Os02g0178500

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0178500| Description = Similar to DEM2| Version = NM_001052612.1 GI:115444594 GeneID:4328493| Length = 3493 bp| Definition = Oryza sativa ...")
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Gene Name

Os02g0178500

Description

Similar to DEM2

Version

NM_001052612.1 GI:115444594 GeneID:4328493

Length

3493 bp

Definition

Oryza sativa Japonica Group Os02g0178500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4334607..4338099

Sequence Coding Region

4334896..4335177,4336340..4338007

Expression

GEO Profiles:Os02g0178500

Genome Context

<gbrowseImage1> name=NC_008395:4334607..4338099 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4334607..4338099 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggctcgcacagccgggaggacctcgacctctccgactccgaggacgacgactccgcctcccacgcctccgacgcctcctccgacttcgccaccccacccccctcctcctccgccaagcccagcgccgccaagtcctcggccgcggcggccaccccggcctccatcgacgcgatcgaccgccacctccgcagcctccacctcaagtacgccgagcccatctcccccaaccctagcccctcccccacctccgccgccgcccccgccgccctcaacgccgtcaagctctacctccacatcggcggctcctccccctccgcgcgctggatcatctccgaccgcctcgccgccgcctccttcgtccgcgccggggacgacgacgacgacgacgccccctcctccggcccatggtgcctcgtcgtggggtccaagatccgggccagggtcgggcccgagctgcagctcaagacgttccccgcgcagcgccgggtcgacttcgtcgccgacggcgtctgggcgctcaagtttctccacgccgatggctacccgaatttctacgccaagtaccagagctgcctgttcgagaacagctacggcgtcgccgccaccgatgagggccgcgccaaggtgttcgggaaggattttgcggcgtgggcgcgcccggaggacggggacgagtccatctgggaggacgcgacagacgggtttgtgccgagcccgagtcgcagcccgatgccgtcgcgtagccccattctgaagccgctcatggaggacttgagggagtatgaggagccagtggaggaaggtggagggatacagagccttgcgcttggtgcattggacaacagtttcttggttggtgattcgggaatccaggtggtgaggaatttcgagcatgggatacacggaaagggcgtgtcggtcaagttctccggagggagcacaaacttctcgacacccaagaaggcgcttcttatgcgtgcggagacaaacatgctcctgatgagcccggcaactgatgggaagcctcatgccaagggtgtccatcagctggacattgagaccggaaaggtcgtctcagaatggaaatttgggaaggacggagcagatattaacatgagggatatcacaaatgattccaagggtgcgcaaatggacccatcagagtctaccttcttggggcttgatgacaacaggttatgccgttgggacatgagggaccgtcgggggattgtgcagaacatagccagtgctacagagtcgccggtcctgcaatggacacaggggcatcagttctctaggggcaccaacttccagtgtttcgcgtcaacaggagatgggtcaattgttgttggttcacttgatgggaaagtccgtctgtactcgaagagttctatgagaatggcaaagacagccttcccagggctgggttcaccaattactcatgtcgacgtcacctacgatggaaagtggatcctcggaactactgacacgtacttgattcttatatgcaccatcttcattgacaaggatgggaaggaaaagacagggtttggagggaggatgggcaacagaattgctgccccaaggttgctcaagctgaccccgcttgattcacatcttgctggacagaataatatattccgtgaagggaggttctcatgggtgaccgagaacgggaagcaggagaggcatctggtggcgacggtggggaagtacagcgtggtgtggaacttcctccaggtgaagaacagccaccacgagtgctaccagtgccaggaggggctcaagagctgctactgctacaaggtgatccccaaggacgagtccatcgtcgccagccgcttcatgcacgagaagtacgccgtcagcgacaccccggaggcgccgctggtggtggccacccccatgaaggtcacctccttcagcatctccagcaagcactag</cdnaseq>

Protein Sequence

<aaseq>MGGSHSREDLDLSDSEDDDSASHASDASSDFATPPPSSSAKPSA AKSSAAAATPASIDAIDRHLRSLHLKYAEPISPNPSPSPTSAAAPAALNAVKLYLHIG GSSPSARWIISDRLAAASFVRAGDDDDDDAPSSGPWCLVVGSKIRARVGPELQLKTFP AQRRVDFVADGVWALKFLHADGYPNFYAKYQSCLFENSYGVAATDEGRAKVFGKDFAA WARPEDGDESIWEDATDGFVPSPSRSPMPSRSPILKPLMEDLREYEEPVEEGGGIQSL ALGALDNSFLVGDSGIQVVRNFEHGIHGKGVSVKFSGGSTNFSTPKKALLMRAETNML LMSPATDGKPHAKGVHQLDIETGKVVSEWKFGKDGADINMRDITNDSKGAQMDPSEST FLGLDDNRLCRWDMRDRRGIVQNIASATESPVLQWTQGHQFSRGTNFQCFASTGDGSI VVGSLDGKVRLYSKSSMRMAKTAFPGLGSPITHVDVTYDGKWILGTTDTYLILICTIF IDKDGKEKTGFGGRMGNRIAAPRLLKLTPLDSHLAGQNNIFREGRFSWVTENGKQERH LVATVGKYSVVWNFLQVKNSHHECYQCQEGLKSCYCYKVIPKDESIVASRFMHEKYAV SDTPEAPLVVATPMKVTSFSISSKH</aaseq>

Gene Sequence

<dnaseqindica>2923..3204#93..1760#ccatttccttccgctcccaaatttcaaattccctccccttccccctccccctccccctcctcgccgaaaccctaatcgccgccgccgccgccatgggaggctcgcacagccgggaggacctcgacctctccgactccgaggacgacgactccgcctcccacgcctccgacgcctcctccgacttcgccaccccacccccctcctcctccgccaagcccagcgccgccaagtcctcggccgcggcggccaccccggcctccatcgacgcgatcgaccgccacctccgcagcctccacctcaagtacgccgagcccatctcccccaaccctagcccctcccccacctccgccgccgcccccgccgccctcaacgccgtcaagctctacctccacatcggcggctcctccccctccgcgcgctggatcatctccgaccgcctcgccgccgcctccttcgtccgcgccggggacgacgacgacgacgacgccccctcctccggcccatggtgcctcgtcgtggggtccaagatccgggccagggtcgggcccgagctgcagctcaagacgttccccgcgcagcgccgggtcgacttcgtcgccgacggcgtctgggcgctcaagtttctccacgccgatggctacccgaatttctacgccaagtaccagagctgcctgttcgagaacagctacggcgtcgccgccaccgatgagggccgcgccaaggtgttcgggaaggattttgcggcgtgggcgcgcccggaggacggggacgagtccatctgggaggacgcgacagacgggtttgtgccgagcccgagtcgcagcccgatgccgtcgcgtagccccattctgaagccgctcatggaggacttgagggagtatgaggagccagtggaggaaggtggagggatacagagccttgcgcttggtgcattggacaacagtttcttggttggtgattcgggaatccaggtggtgaggaatttcgagcatgggatacacggaaagggcgtgtcggtcaagttctccggagggagcacaaacttctcgacacccaagaaggcgcttcttatgcgtgcggagacaaacatgctcctgatgagcccggcaactgatgggaagcctcatgccaagggtgtccatcagctggacattgagaccggaaaggtcgtctcagaatggaaatttgggaaggacggagcagatattaacatgagggatatcacaaatgattccaagggtgcgcaaatggacccatcagagtctaccttcttggggcttgatgacaacaggttatgccgttgggacatgagggaccgtcgggggattgtgcagaacatagccagtgctacagagtcgccggtcctgcaatggacacaggggcatcagttctctaggggcaccaacttccagtgtttcgcgtcaacaggagatgggtcaattgttgttggttcacttgatgggaaagtccgtctgtactcgaagagttctatgagaatggcaaagacagccttcccagggctgggttcaccaattactcatgtcgacgtcacctacgatggaaagtggatcctcggaactactgacacgtacttgattcttatatgcaccatcttcattgacaaggatgggaaggaaaagacagggtttggagggaggatgggcaacagaattgctgccccaaggttgctcaagctgaccccgcttgattcacatcttgctggacagaataatatattccgtgaagggaggttctcatgggtgagtatagccttccacttcatttcaatttacttttttgtgcattaaccaagatcaattcacatggttaaaactgtcttttgttatctcgcgcattctgaaaccatgaatttatgaaggtgtatatccacaatcccacataatgtgtacatagtaatcatttgaagttgttcagccatttgcttgtgcaaaaccgtattgtaggtttgtagctttcgctcattaaaattgatcatgcctactgtgattcgggtattgtgtatgacattggcaatttgaccaaaatagtgatcgatgaattggatttgattggcaacacatatgttattatttctcttatgaccaaatcccaacttatattttagcttcttgaagtataccatgaaaaagtgctaaaatgttttgttttcgcaatgtacgcatgctgttaaaaactagtgactcactttaagctgttcgtgtcaaccttttacttgcataagtttgacaacgaggggtagttgctaaaagcctaaagctttacactggggtttcacatcttattttgatgctcagcagtagcacacattttgtgctgtagagtaaatatatggtggaaactatgtagaacaaagcacgaatgttctcaaaacatcacaaaacaatcgaatatgtagctaagataatatttgacaccatacaaaatctgagggtgaaatttgactacgtttgatagataattgataaataatggacaaaaagacaatcaggaatagtttctttctcttcgctgtttgttagtctcataccttgtgaatgtacacgagcttgatcttgaacttttatatggttacctaaatagtataacattacctatatgtgagttttgtcttagacttctctgataagttttgtgcataatttccaagtttccaccttagtaatggtttccacttgcatgttttccccatattttgtggtgtatgcgtagctaagaaatgccggagtgttgtatgtttgatcaaccatgatacgttgaaaaccagctctcttgggaatttggaagtattattagtcattatgaaactagaatacaaatgctgatgcgtttacatcgttggttttgttgcatcctgcaaacccaaaaattcatgtttgtgaatgtgctgtgtgggcggtgtaggtgaccgagaacgggaagcaggagaggcatctggtggcgacggtggggaagtacagcgtggtgtggaacttcctccaggtgaagaacagccaccacgagtgctaccagtgccaggaggggctcaagagctgctactgctacaaggtgatccccaaggacgagtccatcgtcgccagccgcttcatgcacgagaagtacgccgtcagcgacaccccggaggcgccgctggtggtggccacccccatgaaggtcacctccttcagcatctccagcaagcactagcatctcgcctttctgctacgacatttggcggtttgtcgtccgtcccatatgttgtcttgtaacactcactacagatgaaccgtgtgccctttggtttgcctttaacctctcttcttttcttttcttttttacctttgtttttttacattatataagtacgatgatgatcatcatcaattcagcatcatcgtctatgggttgtgcttttgtttttcaagtacgatgataatcatcatcgtcatgagttgtgcccaggtttctatgtactccatatattgtagtattgacg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0178500, RefSeq:Os02g0178500