Os02g0182100

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Revision as of 02:15, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0182100| Description = Similar to Two-component response regulator ARR1| Version = NM_001052632.1 GI:115444634 GeneID:4328516| Length = 442...")
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Gene Name

Os02g0182100

Description

Similar to Two-component response regulator ARR1

Version

NM_001052632.1 GI:115444634 GeneID:4328516

Length

4427 bp

Definition

Oryza sativa Japonica Group Os02g0182100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4573828..4578254

Sequence Coding Region

4574147..4574200,4574653..4575693,4576088..4576164,4576265..4576657,4577230..4577382
,4577938..4578100

Expression

GEO Profiles:Os02g0182100

Genome Context

<gbrowseImage1> name=NC_008395:4573828..4578254 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4573828..4578254 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacggtggaggagaggcaggggagggtgggaggccatggtgtgagcggcggcggcggcgggagagaccagttcccggtcggcatgcgggtgctcgccgtcgacgacgaccccacctgcctcaagatcctcgagaacctcctgcttcgatgccagtatcacgtgacaacaactggtcaggcggccacggccctgaagctgctcagggagaacaaggaccagtttgacctggtgatcagcgacgtccacatgccggacatggatggcttcaaactccttgagcttgtcggcctcgagatggacctcccagtcattatgttgtctgcgaacggggaaacacaaactgtcatgaagggtataacccatggtgcatgtgactatcttctgaagccagtgcgtcttgagcagctaaggacgatatggcaacatgtgattaggcgtaagaattgtgatgctaagaaccgtggtaacgatgatgacgctggtcagaaggcacagggaatgaacaatgaaggtgagagtattggtgctaaccgcaacaagaggcagtcacggaaaagtagagatgagaatggagatgatggtgatgattctgatgagaacagtaatgagaatggagactcatcaacacagaagaagccaagggtcgtgtggtctgttgagctgcaccgaaagtttgtggctgctgttaaccagcttggcatcgagaaggctgttccaaagaaaatattggatctcatgaatgtagagaacatcaccagggagaatgttgctagtcatttgcagaagtatcggctgtaccttaaacggttgagcactgatgcaagcaggcaggctaaccttgcagctgcatttggaggaaggaaccctgcttacataaacatgaattcatttggaaactacaacgcatatggtagataccgtacagtcccaactgctggccatacccaggcaaacaacattcttactaggatgaactccccttctgcgtttggtgttcatggtttgctgcattcacagccaattcagttaggacatgcccaaaataatctgagcacttcactgaatgatttaggagggcttaataatggtaacatgatcagaggtgcacagatgtcaacaattctaactggtccttctggtaactcctttccaaacatatcgaatggtgcaccgctggcaactgcaaacagatcactgcaacctcttgagtcgagcaatcagcaacaccttagtcgggtgcattcatcttctgcagatccatttagcacacttgttggtgagtctccccagtttcctgatcttggaagaaccaccaatacttggcaaactgcggttccatccaacattcaggatcgtggtcacaatgataacatgtcgcaagccaccctgcatatgaatggccccaaaattgaacctgtctcaagcttcacatcatccaatcagattccgctgctgggaaatgagatgcagggccaagtagcatcactagctagcaatgttccaatagcattcaatcaggacacatcaccattcaactatggaagcagcacaaactcaagagacatgctaaataacagccatgtatttagtaactccagcatcaacacatcgttgcccaaccttagcttagacaatccggctgtaccaaggcagacactggatcgtgggaatacgggcattgtttctcccatgcaagatggaaggattcatcaccaagctgttagcaatcagctaaactataatgacgatcttatgcggacaactgggctgcaaaggggtctcagtggtggtctagatgacattgttgttgacatgtttaggccggaccgcgaagacgacggcgttccttacatcgatggggactgggagctggtctag</cdnaseq>

Protein Sequence

<aaseq>MTVEERQGRVGGHGVSGGGGGRDQFPVGMRVLAVDDDPTCLKIL ENLLLRCQYHVTTTGQAATALKLLRENKDQFDLVISDVHMPDMDGFKLLELVGLEMDL PVIMLSANGETQTVMKGITHGACDYLLKPVRLEQLRTIWQHVIRRKNCDAKNRGNDDD AGQKAQGMNNEGESIGANRNKRQSRKSRDENGDDGDDSDENSNENGDSSTQKKPRVVW SVELHRKFVAAVNQLGIEKAVPKKILDLMNVENITRENVASHLQKYRLYLKRLSTDAS RQANLAAAFGGRNPAYINMNSFGNYNAYGRYRTVPTAGHTQANNILTRMNSPSAFGVH GLLHSQPIQLGHAQNNLSTSLNDLGGLNNGNMIRGAQMSTILTGPSGNSFPNISNGAP LATANRSLQPLESSNQQHLSRVHSSSADPFSTLVGESPQFPDLGRTTNTWQTAVPSNI QDRGHNDNMSQATLHMNGPKIEPVSSFTSSNQIPLLGNEMQGQVASLASNVPIAFNQD TSPFNYGSSTNSRDMLNNSHVFSNSSINTSLPNLSLDNPAVPRQTLDRGNTGIVSPMQ DGRIHHQAVSNQLNYNDDLMRTTGLQRGLSGGLDDIVVDMFRPDREDDGVPYIDGDWE LV</aaseq>

Gene Sequence

<dnaseqindica>4055..4108#2562..3602#2091..2167#1598..1990#873..1025#155..317#tttggtggtggtgctcgctctcgctcaccctgctttgacctttggatttttatttttaaggatccaagaaagtgctgtttcttgggttgcttggaggtggaggagtttgggagattgtttgtgtttgattgattggttgattgattggaggaagatgacggtggaggagaggcaggggagggtgggaggccatggtgtgagcggcggcggcggcgggagagaccagttcccggtcggcatgcgggtgctcgccgtcgacgacgaccccacctgcctcaagatcctcgagaacctcctgcttcgatgccagtatcacggtatgctgctaatctgcaatctctctctctctcgagctcgagcgagcgagcgagcgagttctctccatggttgtggattgagcttgtgctgtatcgatcaatttttttttcgttttggtttagtactgttctatagttgttttttttctctctctctcttggatttaatttttgttttttttggtgatgcgctagttcttctttgcttggctttcacagtttcactcgtagatgtttctgttgttcttggtggtctatttcttcggccatgtaatgtcaactcaagaacgggttttgcccctttcctcttaaaaaaagtttttttcccctctcttttcttcgatataatttcaacccttctgtctgaatctccaatcctttctactgttctttgggttgcacacatggtggttgtgtaaggattatcttctgctgaccttttttccttgttgcagcaaaatagtagtagtactaattcttttgataattttgacttgcctatgtattgtgttgttgaatctggcctgattggatttgatgtggtgtgatttgcagtgacaacaactggtcaggcggccacggccctgaagctgctcagggagaacaaggaccagtttgacctggtgatcagcgacgtccacatgccggacatggatggcttcaaactccttgagcttgtcggcctcgagatggacctcccagtcattagtaagtcatgctttgcttgatctgatgtgtcattcttgtaaccagagatagtatgttctagtaagatgcgtgtggattgcatgagatctagacatctagtgagtgattttacttcatttgaactgcttgggttgcagatacatgattatttatagcaataaggtagttagctgaaaatggcaacaagtgtgagacatggaaaactcatgaaatttcttggttcaaatctatttttggaaagctcctttctgttttactgttggtttggtgcgtaggtcaggtaaccgatgaaagtttcctaatgcgaaaatttggtagataccgtcacgtttgctcttgttagttaccctgattgccttgcacaaatgactatgatgctgtatcctcttacttctcagccagttttttttttttttttttacatttatttggaacgttctcctgcaaactgactgagaaacatcaggtcgaccaacgatgtttgcgtttatgttaacgcggatctaataacattactttgactgcattcatgaaccttaccttacattctgaattgactatctgtcatgtagtgttgtctgcgaacggggaaacacaaactgtcatgaagggtataacccatggtgcatgtgactatcttctgaagccagtgcgtcttgagcagctaaggacgatatggcaacatgtgattaggcgtaagaattgtgatgctaagaaccgtggtaacgatgatgacgctggtcagaaggcacagggaatgaacaatgaaggtgagagtattggtgctaaccgcaacaagaggcagtcacggaaaagtagagatgagaatggagatgatggtgatgattctgatgagaacagtaatgagaatggagactcatcaacacagaagaagccaagggtcgtgtggtctgttgagctgcaccgaaagtttgtggctgctgttaaccagcttggcatcgagagtaagataatttctcacaacctagctactgagaatattggctggctatttttcttagttcaatgtcatatgtgttaatatttgtatgcttgttttttcagaggctgttccaaagaaaatattggatctcatgaatgtagagaacatcaccagggagaatgttgctagtcatttgcaggtcgaatttctttccttatctttgaccgttcatttcatcatgttgtttactatggtttatcactgcaccaaattattgttattattgtcccagatatctgaaagaggattttttttaatatatgataatacagccctaaaatattcctaattcatattgttgcatgttctgtattttgttgagttctttttcagtatttgtacgagaagcaaaatataacatttatgttctcataccattttcctagtatattgattgtgcaatcgtaagtactaattcaccagtgttaaattcagagttttgctaacctattcatttcttagctattttttttcctcttgtttgcacctacaagtatacttcactgatgtttcttctctgcttgtcatttcagaagtatcggctgtaccttaaacggttgagcactgatgcaagcaggcaggctaaccttgcagctgcatttggaggaaggaaccctgcttacataaacatgaattcatttggaaactacaacgcatatggtagataccgtacagtcccaactgctggccatacccaggcaaacaacattcttactaggatgaactccccttctgcgtttggtgttcatggtttgctgcattcacagccaattcagttaggacatgcccaaaataatctgagcacttcactgaatgatttaggagggcttaataatggtaacatgatcagaggtgcacagatgtcaacaattctaactggtccttctggtaactcctttccaaacatatcgaatggtgcaccgctggcaactgcaaacagatcactgcaacctcttgagtcgagcaatcagcaacaccttagtcgggtgcattcatcttctgcagatccatttagcacacttgttggtgagtctccccagtttcctgatcttggaagaaccaccaatacttggcaaactgcggttccatccaacattcaggatcgtggtcacaatgataacatgtcgcaagccaccctgcatatgaatggccccaaaattgaacctgtctcaagcttcacatcatccaatcagattccgctgctgggaaatgagatgcagggccaagtagcatcactagctagcaatgttccaatagcattcaatcaggacacatcaccattcaactatggaagcagcacaaactcaagagacatgctaaataacagccatgtatttagtaactccagcatcaacacatcgttgcccaaccttagcttagacaatccggctgtaccaaggcagacactggatcgtgggaatacgggcattgtttctcccatgcaagatggaaggattcatcaccaagctgttagcaatcagctaaactataatgacgatcttatgcggacaactgggctgcaaaggggtctcagtggtggtctagatgacattgttgttgacatgtttaggccggtatgattctttcttgtatttattttttagaagagtattctatattggtattctgtttcagaattctattgctttgtgttgttcaagcagatcagtctttagtgacctatgaaaatttctggacacagtagtagtctatcaaacactcacttttctatggatgtgcgttactcatctctattcatatgtagtccacaagcatgttcatgtttgattccttcaagatattttctgctgcatagtaccacctttaatcctttgcagtctgcactatattattatagtatgaaacagcaacatatgtattgaaatatttcatattcgttctgaagagatttctaagtttagtttcagtaccacatatttcttaatcaatatgttaactgccatgctgggaagtacaaacaatgagtatactatgtatctgacaacgccatctttcatcgatgcaggaccgcgaagacgacggcgttccttacatcgatggggactgggagctggtctagccagcctccatttcaatcattagtccgcgtacgaggtttttctgcattcgcggtgtcggctgctgattggtccatgctcacttgtcagcacaaagtggtgttcatagtggctagccttcatcacaagtgcatttcacatttggcttcttttttcagcttagtgattattagttggccagtcagtctgtgaaatttatgtggagaaacggctatgtggtgtgtttttatcatgacttatactataataactatgttagttcaggtataaccggttatcctgataatatagtatgcttggtaaaattctcgttaatcatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0182100, RefSeq:Os02g0182100