Os02g0152300

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Revision as of 02:11, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0152300| Description = UspA domain containing protein| Version = NM_001052451.1 GI:115444272 GeneID:4328325| Length = 4393 bp| Definition ...")
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Gene Name

Os02g0152300

Description

UspA domain containing protein

Version

NM_001052451.1 GI:115444272 GeneID:4328325

Length

4393 bp

Definition

Oryza sativa Japonica Group Os02g0152300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2869668..2874060

Sequence Coding Region

2869748..2870045,2870450..2870571,2870828..2870949,2871079..2871260,2871355..2871400
,2871533..2871611,2871700..2871777,2871886..2872470,2872917..2873657
,2873794..2873868

Expression

GEO Profiles:Os02g0152300

Genome Context

<gbrowseImage1> name=NC_008395:2869668..2874060 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2869668..2874060 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtaccccacgttccacgtccacccgccgttcccggtgtcggcgaggaagaaggaggatgacggcggcggcggcggcggcaagaaggaggcggcggccgccgcgatgaggcggctggcggagatggaccaccgcgcggcagccgacggcgggaaggtggtggcggccgtggccgtcgacggcgacaggggcagccagcacgcgctcaagtgggcggccgaccacgtcctctcgctctcccaccccttcttcctcctccacgtccgccgcaagcacgcctccctccactccgccgggggaaagcaattctccctattgcacgtgcaggatgatgttgcagcttcttctcctgatcaaatggatcatcacaccaaagatctgctgctcccattccagtgcttctgcagcagacgagggttacaatgcagggaaaccattcttgatggaactgatgtgtggaaagttattatagattttgtccttgaccataaagttgacaaattagtactgggggcatcatctaggaatgcatttacaaggacaatatggaagttggatgtgccaacatgtgtcacaaaatctgcaccaaatttctgttcagtgtatgttatatccaaagggaaactatcttcattcaggcttgccacccatgcaaatgcaaatgataccagcaaagaagagctggagaatatatctgaaaatcggccgctaattgcaaaaagtgaaccagcaccaataatacatattgaagggcaaaattcatctagtgcactttgtcctggctgcaaccctttatctccaaacctgagtgaagaatgtactgaatcaacttctaaatactacccagaagatttggaggctgaaataaggaagttaaagcttgagctgaaacagaaaaatgacgatatgcacatgtggaacaagttacctcttgggatcggagacaggagtgaaaactcaaatgcaagtgttgaacatgaggatgaacatttacaagaattcacgacatgttcaacccattcctacagtgagagaccaaatgcagaaccgagttccgcagttcgtggcccaaagcataagctcttgaaactcgaaacttcctcttctgatcaatgcagagagagaaccatacaggaatttaaagaccatagttcccaggatacggtgcatccgatcttaagacgtttgccgcccaaattttactcgcctagaaatgattctaagcatggatgtgcttctgaaaaggcttacaaccttgaactgaagtgtaaatctttgccaaggccaattgagacgaaaagactactggagggtcttccaactagattccaatgcaaaatatacacaacagaagaggttgcaaatgccaccgatcatttctcaccggaactgaaggtaggggaaggaggttatggaccagtctataaagctacacttgacaatactcttgttgctgccaagattctccattctaacataactcaaggactgaaacagtttcaacaggaggttgagttgttgaacaacattcgccacccgaatatggtgcatctgttgggtgcttgccctgagtatggctgtctggtgtatgaatacatgccgaatggcagcctcgaggaccgtctcttctgccggtcaggcaccccaccgctgccatggcagctccgtttcaagatggcagtggagatagccactggcttgctctatctacacaagatgaaacctgaagcctttgtccaccgtgatctcaagcctggaaacatcctccttgacaaagatttcgttagcaagatcagcgatgtcggcctcgctcgcatcattccccggtcgatggatgagacggtcacgcagtaccggatgacagatgctgcagggaccttctgctacatcgatcctgagtaccagaagactggattggtcaccacgaaatccgatgtttatgcgctcggcatcatctatcttcagatgatcactgcaaaagatgcaatggggcttgcttacatggtctctgatgcactggaggaaggaacatttgaggggctcttggatcctaatgtcaccggctggcctgtgcaggaagctcagaagtttgctgagctttcactgaaatgctgtgaactccggcacagagaccgtcctgacttggaatccgtcgtgctccctgagctgatccgtcttcacacattcgttgcatcatctggagataattcttccatcgaccaaggccaccagcgttcagtcagcgacaaggagttggctctggaaaatgacttggccgagattctgaacgatgggctagtgaagggggcgtcatttgcagcataa</cdnaseq>

Protein Sequence

<aaseq>MSYPTFHVHPPFPVSARKKEDDGGGGGGKKEAAAAAMRRLAEMD HRAAADGGKVVAAVAVDGDRGSQHALKWAADHVLSLSHPFFLLHVRRKHASLHSAGGK QFSLLHVQDDVAASSPDQMDHHTKDLLLPFQCFCSRRGLQCRETILDGTDVWKVIIDF VLDHKVDKLVLGASSRNAFTRTIWKLDVPTCVTKSAPNFCSVYVISKGKLSSFRLATH ANANDTSKEELENISENRPLIAKSEPAPIIHIEGQNSSSALCPGCNPLSPNLSEECTE STSKYYPEDLEAEIRKLKLELKQKNDDMHMWNKLPLGIGDRSENSNASVEHEDEHLQE FTTCSTHSYSERPNAEPSSAVRGPKHKLLKLETSSSDQCRERTIQEFKDHSSQDTVHP ILRRLPPKFYSPRNDSKHGCASEKAYNLELKCKSLPRPIETKRLLEGLPTRFQCKIYT TEEVANATDHFSPELKVGEGGYGPVYKATLDNTLVAAKILHSNITQGLKQFQQEVELL NNIRHPNMVHLLGACPEYGCLVYEYMPNGSLEDRLFCRSGTPPLPWQLRFKMAVEIAT GLLYLHKMKPEAFVHRDLKPGNILLDKDFVSKISDVGLARIIPRSMDETVTQYRMTDA AGTFCYIDPEYQKTGLVTTKSDVYALGIIYLQMITAKDAMGLAYMVSDALEEGTFEGL LDPNVTGWPVQEAQKFAELSLKCCELRHRDRPDLESVVLPELIRLHTFVASSGDNSSI DQGHQRSVSDKELALENDLAEILNDGLVKGASFAA</aaseq>

Gene Sequence

<dnaseqindica>81..378#783..904#1161..1282#1412..1593#1688..1733#1866..1944#2033..2110#2219..2803#3250..3990#4127..4201#agcatttccctccaaatccgctgcttccctccattttggcgccacaatctctctctctctcctcctcctcctcgccggagatgtcgtaccccacgttccacgtccacccgccgttcccggtgtcggcgaggaagaaggaggatgacggcggcggcggcggcggcaagaaggaggcggcggccgccgcgatgaggcggctggcggagatggaccaccgcgcggcagccgacggcgggaaggtggtggcggccgtggccgtcgacggcgacaggggcagccagcacgcgctcaagtgggcggccgaccacgtcctctcgctctcccaccccttcttcctcctccacgtccgccgcaagcacgcctccctccactccgccggtacgatcctcctcccccctcagctcacccatctcaaccctagaaattgatcttgacgtgatcttgatctcctttgggatcccggcacggaaaacggagagatggattagcgcacgattaatgaagtattgggttattggctaataaacttgaaaaaatgattgacatgattgatatgatagataatttttgcaaaaatacgtatcgttcagtattcggaaatcgtgcgcgtagaaaactagtgagtagaggttggaaaaggggagaaaagaacccaccttaatctgtctcatttgatgtgcatccaagttgcggtgctgttcatgtgatgtgcattgatgaattgtgaattttgcattgtattgttagagtttataaattttccaagtttttcatttatgcagggggaaagcaattctccctattgcacgtgcaggatgatgttgcagcttcttctcctgatcaaatggatcatcacaccaaagatctgctgctcccattccagtgcttctgcagcagacgaggggtatgcatccatttttcctacctctaccttgtcacgcagagattatgttcattttggcggaatctaaaatctatggagatatagagagtttctgaaaactacagactggaatgctcatgttggcatggacctgaaatcgatcattcatgtggcttttcatataatctattaagattttgctttcctttgtttgacctgatgatagcatgagcaaaatcatgacccttttttggctgacttgctttaatatctacagttacaatgcagggaaaccattcttgatggaactgatgtgtggaaagttattatagattttgtccttgaccataaagttgacaaattagtactgggggcatcatctaggaatgcatttacaaggtgccgtattattttacaaccattaagtcaaagaaaattgcaaccatttctatttacagtttattttctgaattgttttaatacttctcttttgattgctatattgatctcagttcttaactagtgcaggacaatatggaagttggatgtgccaacatgtgtcacaaaatctgcaccaaatttctgttcagtgtatgttatatccaaagggaaactatcttcattcaggcttgccacccatgcaaatgcaaatgataccagcaaagaagagctggagaatatatctgaaaatcggccgctaattgcaaaaagtttgtgttactctaatgctaattccctttagatgatattcactctagtatacttgtgagttgtatgttcattaggtgcatgtggaatttgcaggtgaaccagcaccaataatacatattgaagggcaaaattcatctaggtgagctttgcatcctctctctatatatatgctaacataaattccttgatgttttcatggatacatcaaatatgtgcccttctcatacaaactacccaggttttgataaatgagtttttttttttatgatagtgcactttgtcctggctgcaaccctttatctccaaacctgagtgaagaatgtactgaatcaacttctaaatactacccagtatgcttttgatattttcccctactctttgttattttggttttgtcacttgcagaaatataactattagaccaactgctttttgcaggaagatttggaggctgaaataaggaagttaaagcttgagctgaaacagaaaaatgacgatatgcacatgtggaacaaggtaattgtgataccttgtgctgtgttgcttattgtttatctcataaagttacttgtctctaatcccatattctgaaagtatgaattctaatggaaatttggactgcagttacctcttgggatcggagacaggagtgaaaactcaaatgcaagtgttgaacatgaggatgaacatttacaagaattcacgacatgttcaacccattcctacagtgagagaccaaatgcagaaccgagttccgcagttcgtggcccaaagcataagctcttgaaactcgaaacttcctcttctgatcaatgcagagagagaaccatacaggaatttaaagaccatagttcccaggatacggtgcatccgatcttaagacgtttgccgcccaaattttactcgcctagaaatgattctaagcatggatgtgcttctgaaaaggcttacaaccttgaactgaagtgtaaatctttgccaaggccaattgagacgaaaagactactggagggtcttccaactagattccaatgcaaaatatacacaacagaagaggttgcaaatgccaccgatcatttctcaccggaactgaaggtaggggaaggaggttatggaccagtctataaagctacacttgacaatactcttgttgctgccaagattctccattctaacataactcaaggactgaaacagtttcaacaggaggtatgtccatggccaattttgtttgacacaagtatcccaccaccacaatctctttaatttccaatcaaatgagagtgatgttgggaacttgggatagatactgacagtaaaatgttttcagagcagcacaatcatattatcatttgattttggtaatattgtcactatagatagccagatacttctgttaagtcaaaatcatgtagacaatgatgtgtttacgtgaaaatttcaaatttcattcacaaaaatgaaaaactcaacattcagtaatatgaaatcatagagactattgtggtgcatccaaaaatgaaaagggaagggaatcatatgatttacttttagtcctttgctaaaaagaaaaacatcatgcatcagtttcagctatatataaatgatatatctgtaaaccatgatggtaagaatttaaattgtgttatcaacaggttgagttgttgaacaacattcgccacccgaatatggtgcatctgttgggtgcttgccctgagtatggctgtctggtgtatgaatacatgccgaatggcagcctcgaggaccgtctcttctgccggtcaggcaccccaccgctgccatggcagctccgtttcaagatggcagtggagatagccactggcttgctctatctacacaagatgaaacctgaagcctttgtccaccgtgatctcaagcctggaaacatcctccttgacaaagatttcgttagcaagatcagcgatgtcggcctcgctcgcatcattccccggtcgatggatgagacggtcacgcagtaccggatgacagatgctgcagggaccttctgctacatcgatcctgagtaccagaagactggattggtcaccacgaaatccgatgtttatgcgctcggcatcatctatcttcagatgatcactgcaaaagatgcaatggggcttgcttacatggtctctgatgcactggaggaaggaacatttgaggggctcttggatcctaatgtcaccggctggcctgtgcaggaagctcagaagtttgctgagctttcactgaaatgctgtgaactccggcacagagaccgtcctgacttggaatccgtcgtgctccctgagctgatccgtcttcacacattcgttgcatcatctggagataattcttccatcgaccaaggccaccagcgttcagtcagcgacaaggtaaaacaaaaaaaaggaaccatcttttctctgcaaattctcaaatgaaggcatcaggatatctccaatatgtgttctgaacttctgaagttatgggtgtttcatctagactaatattgttctactctaaatgcaggagttggctctggaaaatgacttggccgagattctgaacgatgggctagtgaagggggcgtcatttgcagcataaaagtgcaaggggccagtagatgttattctgtcaaagatactggaatctgcagtagttttgattttgctgtaaatactaccctagcccagaaatttttgaataattagatcatttgggaaacgtgtactaacaacaacctgtaaattgaacacaatctatagctctcatctggtagcactgttcacttctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0152300, RefSeq:Os02g0152300