Os02g0174000

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0174000| Description = Homeodomain-like containing protein| Version = NM_001052580.2 GI:297598673 GeneID:4328460| Length = 2024 bp| Defini...")
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Gene Name

Os02g0174000

Description

Homeodomain-like containing protein

Version

NM_001052580.2 GI:297598673 GeneID:4328460

Length

2024 bp

Definition

Oryza sativa Japonica Group Os02g0174000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4058205..4060228

Sequence Coding Region

4058205..4058879,4059278..4059344,4059523..4059592,4059720..4059777,4059929..4060005
,4060108..4060228

Expression

GEO Profiles:Os02g0174000

Genome Context

<gbrowseImage1> name=NC_008395:4058205..4060228 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4058205..4060228 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgcgtgcagggcgactccggcctggtcctcaccaccgaccccaagccgcggctccggtggacggtggagctccacgagcgcttcgtcgacgccgtcacccagctcggcggccccgacaaggcgacgcccaagacgatcatgagggtgatgggagtgaagggcctcaccctctaccacctcaagagccatctccagaaattcaggttagggaagcaaccgcacaaggagttcagcgagcactcagttaaggaagccgcggcaatggagatgcaaagaaacgcagcatcttcttcaggcataatgggcagaagcatgaaccatgaccgcaacgtgaacgatgccatcagaatgcagatggaggtgcaaagaaggctacatgagcaactagaggtgcagaagcatctgcagatgaggatcgaagcgcaggggaagtacatgcagtccatcctggagaaagcctatcagacgctcgccgccggcgatgtcgcggcggcggtggcgtgcggcccggcggggtacaaatccctaggcaaccaccaggcggcggtgctcgacgtgtgctccatgggcttcccttccctgcaagacctccacatgtacggcggcgccggcggcggccacctcgacctgcagcagcagcagccgccggcgtcgacgatggagagcttcttcgcctgcggcgacggcggcggctcgctggggaagacggcggcgaagacgaggcattacggcggcgccgggaagagcccgatgatgtggggcgtcgacgacgacgacgacgacgacgacccggccgggaagtgcggcggcggcggccatcatcagctgcagatggcgccgccgccgatgatggacggcggcatcgacgtcatggactccctcgccgccgacgtctacgagacgaagccgatcatgtccggcgactcgacggggagcaagggcggcggctacgacgtcgcggcggcggcgtcgaagctggagaggccgtcgccgcggcggccgccgcagctggggagcccgtcggtgatggccggagctcagacgaggaacctatcctacgggtaa</cdnaseq>

Protein Sequence

<aaseq>MCVQGDSGLVLTTDPKPRLRWTVELHERFVDAVTQLGGPDKATP KTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFSEHSVKEAAAMEMQRNAASSSGIM GRSMNHDRNVNDAIRMQMEVQRRLHEQLEVQKHLQMRIEAQGKYMQSILEKAYQTLAA GDVAAAVACGPAGYKSLGNHQAAVLDVCSMGFPSLQDLHMYGGAGGGHLDLQQQQPPA STMESFFACGDGGGSLGKTAAKTRHYGGAGKSPMMWGVDDDDDDDDPAGKCGGGGHHQ LQMAPPPMMDGGIDVMDSLAADVYETKPIMSGDSTGSKGGGYDVAAAASKLERPSPRR PPQLGSPSVMAGAQTRNLSYG</aaseq>

Gene Sequence

<dnaseqindica>1350..2024#885..951#637..706#452..509#224..300#1..121#atgtgcgtgcagggcgactccggcctggtcctcaccaccgaccccaagccgcggctccggtggacggtggagctccacgagcgcttcgtcgacgccgtcacccagctcggcggccccgacagtacgcatcatcaatctctcaatcaattctctccaaaaaaatcgaaacaagaattaatctcttctttcttacgatgaattgatgatcgtcttgtcgtcgcagaggcgacgcccaagacgatcatgagggtgatgggagtgaagggcctcaccctctaccacctcaagagccatctccaggtaacctagctagctaaccacaccttagctagctagggttttctcctagcttagcttgttcctcgatctctttctatctatatgattctatattcttatgttggatgattaactaaatctgtttttggtttcctgaatatatcatgaacagaaattcaggttagggaagcaaccgcacaaggagttcagcgagcactcagttaaggaaggtaatcaagatcttctagcatgcagtgtgattgatttcagttttgaatttgaagttataacttaatttccaccaccagtgcaactgatagtctgaggcgactgatttgttcttgaaattttccacagccgcggcaatggagatgcaaagaaacgcagcatcttcttcaggcataatgggcagaagcatgaaccatgagtaagttcttttcacagatcacctacactagtacactagtaacagtacactagtactgtagaattaatccggtttaagattttaatttctttcttagtccttgttcagttactctttttttttgttctttcctaactccatttttgtgtttgcttgtgtgtgaaattctctctctcagccgcaacgtgaacgatgccatcagaatgcagatggaggtgcaaagaaggctacatgagcaactagaggtaattaacaaaataaaagcgttgcatccacatgcatatgcattcaaattaaattgcaccaacaaattcacatgaagtttcatcaagtttctcctttcaaataaagcaccagggaagtttacctatccacttttctgcccttcattcccatgctgccatgcatacatacagccagcttagcttctcatcatgcatacatcaacaacttaaattacatacctcaacattctcatgaacctttacttatactacttaattattaccataactacaagattagttaattaggctaataattatgccctaattagcaaagctcatcatcatgcatatatatggacaatttgaattgtccaacaaattaaaattgggcatgaattctaattggtgacatgcaggtgcagaagcatctgcagatgaggatcgaagcgcaggggaagtacatgcagtccatcctggagaaagcctatcagacgctcgccgccggcgatgtcgcggcggcggtggcgtgcggcccggcggggtacaaatccctaggcaaccaccaggcggcggtgctcgacgtgtgctccatgggcttcccttccctgcaagacctccacatgtacggcggcgccggcggcggccacctcgacctgcagcagcagcagccgccggcgtcgacgatggagagcttcttcgcctgcggcgacggcggcggctcgctggggaagacggcggcgaagacgaggcattacggcggcgccgggaagagcccgatgatgtggggcgtcgacgacgacgacgacgacgacgacccggccgggaagtgcggcggcggcggccatcatcagctgcagatggcgccgccgccgatgatggacggcggcatcgacgtcatggactccctcgccgccgacgtctacgagacgaagccgatcatgtccggcgactcgacggggagcaagggcggcggctacgacgtcgcggcggcggcgtcgaagctggagaggccgtcgccgcggcggccgccgcagctggggagcccgtcggtgatggccggagctcagacgaggaacctatcctacgggtaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0174000, RefSeq:Os02g0174000