Os02g0180000

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0180000| Description = Similar to Protein phosphatase type-2C| Version = NM_001052623.1 GI:115444616 GeneID:4328505| Length = 4530 bp| Def...")
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Gene Name

Os02g0180000

Description

Similar to Protein phosphatase type-2C

Version

NM_001052623.1 GI:115444616 GeneID:4328505

Length

4530 bp

Definition

Oryza sativa Japonica Group Os02g0180000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4450270..4454799

Sequence Coding Region

4451627..4451743,4452197..4452260,4452386..4452494,4452607..4452760,4452840..4452965
,4453055..4453178,4453257..4453333,4453442..4453494,4453673..4453727
,4453833..4454017,4454110..4454134

Expression

GEO Profiles:Os02g0180000

Genome Context

<gbrowseImage1> name=NC_008395:4450270..4454799 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4450270..4454799 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaatctacctcagtacccccaaaaccgataagttctctgaagacggggaaaatgataagcttaaacttggtctttcgtctatgcaaggatggcgtgcaaacatggaagatgctcattcagcattgctaaatcttgacaatgagacatcgttctttggtgtttttgatggccatggaggaagagtggttgccaaattctgtgcaaaatatttacactctcaagttctcagaagtgaagcctattcagctggtgacttaggcactgctgttcatagagctttcttcaggatggacgaaatgatgcgaggacagagaggctggagagaactatctgcacttggagataagataaacaagattggtggtatgattgaagggttgatttggtctccgagaggcagtgattcgaataatggacaagatgattggtctttcgaagagggaccccactccgattttgctgggccaacatgcggatgcacagcatgtgtagcgctaataagaaataaccaacttgttgtggcgaacgctggtgattcccgttgtgttatttctagggctggccaggcatacaatttgtcaagagaccacaagccagagcttgaagctgagagagacagaatagtaaaagcagggggtttcattcatatgggacgaataaatggaagtttaaacttgacaagagcaattggagatatggaatttaaacagaacaaattcttgcctcctgagaagcaaatcgtgactgcaaatcctgacatcaacgttgttgagctttgcgacgacgacgactttcttgttttagcatgtgacggcatttgggactgcatgtcaagccaacagctggtggatttcatccacgagcatatacagaaggagagcagtctttctgcagtgtgcgaaagagtgctcgacagatgcctagctccatcaacaattggtggagagggatgtgacaacatgaccatggttctggtgcagttcaaaaagcctattactcagaataaaaaagccgacgtaggggagcaatctgtgaaaggtgtggaagaggctgagatcaatgctgctgaggagaatggttcttga</cdnaseq>

Protein Sequence

<aaseq>MGIYLSTPKTDKFSEDGENDKLKLGLSSMQGWRANMEDAHSALL NLDNETSFFGVFDGHGGRVVAKFCAKYLHSQVLRSEAYSAGDLGTAVHRAFFRMDEMM RGQRGWRELSALGDKINKIGGMIEGLIWSPRGSDSNNGQDDWSFEEGPHSDFAGPTCG CTACVALIRNNQLVVANAGDSRCVISRAGQAYNLSRDHKPELEAERDRIVKAGGFIHM GRINGSLNLTRAIGDMEFKQNKFLPPEKQIVTANPDINVVELCDDDDFLVLACDGIWD CMSSQQLVDFIHEHIQKESSLSAVCERVLDRCLAPSTIGGEGCDNMTMVLVQFKKPIT QNKKADVGEQSVKGVEEAEINAAEENGS</aaseq>

Gene Sequence

<dnaseqindica>1358..1474#1928..1991#2117..2225#2338..2491#2571..2696#2786..2909#2988..3064#3173..3225#3404..3458#3564..3748#3841..3865#tttcatccatttttccgctctctctctctccgaatgcgcgtgatctcgcactcgcagcctcagcatcagctgcatcactccccgcctctccgcgatcgcaagggccgcgccgatcccccccgcaccagaagccctcgagattccgatctcccagaaaacctccgcctcgcagcgcgacggatccatccatctcgccacctttctcccacaaggtataaattcttgtttctttgctcgctctgcttggttttgcggttcttgttgctgtaattctggtggcggctgtgtccttttgttcggtctgggaattcggttttgctgggttggttaatttcttgtgttgtcatttcgcgcgtcattttccattgtgtacagtacagagcagtcgattttgcacggatctcgtacaggtgagtggtttgggggttagttagaggaagttatcttttatatcgagttggatggtgaaagtgaaacctcacccaactcaggtggtggtctaaggggaagaaaaaaagatatctttgttggtataggtatagccccttgattcgttttgaatcgtgtgttttgaattccgagttagtctcattttattctcctgttacatttttgatttaggacaaataccgatgttcaattatggatgttggttggccaaacttgtcctagtttattcctgattctgtgcaattataaccttttttatttttttttgggggttgtgtcctgtgattgctgaagtatgatgcaataattgagtttttttttttgttatcacaaaggcttgaaatgtgccaaagagaagtggatgttgagacttgagactgtatccttctgtgtcctacatggtagtagtacagacacttgtgtgatgtctgttaggtttttgtttctgtttttctccatcctgttacatcagcattggtgctttgcatacctggtacatagcaatttgggcgattgcgctcttgattgtttggtttatattgttggttttgccattattgatgtcttgttggctcatcgctgttttggactcattgtacatttgttcttcttttggttctcaattcgataatggtttgccatcttgattttttttttaggaatttactagctctcggagaaactacggttgaggcttgcggtttggatgcaccttcatgtttataagaaggctcagagctacctgatataactcctgttctgtcataaacaggtgtgcttacttgtgtatgtgccatttgagtactcaactgttttctggtttctgattgctctgttaattcaatttcgtagtgatatgcctgtttctttcctcatgagttcatcttcttatgtgcagcttatcaacatgggaatctacctcagtacccccaaaaccgataagttctctgaagacggggaaaatgataagcttaaacttggtctttcgtctatgcaaggatggcgtgcaaacatggaagatgctgtgagtttaccactagaacgctaacatcattgtcagtttgggcaatacctcatttgcttaacgaaacctttataacattttgaaaatatggatatccaacttcgtatcatgattatagtttgttgctaaaaaataaatcatagttctaggtttgctgcagtctaattttcttatcatagtttcagtcattatgcataagctctcttttaccaacctgtccatatttttcaaatttagtttgcaaattaattattttcgcaataatagtagagttgatttttactgtgctggtccattagcccagtggtacagagctggttatacatagctacagcagtaaagcatgaattcttcataataatttaaaatactgcaatattgttcatttcaaataatcatagtttgctgaaatcccctctcatggagtgcttgatgttttgcaaattactgcagcattcagcattgctaaatcttgacaatgagacatcgttctttggtgtttttgatggccatggaggtacgcagtagttgcaaatatcatctgcatgtttgctcatagtactcgtgtgagctatcctatgttttatagatccatactttcaatgttgcacatattatcctcatattccttgtttccctcaggaagagtggttgccaaattctgtgcaaaatatttacactctcaagttctcagaagtgaagcctattcagctggtgacttaggcactgctgttcatagagctttcttcaggtatatgggtcattagattaccataatagataatatgaggattagaatcttacttttaattattgccaacatgaagataataatgattaattctgttgatgtactacttcaggatggacgaaatgatgcgaggacagagaggctggagagaactatctgcacttggagataagataaacaagattggtggtatgattgaagggttgatttggtctccgagaggcagtgattcgaataatggacaagatgattggtctttcgaagaggtatttatgcaacacaagtgcatcaacaaacttatctccccaaaacaagctactatctcacatcatattccattatcagggaccccactccgattttgctgggccaacatgcggatgcacagcatgtgtagcgctaataagaaataaccaacttgttgtggcgaacgctggtgattcccgttgtgttatttctagggctggccaggtctgttaaaagttttcatcattttagttatgtttacttgtgaacgtatgtatggcagtctgagtgacttttctttaagtgtgtaataggcatacaatttgtcaagagaccacaagccagagcttgaagctgagagagacagaatagtaaaagcagggggtttcattcatatgggacgaataaatggaagtttaaacttgacaagagcaattggtatatatttttacttgctcatctgttaataagccacatatcactcggtgtcttaagcgtgtgcatacctccttgtaggagatatggaatttaaacagaacaaattcttgcctcctgagaagcaaatcgtgactgcaaatcctgacatcaacgttgtaagcactctggttctgaatgatgtacctaccttcaatttctgcacttaatcatgatcggctttgatcaatcaatccttccataatatcataaattattattcttaggttgagctttgcgacgacgacgactttcttgttttagcatgtgacggcatttggtgagaatctctacctgcaattttttatatacacttgttatatcattcattactgttttgtactgttttgcacgcagctgaagtgcattattcgtattctctagccacagttaaaagtacttttcttctgacttacctagtgttcctgacataaataacaagattgtatgatgaacagggactgcatgtcaagccaacagctggtggatttcatccacgagcatatacagaaggtaagttaattttccttttctaattccaaataccaacagtgaactttggaggaggctgtagtacttaccaattcagtacttgccgtgtgaaaaaacaaaatgcaggagagcagtctttctgcagtgtgcgaaagagtgctcgacagatgcctagctccatcaacaattggtggagagggatgtgacaacatgaccatggttctggtgcagttcaaaaagcctattactcagaataaaaaagccgacgtaggggagcaatctgtgaaaggtgtggaagaggctgagatcaagtgagtagaccttcatgccaccatatctttctttcatcaatcattttatgtaaccccttgtcagtgcactaactcgaaagctttgtgaccagtgctgctgaggagaatggttcttgacgccgatgattatgcagacatttgctttcataagcaggccgagtggagcagcagtcactgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatagatatatatatatatatatatatatatatatatcaattgtttgtcaaatgatgtatctgcacacattctgctcaagaactcggagataaatggcactgaatggagcaactgtgaaaacctaatgcgcagtttttgtgcgccatccaccattcgttgtcatgccaaaaagttgaccgtcctgattgtggatatgatcacaattgtcgacaattagaactgatcaagttgctgttttctgttctttgcatacgctgtaaacgtgggcgagttttttgttctgctgtttttttttgggtgtgtgcgtgtgatagatatgtcaattgcaattcatgccccatttgggttattgcttcagatcatgtccaatctgaatccagtttatcatgtgatatctgttggttagttcagtgccgtgctgctgcggtgctgccctggtgtggtgaaaatgtatgcctgttatgcatatggaagtatggaacaatttggggattttgcaaaaaggaggcaatgcaattacatttcatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0180000, RefSeq:Os02g0180000