Os02g0173500

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0173500| Description = Similar to Cholinephosphate cytidylyltransferase| Version = NM_001052575.1 GI:115444520 GeneID:4328455| Length = 397...")
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Gene Name

Os02g0173500

Description

Similar to Cholinephosphate cytidylyltransferase

Version

NM_001052575.1 GI:115444520 GeneID:4328455

Length

3979 bp

Definition

Oryza sativa Japonica Group Os02g0173500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4024688..4028666

Sequence Coding Region

4024793..4025025,4026259..4026372,4026482..4026577,4026780..4026822,4026958..4027111
,4027233..4027315,4028032..4028130,4028225..4028350

Expression

GEO Profiles:Os02g0173500

Genome Context

<gbrowseImage1> name=NC_008395:4024688..4028666 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4024688..4028666 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgaccacgctgcggcggaggcggcgccgcagtcgtcgcaggaggaggaggaggactggaaggaggccgaggggggagacggggacgtcgaggtggcggacaggggcggcggaggcggcgccgccaatgggggaatcccggaggggaggccgatccgggtctacgcggacggaatctacgatctcttccacttcggccacgccaagtcgctcgagcaggccaagaggctgtttcctaacacatatctccttgtcggatgctgcaatgatgagttgacacataagtacaaagggagaactgttatgacagaggatgagcgatatgaatcacttcgtcactgcaagtgggtggatgaagtcattcctgatgctccatgggtggtaacggaagaattcttgaataaacataacattgattttgttgcacatgattctctgccgtatgctgatgctagtggagctggtaacgatgtctatgaatttgtcaaaaaacttggtaaatttaaggaaacccagcgcacagatgggatatcgacgtcagatattataatgcggattgttaaggattataatgagtatgttatgcggaacctggccagggggtacaccagaaaggatcttggtgtcagttacgttaaggaaaaaagactgagagttaacatgggattaaaaaacctgcgtgacaaagtgaagcagcaccaagaaaaagtaggggagaagtggaatacaatggcgaaactccaggaagagtgggtggaaaatgcagatcgatgggttgctggttttctggagaagtttgaagaaggctgccactcaatgggaactgccatcaaagagcggatccaagagaggctcaaggcgcaatccagggatttcagccttctacagtatgatggcgaggatgttgacgaggatgaggacgacgacgaatatgtcagagaataa</cdnaseq>

Protein Sequence

<aaseq>MADHAAAEAAPQSSQEEEEDWKEAEGGDGDVEVADRGGGGGAAN GGIPEGRPIRVYADGIYDLFHFGHAKSLEQAKRLFPNTYLLVGCCNDELTHKYKGRTV MTEDERYESLRHCKWVDEVIPDAPWVVTEEFLNKHNIDFVAHDSLPYADASGAGNDVY EFVKKLGKFKETQRTDGISTSDIIMRIVKDYNEYVMRNLARGYTRKDLGVSYVKEKRL RVNMGLKNLRDKVKQHQEKVGEKWNTMAKLQEEWVENADRWVAGFLEKFEEGCHSMGT AIKERIQERLKAQSRDFSLLQYDGEDVDEDEDDDEYVRE</aaseq>

Gene Sequence

<dnaseqindica>106..338#1572..1685#1795..1890#2093..2135#2271..2424#2546..2628#3345..3443#3538..3663#atgtgaaatctcgccgtctcctctcggagcctttcctcctcgccttctcccttctctctctctctctctctctctctctctctctctctcccgaaccttctcgccatggccgaccacgctgcggcggaggcggcgccgcagtcgtcgcaggaggaggaggaggactggaaggaggccgaggggggagacggggacgtcgaggtggcggacaggggcggcggaggcggcgccgccaatgggggaatcccggaggggaggccgatccgggtctacgcggacggaatctacgatctcttccacttcggccacgccaagtcgctcgagcaggccaagaggctgtgagaaaccccctccccctccccttctctctcgtcgtagtctcgctcactcgattcgatctgcttctcgccgtcatgatgatgtcatcatgatttgaagtattttgtatggagtaatcagaggcagtttttgtttttggtctggttcggcgtgagatttgagcgagaaatgttagcttttttagttagggtggggaatctgacgccattattagcagttcaaccacgtcctgcagcgatttgctatcgtttgttgcgatacttcatcttaatagatcgtttcgttgattcttagtagatcgtttcgttgattttggtgtaaaaagtgtttttactgtcgcgctgccgattaggaagtagtctgatgatgaatcttgctgtagataatcctttctgagaaaaatggatggatgttaattgctggtgttttcgtgcttttgtcatgtgagggacatgcttgagcaatctcggtatgttttacctaacgtgatatcactctcggatgtcctttcttgtttgccctatgttggatcattcagagggaaagataaactgttcacagattccttttcaaataatgcggtttggtttggcattatttgccactctctgtttaatctgtacggtaatcttgccttgtttccttttatttgtggactaaccgggtttattggttggatgcggtcaaatcagtctgctctaaggaaatgtgcttatctgttccaaactagtctgtgattttttgcccattacgaagttcctcacacatatatcattcacagaagaccttttgtgttgtgggatagttacttgtttacacgaaaatgcttttgggtactaatggggaaagtgcagtgcatgacttttctgtggcatcttttaacttttacaaggaaccttgcatttgcagtcatgctctgtttcttaagaatgaagccgtgtttctatctttaaaggctatcctgcatgatcttgtgaaagattattttttttatccaattgtacacctcataaaaaaaactccaattgtatactctcctacttggagacacgtctttttccctatatgttccatagattttgtgcatacttagagccacctttttcatgtatgttctgaatagttgcagccttgttaaaatttgtattcaactactatatagaaatttatttactggatctattgcaatacaacaaagatgttgtttaaccgaactgccttcaataatttaggtttcctaacacatatctccttgtcggatgctgcaatgatgagttgacacataagtacaaagggagaactgttatgacagaggatgagcgatatgaatcacttcgtcactgcaagtaatcttgtcttatgctttgttctagtcaataagccaccaatattatatctttctttagttcttttagttactatactatgataatacatatgctcttcttttcctaggtgggtggatgaagtcattcctgatgctccatgggtggtaacggaagaattcttgaataaacataacattgattttgttgcacatgattctctgccgtaagtgttcttaacagatctcgatgtttataacatagtaatcatttctgatgtacttgttgtgataatacatatgctggtcttttctttctttacataatatatacagagcctttgggccttcacagtgatggatctgaaattcaaatatcattatctttaattaatatattcaccttatttttcctatttgaatatacaggtatgctgatgctagtggagctggtaacgatgtctatgaatttgtgagccctaatttcacgactgttttcttcaattacaattattgattaaaattttgtttgtcgtatctagtaacagttattatttgtgtagactggcatatttctgacagagactaatctcgttgtgtctatcaggtcaaaaaacttggtaaatttaaggaaacccagcgcacagatgggatatcgacgtcagatattataatgcggattgttaaggattataatgagtatgttatgcggaacctggccagggggtacaccagaaaggatcttggtgtcagttacgttaaggcatgtgatattaacctgacactttcacctcaattccagcttgaataggttgtctttatattttaacagtgctgcggtaatgttttgaactggccacctgatctttgatacatcttatcaggaaaaaagactgagagttaacatgggattaaaaaacctgcgtgacaaagtgaagcagcaccaagaaaaagtaggggagaaggtattattcactatcttcctaatttatgtcaaagtagggtttaacaattgattaactgacagttttgccatcttcgtatctctctgtgttgatcactggttggttaatgcagggatactttccttgtgtcattttactttgataaacataattctgaatgtgacatgtatggcatgtaaagtataatcttttctggatagtgttttgttggttcaattggtagacttttattggaagctaaaaatacgttctcaagcttaccatgatgatgatgctacatgtccatatcttcagtttgatgtactttctcttttctagttcaaaattaatcttttggtggtcaagacttttctcttttctagttcaactaatcttttggtagtcaagacctagagtccaaatctgatatctgtatcttgtacactctcctacttcaaacaaagatactaatttctcctactaaagttgctaattaatatttgggtcccccctaatcttttctagttcaactagtgttttgttggtcaagacctagagtccaaatctgatatctgtatctagtacactctcgtacttcaaacaaagattctaatttctcctactaaagttgctaattaatatttgggcccccctaataatattttggtcctacaaacctagcattccctctgaaattaacctgtccaaatgttttgaaataaattggttattcgcagtggaatacaatggcgaaactccaggaagagtgggtggaaaatgcagatcgatgggttgctggttttctggagaagtttgaagaaggctgccactcaatggttaatcactccctgccacttagtagactagaacttagcatatgattcaaggaattcattgctcacttcaacttgctttaaaaaaattcctcagggaactgccatcaaagagcggatccaagagaggctcaaggcgcaatccagggatttcagccttctacagtatgatggcgaggatgttgacgaggatgaggacgacgacgaatatgtcagagaataatgccaccactgtgaatatacgtcaagtataatatatgtacatgcgctgcatgtagcagatcttcaatccttgggcatgtcatgcacccctctctcttcaggaatggtgaacttgtgccccccaggttagattttggtgctgtgttgtagcaatagcaggtgttttgtttaggctaagacgcaaagtaagcctgtaaaatcccctagtcgatggcctgaatggttatctggaagatacagatatgttcaattatatttttgtttagcacacaagaacactatatttcaattgactatctactatatttcaattgact</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0173500, RefSeq:Os02g0173500