Os02g0174100

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Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0174100| Description = SBP domain containing protein| Version = NM_001052581.1 GI:115444532 GeneID:4328461| Length = 3942 bp| Definition =...")
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Gene Name

Os02g0174100

Description

SBP domain containing protein

Version

NM_001052581.1 GI:115444532 GeneID:4328461

Length

3942 bp

Definition

Oryza sativa Japonica Group Os02g0174100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4073887..4077828

Sequence Coding Region

4074001..4074341,4075118..4075257,4075647..4075838,4077073..4077155

Expression

GEO Profiles:Os02g0174100

Genome Context

<gbrowseImage1> name=NC_008395:4073887..4077828 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4073887..4077828 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattggatgcctcctccgaagcccacctcgccgcgctcccctcccctcctctgggactgggccgacgccgccgtgccgggctcctcctccggcgaggtatccgccgccgccgccgccgccgcggctcatccgggaaggcggcggaaggagaagcgaggcagggcggaggaaggaggaggtggtggtggggaggtgaggtgccaggtggaagggtgcggggtggagctcgtcggcgtcaaggactaccaccggaagcaccgcgtgtgcgaggcccactccaagttcccccgcgtcgtcgtcgccggccaggagcgccgcttctgccagcagtgcagccggttccatgcgctctcggagtttgatcagaagaagaggagctgcaggagacgcctgtatgaccacaacgctcgtcggcggaagccccagaccgacgtgttctcctatgcatcggcaaggccgccgtcgtcattattatttgatgataaccgacaaataagttttgtctggaacaaagctccactcagccatgtaaggcctttcgcaatttctccatgggaaagctcatctgaagttgggacaactgatggacatatttatttggataaatctcacatatccaaatctctcccagcatttaacaccgacatagatgagctcttaccaatgaaagacttctctgcagccactatttggatgttcttcggtgtcctttttatccgaactgcgcaggagagctgcatgtcatttcattaa</cdnaseq>

Protein Sequence

<aaseq>MDWMPPPKPTSPRSPPLLWDWADAAVPGSSSGEVSAAAAAAAAH PGRRRKEKRGRAEEGGGGGGEVRCQVEGCGVELVGVKDYHRKHRVCEAHSKFPRVVVA GQERRFCQQCSRFHALSEFDQKKRSCRRRLYDHNARRRKPQTDVFSYASARPPSSLLF DDNRQISFVWNKAPLSHVRPFAISPWESSSEVGTTDGHIYLDKSHISKSLPAFNTDID ELLPMKDFSAATIWMFFGVLFIRTAQESCMSFH</aaseq>

Gene Sequence

<dnaseqindica>115..455#1232..1371#1761..1952#3187..3269#aatgacttcttcttcctcctcctctccacagtccacactgttcatctcctcctcccctccctcccaattcgattcccaaatcccaaaattgaccacccaaatccgcgccaatccatggattggatgcctcctccgaagcccacctcgccgcgctcccctcccctcctctgggactgggccgacgccgccgtgccgggctcctcctccggcgaggtatccgccgccgccgccgccgccgcggctcatccgggaaggcggcggaaggagaagcgaggcagggcggaggaaggaggaggtggtggtggggaggtgaggtgccaggtggaagggtgcggggtggagctcgtcggcgtcaaggactaccaccggaagcaccgcgtgtgcgaggcccactccaagttcccccgcgtcgtcgtcgccggccaggagcgccgcttctgccagcagtgcagccggtgagctcgccggagtcgcgcctcctcttcctcttcctctctctctatattgcaaaaaaaaaaaaatcaatggaagcacacagctccaagctcgtgcgtgccttccttctcctcgattactttctgcaaaaagattcccttctcttctttggttcttcgaattacaattacaatttacagtttaatcacacgattggttgctgattaatttgcgcgaagctcgtgcttttttacgtgggtggtgaatttttctggtgtccgtacggattttccatttccgtatatgggaggcagagatgctatctttccactattggtactgtgtgtgtgtgcgagtggtggatcctgctgcatggctgagtgactctgcaatgggttttttttttccagttttagtatggtacttgtcctgtgccttcatttttgggattgggccttgctgtgcagtgagcctgtgattactgtgtttcaatctttaaaattattactgtgtgtatagtattttttttaaagataatggaaatgatttacacctccggtctctctgccaacaagcatacggccaaggagtcgagaaaagataaataaaaatactcgaggttatgggacaaacccctatctacgccctgattatatccagctgattactgtgtgtagagtagaatcatcttctgtgtatatgtacttttttttttgtatgtgggattttttgtgtatcctgcgagtagtttatgcaacagtgtgctaatttggttttggtgaatgtttgggatcaggttccatgcgctctcggagtttgatcagaagaagaggagctgcaggagacgcctgtatgaccacaacgctcgtcggcggaagccccagaccgacgtgttctcctatgcatcggcaaggccgccgtcgtcattattatttggtaatttgtctgtaccttaaatggatttgcaacagcagttacttttcactatttagcttgatgtatatgatgtatgtgaaaaatggtaaattgttggtgataagatctttataaggttactcctcggcaacctccacctaccttatccttaagcacttgcatgttcttacttgatcgatgggactgagcttacatgtgaaaattattttcagttcgaaaattcttggttgtaagttcgactccctgattaaatttattttgatagtatcaggattactcgcaaagaaactctacaatatcagatgttctatcaagttttctataattataccctattttccctttcaattaagattttccttcacaccaaaattgaaatgccactgcagatgataaccgacaaataagttttgtctggaacaaagctccactcagccatgtaaggcctttcgcaatttctccatgggaaagctcatctgaagttgggacaactgatggacatatttatttggataaatctcacatatccaaatctctcccagcatttaacaccgacatagatgagctcttaccaatgaaaggtatgattttccaaagatgtaagttttcgtgaaaaatgtcatcaattaagactactttcatggttcagcacattgcatagatctttgaaaaaattcaacctatacactgtaccaaatgccaaattcagatgctgttttgtcattgttgttgtttgttaaaaaaagtatcctggagttgtgcacacccatgaaaaaaaattagacccttgagcacatttgggtttagaaaataagatggtgtgcagtgtgctgctaagcttatgtcactatagttgacgaagtgtttcaaacataaaagacaacagagtttttagtaagattctaattggaaaagaaaaaaaataccgtgttttgtgtgatagtaaacatcctacagtttcaactatataagtagttctcttgtggtcattgggcagagaattacttctccagttagcaatacaagttgttttgatttaacttgcaggtatacaacaaagaatgatgttgggcattcttttggtcctttgctctcttttgcccaaattagttatgttagatgcttttaactacagttaatatgtgcttggaagtggagcatgcaccaaaaaatggatagcaaatgccacaagtttccatatgaggctttggcgctaatatcgcatcaatgatgtgttagtttttgtgtttggtacaagtatctgtacaaggttttggtgccaacattgcatcattaatgcgcagctagttgtttcatttggtgtgagattgtatataacggcagcaattattttcatgtaatagtattccaacagggatttaacaggggcagtattgtaccaaaaaccataacttaatgctatgtgcttattagtctacaacgacttcgaagtgctgactagagggggtaattatatttatgctatgttttgttagataatggaatgctatggattttgataacaagaaaaaaaaatgcaaagtgattccagatagctgtgattcttatctctgacaaaacgagggaattccaatacttagcacaatatgcgaaagtcagctcaggaatgccctaaatttaccttattatgcctgttccctaaactctccgcatgcgggagaactagttaccatgctaaaattctacatactaccaagcatactgcaatttcttggataaccttgctaattttatgctaaattctcaaaatatatttcaaatgaatatgagccattcaatccatttccattgcagacttctctgcagccactatttggatgttcttcggtgtcctttttatccgaactgcgcaggagagctgcatgtcatttcattaaggagaaaacaatgtacatattttgatggaagaatgaccattattccattttgcaggtccggacgcatctttaactgcttcaaaatttgatggagcaccggatcttcagcgtgctctctctcttctgtcatctagttcttgtggattacctgatcctgtacagcaagcatctcgcgtcatccaattcacaggcgccagccaaaacaaccgggaacttcctccacttaatggagggaattctgcttcagcatcatgtgccaatgtacaaactatagcacaaccggctcagctggttcgttttaccatgaatgctagcagcaatgcttgtcagtccaatttcttcggtttaaaccagataaactaaaggcctggactgaaagcccgtcgtcgatttcgaccaatatccaccaaggtggccttgagaagatacaagaattgcttctatcaactatcagagtgcaaacaatgtcacagttaatgttgtcatcataaatatcggtattggtctcccctgaactaaaatcgaacggagtgatggcttgcttgtgttttcgataatcgttatgcagttctaattttttttctattgttttctgccaatgtaccgattttcaaactgtgggtcttgtcatttatacttgtacaacctaatgtcaaaatgtcatgtatctttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0174100, RefSeq:Os02g0174100