgatacacgcacatgcatgtttatgctgtgacacattggttgttgcataggtttggttgataaaaacgtggttgatagaggtacgaaagaaatccaaatggtttggacagcatgttctgggaaagctcgtcatcttctgtctagagtatactgtggataatggagctactccatgatattccaatggtcaagataatgagaaatggagtgcgataagaacttagcaaaggtgatcggttgaagagcacaacagatatccatttgtgagtgcatagattgagtaaacagcgtggataacagcatgatctatgtggagttgttaggccaccttgattgtgctagattagtaccatggtaaaatatttttttcaggcatttttacctcataatgagaatcactagcaacggcgtccagtcactgacagtctcatataggtgaatcacattcatggttgatatggctgctgttgttaaggactacctaattgaaaaaacatggtgtgttttgtttttctaatagtttctagtggaaatttcttgtggtgcagtgaaagataattttccatttctgccttgcctagaagtcagaaatcccctagtggaggttttatttgataattcggtgatctgtggtcatgccattcacatggctatatatgagaacttcgctatcaaatttctttccagatatggtgctatacttgagaatctacaatcaagagctgatataattgagaggatacggggatgcattgtagattctgcaccagttctggagataagaccagaggtctggacactatctttttgctgcattacatatacctgaaataagcttttaactggtagcagtaaattcttgttcaaatacattttagtatgttggatttgttttttcatcttgaactgtcgtaagatcctattactatagctagaatggtttgtgctattatctggaagtttccctatgcaaacaaatctgtttaccaggaagctcatatataaacttaactcaggtctgggctgctggattctctgctgccatgttgaagaaaagcagttccatgacaggaccttcagttgaatctcctgatggatatacttcaaatggcaccttgaacaaccttagctctgatgtgacgagaccaacatggggtgaaaatattcttctatctactctacagaaattcttcgagattgtccttcatctacctgatgtaaacaagtaagtccttaccatgttcaatcagttctggttacgtgttttgaagcatggacagctcacaccgttgtactcagaagttaacttgggttttatagattggaattaaacaatgctgtatacttcaattactacttcattcacactgccatgcaaaactcattgttttaggcaccttttctatgaagattgtaggttgactgccctcaatgagtaggtgtcatatttagcaaatggaagagtagtgggggtataaaaaagagagacagggttgagaaaagattttggagatattgatttatctcttgcttgctcagttgccctaaagatttattgaatggtcatttggtcccttttatagggaagggcatatgcctagttgacttggcagctactgctccaacctggactcttttcctaaccaagttttataacctacaaattctatcatggactctcctgatgttgctgactaatcttgctgagtacgtaaattaacaaaactcctgatgaacatataatctaggacttgccctatgccatcttctgtctctaaaaggcttactgacgtcctctttgtgattggaaggtcgcaacattcataaaagaatttcgtagcatattcaatttaacagaagagcagcagtatgcatgggtgcctcttttcattatatttctccatgtggactgaactttaggttactgggctcgatgcataaatacattgttgttttctttcattgcacccgcaaaaaaaaagtattataccatgtctatgggcagttagacactgaatttcactttcagttgatttgcacagtagatcaaatggacctttcaacgtgtcatgtttgcaatgcattaattatgtaattttggcaaagcaaatcatgatggttcattgtacagctcataattactgtgagtgactacagtttatttagtcagacttaggtaacttctcctccagttttctccaaacatgacttatttacgttatttctgttccatagattcagcatgatcagttattcccaaatcataccatagagtgatagagattcacctgatggctctttctgttacctgacatttttttctctccgatcgtcatgatgttcaggaggctagaaaaggttcactcggttctttcagagaagcagcctacctgcccccagttttatctgtacagctcagcagatcgagtaatacctgctgaatgcgtcgagcgcttcatcgacatgcagaaatccctagggcagagcgtattcgcccacaattttgtgtcatcgccacatgtggaccactacaggagcttccctcatgtctacgcagcaaagatcgacgagttcctgaagatttgctccatagctagagtatgaccagtttttgaccaacaggtattctttcgagacataggtattgctctattaccttgagaggtatatgaatcatggaatatttacccattagagttcctgaaatgatgtgtactcgttcatgaaaaatatgaaatcttgaaaagtgacgctgaaagctgaactcttagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0133900, RefSeq:Os02g0133900