Os02g0162500

From RiceWiki
Revision as of 02:13, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0162500| Description = Similar to 40S ribosomal protein S14| Version = NM_001052517.1 GI:115444404 GeneID:4328392| Length = 1791 bp| Defin...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0162500

Description

Similar to 40S ribosomal protein S14

Version

NM_001052517.1 GI:115444404 GeneID:4328392

Length

1791 bp

Definition

Oryza sativa Japonica Group Os02g0162500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3358926..3360716

Sequence Coding Region

3359156..3359223,3359371..3359500,3359595..3359680,3359766..3359811,3359897..3360016
,3360622..3360624

Expression

GEO Profiles:Os02g0162500

Genome Context

<gbrowseImage1> name=NC_008395:3358926..3360716 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3358926..3360716 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaagaggaagaccagggagcccaaggaggagaacgtcactcttggacccactgtccgtgaaggagagtatgtgttcggagttgcccacatcttcgcatccttcaatgacactttcattcatgtcactgacttgtctggaagggaaactcttgttcgcattactggtggcatgaaggtcaaagctgaccgtgatgagtcatcaccatatgcagctatgcttgcttctcaagatgttgcacagcgttgcaaggagcttggtattactgctctgcacatcaagcttcgtgccactggaggcaacaagacaaagacacctggtcctggtgctcaatctgctcttagggctcttgctcgctctggcatgaagattggtcgcattgaggatgtgaccccggttcccacggacagcacccgcagaaagggaggtaggagaggaaggaggctgtag</cdnaseq>

Protein Sequence

<aaseq>MSKRKTREPKEENVTLGPTVREGEYVFGVAHIFASFNDTFIHVT DLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGN KTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDSTRRKGGRRGRRL</aaseq>

Gene Sequence

<dnaseqindica>1494..1561#1217..1346#1037..1122#906..951#701..820#93..95#cttctctcgtgtctccggcggcggcgagctcgtgatctcaacgaccaggaggaaaccggcgctcgcctcgatctccgccgcctcgtcccaccatggtaaggccaaagtccccccctgttccccatctcgggtcaaattcctgcccggatttgcagctttgatgctaggtttgtgtagcacgcacggtctgcgagttggctttgtagagctgtaacttagtactagagcatctggcatgttagggagattattattacagggtttgtatcaattctgggatgtgatggccaaatggttgtttagttgttgcaagggtgtttcactgatttgctgttctaattttgggtcgtgtatgaccctagcacatgattggtgtggcgtttgattcgcagttttgtgttgaacaaggtctggtttgtgttgatgatgtttagaaatgtaattgttgcaagggtgtttcactgtttttgatagatactccaagtatgttttgtagtgaacatttggatgatgtaggaaggtctctgtgtttacttgatgagaggcatgaaaatttcttagtgtactgtgcacacctacttgtatggcaggttatggcataaattagttttgtcacaacttggcatgtagaaatgtaattgttatgtagctgtagctggttccttctcattccatagcttaactgttactcgtcctccagtcgaagaggaagaccagggagcccaaggaggagaacgtcactcttggacccactgtccgtgaaggagagtatgtgttcggagttgcccacatcttcgcatccttcaatgacactttcattgtaagtacttctttttccagttatatatatccttcaatctagtctaaccacctattcagtttcttaccaatgttttcctctgcagcatgtcactgacttgtctggaagggaaactcttgttcgcattactggtatgatttgtgtttatttatttcatttggttctctagctgcaattactgatgaggtaaattgaccattccctgaattcttgcaggtggcatgaaggtcaaagctgaccgtgatgagtcatcaccatatgcagctatgcttgcttctcaagatgttgcacagcgttgcaaggtttgtatggaaacattatctctcaattggacagatggacagttcttgagtgactttttaaaagtatttttaaaattctgttgaacatttccaggagcttggtattactgctctgcacatcaagcttcgtgccactggaggcaacaagacaaagacacctggtcctggtgctcaatctgctcttagggctcttgctcgctctggcatgaagattggtcgcattggtaaattcagagtttcactcatacaacctaaggatatagagatagttatttgtttcatctatgctgtggatagtgtttgtagcaggctcattatgcttcaatcctccttagacattgtgatgattgtatgtctgatcctttttgcagaggatgtgaccccggttcccacggacagcacccgcagaaagggaggtaggagaggaaggaggctgtagatgtattgtcagccaacttgtcgccatggagcatctcttctttggatagtctcatagctcccaatgttcctgaagagagatttagttttgctcagtgtcctgaattgttgactgtcaagttaattcggctgctatgttttggttcaaggaaatttccagttttcatgcttaacaaacccaatatgtgtaccttcgtggttccttataatatggttggattgtcttatgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0162500, RefSeq:Os02g0162500