Os02g0175500

From RiceWiki
Revision as of 02:14, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0175500| Description = Protein of unknown function DUF266, plant family protein| Version = NM_001052590.1 GI:115444550 GeneID:4328471| Leng...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0175500

Description

Protein of unknown function DUF266, plant family protein

Version

NM_001052590.1 GI:115444550 GeneID:4328471

Length

4676 bp

Definition

Oryza sativa Japonica Group Os02g0175500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4129139..4133814

Sequence Coding Region

4129852..4130235,4130355..4130453,4131046..4131146,4131229..4131300,4131712..4131802
,4132005..4132085,4132634..4132690,4132776..4132898,4133000..4133038
,4133255..4133380

Expression

GEO Profiles:Os02g0175500

Genome Context

<gbrowseImage1> name=NC_008395:4129139..4133814 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4129139..4133814 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcatcgcaggtgtggcaacggggcagcaaggacatgacagccatgccccctccgcgccaacgaggcgccgccaagaagcccatgtggataatcgtgctgctgtcgctggtgtgcgtcgcgctcatcggggcctacgcgtaccctccgcgccgctactccgcgtgctacttcttcgcttcgagcgtctgcactcctttcaaggattggctccctactgtgacccgacgggagcgaacagacgaagagatcgtctcgtctgttgttatgagggatctccttgcaatgcccatgcctgtctcgaagaatccaaagattgccttgatgttcttaacaccaggttcattgccctttgagaaactatgggagaaatttctacagggtcatgaggatcgatattccatttatatccatgcatcgcgtgaaagacctgtacattctagttctttgtttgttggccgagagattcatagtgaaaaggttgtatgggggaggatttcaatggttgatgcggagaagaggctgctagcaaatgcattggaagatgttgataatcaatttttcgtcttgctatcggacagctgtgttccactacatacatttgattacatatataattttttgatgggaacaaacgtcagcttcattgattgcttccttgatcctggaccacatggaagcggaaggtattctgtggaaatgctccctgaaatagaacagagggacttcaggaagggtgcccagtggtttgctgtaacacgaaggcatgctttactgattttagcagaccacctttactacaataagttcgagctgtattgcaagccagcagagggacgcaactgtattgctgatgagcattatttgccaaccctcttcaatatggtagatcctggtggaatctctaattggtcagtgacacatgttgattggtctgaaggaaaatggcatccaaggtcgtatagagctattgatgttacctatgcactcttgaagaacataacggctatcaaagagaacttccgtattacaagtgatgataagaaagttgtgacaatgacaccctgtatgtggaacggaacaaagagaccatgctacctttttgctagaaagttttacccagaagctctcaacaacctactgaagcactccagctacacgtccacttga</cdnaseq>

Protein Sequence

<aaseq>MKASQVWQRGSKDMTAMPPPRQRGAAKKPMWIIVLLSLVCVALI GAYAYPPRRYSACYFFASSVCTPFKDWLPTVTRRERTDEEIVSSVVMRDLLAMPMPVS KNPKIALMFLTPGSLPFEKLWEKFLQGHEDRYSIYIHASRERPVHSSSLFVGREIHSE KVVWGRISMVDAEKRLLANALEDVDNQFFVLLSDSCVPLHTFDYIYNFLMGTNVSFID CFLDPGPHGSGRYSVEMLPEIEQRDFRKGAQWFAVTRRHALLILADHLYYNKFELYCK PAEGRNCIADEHYLPTLFNMVDPGGISNWSVTHVDWSEGKWHPRSYRAIDVTYALLKN ITAIKENFRITSDDKKVVTMTPCMWNGTKRPCYLFARKFYPEALNNLLKHSSYTST</aaseq>

Gene Sequence

<dnaseqindica>714..1097#1217..1315#1908..2008#2091..2162#2574..2664#2867..2947#3496..3552#3638..3760#3862..3900#4117..4242#agatgatctgaccaagaggagaagaagaagagagaggatcccaaccccaccacctctcctcctcctcctctctctctctccgatctgcctcgccgccgccgcggctgctcttctcctctcgcctcgcctcgtgcgcgcggcgagttcgacctcctcctcctcctctccgagcccccgcctcccctggctgcgggcggggggtttcgagggggtggacgcggcctccgtgtcggcttcggctcggatcgaattcaaaggtatcgctcgagctctcgctgctcttacggcggcgcttgatgagcaccgcggcgtagattgtgagatccatcgggagttgggattgatttccttccttttccaatcagtttaccccggatttattttattaatttgatgatacgtgatggtttagtattattgatagcagtttgtttccaatattgattcgacgagggttctgctcaaccctatattccccacgttaggtccggctccttgcgccggtattcacagctaattgtattatgacacttagagtgtgatttgtggattaatactttgttgagtgtgattggtggattaatacaatgaataaccttgcatttgcagaagaggttggaaaccttggtggtgtagttagtgccaccgcccctgtctggagtggcatgtagttttcgcaaggctttgtttatgattttgtcgatggcgaggagatgaaggcatcgcaggtgtggcaacggggcagcaaggacatgacagccatgccccctccgcgccaacgaggcgccgccaagaagcccatgtggataatcgtgctgctgtcgctggtgtgcgtcgcgctcatcggggcctacgcgtaccctccgcgccgctactccgcgtgctacttcttcgcttcgagcgtctgcactcctttcaaggattggctccctactgtgacccgacgggagcgaacagacgaagagatcgtctcgtctgttgttatgagggatctccttgcaatgcccatgcctgtctcgaagaatccaaagattgccttgatgttcttaacaccaggttcattgccctttgagaaactatgggagaaatttctacaggtgtggcgcagatatacccatcatgtgcttctttctgtaatgaggatggagtttgtactatgtatagatgcatcaacatctagtttgtaaaatttatttgcttgaacttctgtgtgcagggtcatgaggatcgatattccatttatatccatgcatcgcgtgaaagacctgtacattctagttctttgtttgttggccgagagattcatagtgaaaaggtactaatgttcacccccacactgtgtacttgtttgtttcttttcttgctttatcttaactcatctgcttagcaaggtgttatgaacaataagaaatgttgttatgcattgacaactgttccttttgtttatactaagaaagaagaaaattgtgttattgcttggattagttttcgatgactataagtgagattacatttgcaaccaatgacctgcatataaggcaagcttttaacaaagaaactctatgttgttaaaataaagaaaaagaaatatctaaattcaaaaagaagaagatttgagcctaggtggtggtagtgtacacaacccacacccatcagatgagctaggcttagttcacttttttttttaatctggcttgtacttcctgtgtttaggaaattccatgttggttctcctaagaagttcttactttttagtagtacattttgcagcaaataagcaaaaggactgtgatttgtcttttgaaatttttgctatcagtgattcctgtgatttcttttacatccaacatagtattttataatttgttttgcagaactaaagcattgcattgtctttgtatgtgcaggttgtatgggggaggatttcaatggttgatgcggagaagaggctgctagcaaatgcattggaagatgttgataatcaatttttcgtcttgctatcggacaggttttgtttttaaaaaactttgcctgcaaaaagaaaatgtttttgttgcactttgttaagatcctttttatttgtttgacagctgtgttccactacatacatttgattacatatataattttttgatgggaacaaacgtcagcttcattgattggtaagagcgctgaactcatattttgatccatttgacaagaggaaaatatagtacatacaagtgcaggaaatagctactttcagagcatgtaattctgctttaaaaaagttctttggtatattgattataacatttctactttaatttcatctgtgacctagagaataactgggaatatgaaaatcaggaatatttcatcatgcattttattctagatcaatcttttggcttatatttctttacaaaggaatacccttgttacatcacaagaatggtgtagaaaacgttggtgtgttttgacttaaagaatggaatgcattaacacagagctatgatcaccgcacaattttctatctcccctagtcacacatgtttgtgtgcgtttttcattgtgttttttcactctatcagcttccttgatcctggaccacatggaagcggaaggtattctgtggaaatgctccctgaaatagaacagagggacttcaggaagggtgcccaggttcatatttttacattactactttattattcttcagaatgtttactaccccaaagtttgttaggcgcttcatatattcttggtttagaggcattcttttaagtcaacatcttcagaaactaggacatttgtttgtgagaatgatgatatatcacttccatctttttatgcttttctaagttggttttcgtatgtgttgtagtggtttgctgtaacacgaaggcatgctttactgattttagcagaccacctttactacaataagttcgagctgtattgcaaggtatgttcctccttcattgattgttaattgttgatgcccatcatgctatagttcatttcacgtgtacagtgattactaagttattttggtagcatctaaacacaaatcctattactatagtgtatctagtagataaatgaaaataaatgcatcttcatggtgttcattgggaaccagccagtaacaggcatcacagtaggtaccagggtaccaggatttatcccaaagagggaaaatgataccctggtgatactgtcagaatgaagatcaaagctaggatgttagttgagatatgaaatttggaactgctattggcaattgtaaagctttagtagagatgataatttggagatgaactgaatttaagacttgtgccacttggttctaagttttaactgctttagccatatgctacaggaaatcaaaagggtgttaactcgtcaagaaaaaaaaatcgtgaagcacgtgtttcatatcgttgaaataatgtatatatacataatgttatttaatacaccaatttttttctgcttttttgtgttctgcagccagcagagggacgcaactgtattgctgatgagcattatttgccaaccctcttcaatgtcagtaaataatattttgaattgatatttagctttcttcttggtcccttgcttttctttcatatgctttcactttcatcttcagatggtagatcctggtggaatctctaattggtcagtgacacatgttgattggtctgaaggaaaatggcatccaaggtcgtatagagctattgatgttacctatgcactcttgaagaacataacggtatgctctacatcggtaaatggacacatgctttcggccctttgccaattgacatgtcctctatgtgtggacacttaccaatgtactttactgttgtgtaggctatcaaagagaacttccgtattacaagtgatgataaggtaatatagcaaatcttctttttcactcaagcacaaaaacaaatataccattactaggattttggtgatgattactgtgtttgtgcacttgtctgcaaacacctgaagatatttgcttttgagtgtctgcatgcaacgcagtcaaggaatttaactaaaacatagaaatgtagctcctacatgtaatattgatatgtacatttatcactatcgcagaaagttgtgacaatgacaccctgtatgtggaacggaacaaagagaccatgctacctttttgctagaaagttttacccagaagctctcaacaacctactgaagcactccagctacacgtccacttgagctctacacgattctttgcttttggcctaggaattccctaggatttatttcttcttctattttatgtaaattgtgaaattgatatttagctgcgtaacacagattcagggccagagacatatcaacgttgctgcggcaatggcgatgtcttgcaaattctgagtccctaggtagggctgaggcgatatttatttagttttgatacagccctcattgtaacatgttgtgcttttttgtatgttgctatgagctgctcttcacgcccacattttctctcttttctttctagtttcctagctcctcccatctgttgaggaataggcgtttttgtcagattggaactgttattatatgatccattctttgtagacatgaagagattattatgacaccagcacaaccttacagttaatctgccctcttgagttttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0175500, RefSeq:Os02g0175500