Os02g0178100

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0178100| Description = CCT domain containing protein| Version = NM_001052609.1 GI:115444588 GeneID:4328490| Length = 1566 bp| Definition =...")
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Gene Name

Os02g0178100

Description

CCT domain containing protein

Version

NM_001052609.1 GI:115444588 GeneID:4328490

Length

1566 bp

Definition

Oryza sativa Japonica Group Os02g0178100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4315388..4316953

Sequence Coding Region

4315780..4315956,4316060..4316188,4316282..4316581

Expression

GEO Profiles:Os02g0178100

Genome Context

<gbrowseImage1> name=NC_008395:4315388..4316953 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4315388..4316953 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacccgtacctcggcggctcccccgagctcgcgcgcttccctcacgccgacagcgtggtgcccaaccacaacggatcggccggtcccgcgatggagctgggcttcgccggtggcggcggcgccgccgtcaaaccgtcgtacagctcctacacggcggcttccctcggcaacagcggctcgtcgtcggaggtcgggctggtgccggacgccatctgcggcggcggcggcggcggaatcatcgagctcgacttcgcgcagtccaaggcggcctacctgccatacgcctcgacccctagccatagcatgtcctcgtcgatggatatgggcgtggcggcgccggagatgagcgactgcgcggcggcggcggccgggagggcgtacgcggcggaggggagagcggcgcggctgatgcgataccgggagaagcgcaagaaccggcggttcgagaagacgatccggtacgcgtcgcgcaaggcctacgccgagacgcgcccccgcgtcaagggccgcttcgccaagcgcgccgacgaccacgacgccgccgcgccgccgccgcagatcatgctcgacttcgccggctacggcgtcgtgcctaccttctag</cdnaseq>

Protein Sequence

<aaseq>MDPYLGGSPELARFPHADSVVPNHNGSAGPAMELGFAGGGGAAV KPSYSSYTAASLGNSGSSSEVGLVPDAICGGGGGGIIELDFAQSKAAYLPYASTPSHS MSSSMDMGVAAPEMSDCAAAAAGRAYAAEGRAARLMRYREKRKNRRFEKTIRYASRKA YAETRPRVKGRFAKRADDHDAAAPPPQIMLDFAGYGVVPTF</aaseq>

Gene Sequence

<dnaseqindica>393..569#673..801#895..1194#gcggcgcgtgcgcggtggcgccggcggcggtgcactgccggacgtgcgacggcgacggcggcggaggtgggtatctgtgcgcggggtgcgacgcggagcatgggagggcggggcacgagagggtgtgggtgtgcgaggtgtgcgagctcgcgccggcggcggtcacctgcaaggccgacgcggcggcgctgtgcgccgcctgcgactccgacatccacgacgccaacccgctggcccgccgccacgagcgcgtccccgtgcatccgatcgggtcatccgccgccccgccgccggacgcgctcctgctcggcggggagaacgacgccgctgccgccgtcgacggcggcggcggcggcaaggaggtgaagctggacttcctgttcgccgacttcatggacccgtacctcggcggctcccccgagctcgcgcgcttccctcacgccgacagcgtggtgcccaaccacaacggatcggccggtcccgcgatggagctgggcttcgccggtggcggcggcgccgccgtcaaaccgtcgtacagctcctacacggcggcttccctcggcaacagcgtaagctcttgcccttctcttcctcgatcgcgtcaagaacaccttgcatactcgatcgatcgatcgcttacatctccaatttgtatttctttcgatcgagcagggctcgtcgtcggaggtcgggctggtgccggacgccatctgcggcggcggcggcggcggaatcatcgagctcgacttcgcgcagtccaaggcggcctacctgccatacgcctcgacccctagccatagcgtaagctctcgcaagcacgccatgaacacaagaaatcacctcaagttttatcaagatccaaccatctaactagtctgttttttctgtaaccagatgtcctcgtcgatggatatgggcgtggcggcgccggagatgagcgactgcgcggcggcggcggccgggagggcgtacgcggcggaggggagagcggcgcggctgatgcgataccgggagaagcgcaagaaccggcggttcgagaagacgatccggtacgcgtcgcgcaaggcctacgccgagacgcgcccccgcgtcaagggccgcttcgccaagcgcgccgacgaccacgacgccgccgcgccgccgccgcagatcatgctcgacttcgccggctacggcgtcgtgcctaccttctagtgttctagctcatcgatctgaacgttttttgagctggcaaattgatcaagctggcgttgcatacgtacaacgtagtacttcaattcaccatgcataggattagccaaagttctagttgatcacaattcacaaacttgaaagttttttttacctagcctgattgagttttaggctagtttctgcaatcgtgtttgctagaacggctataactagttgtagttaatctggattttctgtatgtatggtgttttgtagtaccgatctgatgatgatgatgaagaaaaatatttgggcaaaatcgatcgatctcatccagtttctaattaacatgcatgcgatcgatcgattgcgcgcgagatctggattgagatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0178100, RefSeq:Os02g0178100