Os02g0181800

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0181800| Description = Similar to Ubiquitin fusion degradation 1-like| Version = NM_001052630.1 GI:115444630 GeneID:4328514| Length = 3525 ...")
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Gene Name

Os02g0181800

Description

Similar to Ubiquitin fusion degradation 1-like

Version

NM_001052630.1 GI:115444630 GeneID:4328514

Length

3525 bp

Definition

Oryza sativa Japonica Group Os02g0181800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4563070..4566594

Sequence Coding Region

4564016..4564018,4564166..4564243,4564764..4564788,4564870..4564902,4565034..4565155
,4565230..4565360,4565509..4565732,4565824..4566065,4566268..4566357

Expression

GEO Profiles:Os02g0181800

Genome Context

<gbrowseImage1> name=NC_008395:4563070..4566594 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4563070..4566594 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccctgcgtctttcattgacaagcctcagcttgaaactggtgacaaaattattatgccaccttctgctctggatcgtctagcatctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccatattggatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagcaatcttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatcagtattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctgagcgacaaaaagctgctgttcctccaagtacagcgcctactgctgaagaggcagctgaagaagaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaagataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtgcagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagcttgtttttggccctggtgggaaccgcacatctaaggaaacagaaaaggtgcctgaaaaggaaccgaaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatactcattgaagggctga</cdnaseq>

Protein Sequence

<aaseq>MYFEGYGYRGSTFEQTYRCYPASFIDKPQLETGDKIIMPPSALD RLASLHIEYPMLFEVHNAAAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLTEGDMVFI KNANLPKGTYVKLQPHTTDFLDISNPKAILEKTLRNYSCLTTGDSIMVAYNNKKYYID IVETKPSNAISIIETDCEVDFAPPLDYKEPERQKAAVPPSTAPTAEEAAEEEPKFIPF TGPGRRLDGKAPKDKDVSASSPAKRQANATNSVQPSTASTSQSSSSRKTTEKLVFGPG GNRTSKETEKVPEKEPKEDPKKDEPKFSAFTGRKYSLKG</aaseq>

Gene Sequence

<dnaseqindica>947..949#1097..1174#1695..1719#1801..1833#1965..2086#2161..2291#2440..2663#2755..2996#3199..3288#gctttcctttcttccgatccaagctactctctctctcctctcctcccctcccctcaccaagcgagccttctagagagagagagcttcccccggggggatcgagctcgccggaggactccacccgccgcgcctcggctgccgggagatccccccgcccgcccgccggtccgtccaacggtaagtctcgccttcttcgctcctccctgatttctcaccggcgatcgatcgatcgatcgatcccccgcgcgcgctcgagccgtcgccggagcctgggtgggtcgggaatcgcggcggcgtacggagtgagagatggtgtggtgtggtagggtagggtggatggagcacggctcgtcgttgaattaggggggaggagaaaaaaagggagggatttttatgcgtttttttggtgagggggaaatcggctgctgtctcgtgcgagatgtgctgctataagtggcaaatgtcaagtgccggattttcgttttgcgttttgccctggttggggttgggttactcatccctctactgaattggcatgtactactatttcaagctaatttgcttgttagaactatatatgttcagataccttttttgtggctgcacagtgtgtgtgagttttttttatcttaaaaactgtcattagaaggcatcatggcacaacagataagagaagtgcattgccaatgctgcaaacgggattgcggcaacgcaagcttgcagtgttgcctgtggctaatcttgatgatgctgatgatggtgatagtgtctaacataagttctgaacttttcttgtgtattgacaaaaccatcaccagcttgcatgtaattcatcttccatctgtgatagttttgtactccctagttttcttcaccatgctaatttcaatattcttgtttctgctatgctaggaattgaaaggaggtagccttcttgtcagctagtatggtaagttctctagcagaaaattgattttactacagcttcccagtttatctgccgcaccaagttaacttgtggattcggaggatctctttcttgcaatcctttgtttctacccaaagtttgatgttctaatatatctgtaataaatagtatttcgaaggctatggctaccgtggaagtaccttcgagcagacatatcgctgctaccctgcgtctttcattgacaaggtttgtctactgtcttcagataggctccatttactcatgccactggtataatgttagggtggtaaatcaggttgtttctagctttctttttctaatctaaagtatcaacataacatactgatgctatattgatatgtaaacatttcctcttttcctgtccttattgctttgtggcgttgtttttgcctctagcataatatgttgacatcctttgaactgcttaagtagaatctacttcctccgattcatattataagactttctagcattgcccatattcatatatatgttaatgaatctagacatatatgtgtgcctagattcattaacatctatatgaatgtgggtaatgctagaaagtcttataacctcaaacggagggagtagcagttaatacttctaggaaatttcttctaaaaaaagttagaggaaacaatcacatttcaagataaagcatctagtttttcattcctggatatttcttctaaaatatcttcttttttttttttaccctttgcagcctcagcttgaaactggtgacaaaagtatgctctctgttcattgattcatcatctgttaagttgattttggaaattgaactaagtattactttattttcttttcagttattatgccaccttctgctctggatcgtctaggtaagtttagttgtgttagataatctctttcttcttggaaacgcatgatgatgattcatctcgtctgctctcacaagctttccatgctctattttctggtaacttctctaatctattctatcactatgcagcatctctgcatattgaatatcctatgctatttgaagtccacaacgcggcagcagaacggacttcacactgtggtgtcctggagttcattgcagaagaaggcatgatctacatgccatattgggtatggacatgtttagaataacgttgcaattacttttatgcgattccaccaaagctaactctattactcatcagatgatgcaaaatcttcttctaacagagggggatatggtgttcataaaaaatgccaatctccctaaaggaacatatgtgaagctgcagcctcacacaacagacttcttagacatttcaaacccaaaagcaatgttagtattgtttggtaaattattttctgttcttttcttttgctatcacttcatgtcttcatatactattgtgttgtgattggatcttatggtttgactaatgagatccctgaagaacagtaacaagccatttatgccattcttgcagcttggagaaaacattgcggaattactcttgtctaaccactggtgacagcattatggtagcatataataacaagaaatactacattgatatagtggaaacaaagccttccaatgctatcagtattattgagaccgactgtgaagtcgactttgctccaccacttgactataaagaacctgagcgacaaaaagctgctgttcctccaagtacagcgcctactgctggtagatttctctttatgccccgttattgatcttgatctcttccctcagattctcttgctgttcattactttaagatttattcgttttgcagaagaggcagctgaagaagaaccaaagttcatcccctttactggacctgggaggcgtctggatgggaaggctcctaaagataaggatgtatcagcttcatcccctgcaaaacggcaagctaatgcaacaaacagcgtgcagccctcaacagcgtccacatcacagagcagttcatctcgtaaaaccacggaaaagcttgtttttggccctggtgggaaccgcacatctaaggaaacagaaaaggttggtatttttgcaatttatgcacctattggcagctgtctggaaaacgagtgctagttttggagctacttgagatgcaagaacctctagtgaccaatgttatctaaaacagctctgtcgattagagaaggcataataagttattgcttcgatgtgtttgacacacttttttttaccataatttgttttattttcaatgtaggtgcctgaaaaggaaccgaaggaggatcccaagaaagatgaaccgaaattctcagcttttacaggaaggaaatactcattgaagggctgatagccagatagtgtattatcacttatcagtatttccagagacagacatgattatggagaaggagtttgattgtttagttacctccttgaagcctcttttggttggaccagtggcatctttgaatgtttaatttctgtcttaactatgaatcatcctcgtgccagcaacggagaggcaactgatgtataaaaaaaatctattcatgcctgtttatggatttgtactgagcttgtctgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0181800, RefSeq:Os02g0181800