Os02g0182900

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Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0182900| Description = Similar to BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP). Splice isoform ...")
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Gene Name

Os02g0182900

Description

Similar to BRCA1-associated protein (EC 6.3.2.-) (BRAP2) (Impedes mitogenic signal propagation) (IMP). Splice isoform 3

Version

NM_001052637.1 GI:115444644 GeneID:4328521

Length

4171 bp

Definition

Oryza sativa Japonica Group Os02g0182900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4630443..4634613

Sequence Coding Region

4632283..4632541,4632624..4632730,4633000..4633097,4633605..4633719,4633816..4633924
,4634137..4634252,4634332..4634496

Expression

GEO Profiles:Os02g0182900

Genome Context

<gbrowseImage1> name=NC_008395:4630443..4634613 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4630443..4634613 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacctccggcggcgaggacccatccggctctgcctcgtcgtccgccagcgcgctcgactccctgcccttctcctccgggaacccacgcatcgaggagacccgcggcgtcgtcctcctccaccccgaaccacccgccgcctcgtcctcgtcccttctcccggtggggaggaagccgcgggtgtgcgtgcctggcgtgcccaaccacctgacctacgccgacttcggccgcttctgcgcatcctgggcctcccacatcctcgagacgcgcatcatcaggattgatggggtggaggatcagtacggcgttcttataaaattcgacactcagagcttcacggatagcttctacatgagctttaacgggaatcggttctcatcactggagggtaatgtttgccgtgttcgttttgtggaagacgttcactacactcaattgattgagcacgcacatagctcagttacaagctcagctgaacaacctacatgcccagtatgtcttgaacgacttgaccaagatcctggaggcattcttacaacaatatgcaaccattctttccactattcgtgcatgtcaaagtgggcagactcttcgtgcccagtttgcaggtattgtcaacaagaaccagagaaatccagctgttcagtttgtggaacatcagaaaatctttggatttgtgtaatctgtggccatgttggatgtggaaggtacaaaggtggtcatgctattgaacactggaaagaaacgcaacattgttattcacttgaattagaaacacagaaggtttgggattatgctggggacaactatgtgcatcgtttgattcaatcgaaaacagatgggaatctggttgagtacaatttctatggtgatcattcagttgatggtatgtgttcaacatgcaatggtgatgcggggatcagtgaagctctgctcgacagtaaaatggaagctgtaatgtattga</cdnaseq>

Protein Sequence

<aaseq>MATSGGEDPSGSASSSASALDSLPFSSGNPRIEETRGVVLLHPE PPAASSSSLLPVGRKPRVCVPGVPNHLTYADFGRFCASWASHILETRIIRIDGVEDQY GVLIKFDTQSFTDSFYMSFNGNRFSSLEGNVCRVRFVEDVHYTQLIEHAHSSVTSSAE QPTCPVCLERLDQDPGGILTTICNHSFHYSCMSKWADSSCPVCRYCQQEPEKSSCSVC GTSENLWICVICGHVGCGRYKGGHAIEHWKETQHCYSLELETQKVWDYAGDNYVHRLI QSKTDGNLVEYNFYGDHSVDGMCSTCNGDAGISEALLDSKMEAVMY</aaseq>

Gene Sequence

<dnaseqindica>2073..2331#1884..1990#1517..1614#895..1009#690..798#362..477#118..282#actcgacacaaaacaactctagactcttctcgaggaagcaacgcctcccttgggaaaggaagagagagattttctcttcctctcgccgccgccgccgccgccgccgcggcgccggccatggcgacctccggcggcgaggacccatccggctctgcctcgtcgtccgccagcgcgctcgactccctgcccttctcctccgggaacccacgcatcgaggagacccgcggcgtcgtcctcctccaccccgaaccacccgccgcctcgtcctcgtcccttctcccggtaagccaccccctcctccccttcgatggccctcgtaatcgccttctcaatgttctcgttcgcgcgcttgtcttgccaggtggggaggaagccgcgggtgtgcgtgcctggcgtgcccaaccacctgacctacgccgacttcggccgcttctgcgcatcctgggcctcccacatcctcgagacgcgcatcatcaggtatcgtcgggtctcgattctcagttgggtgaaagcttcgctgatgataattctccgtagtagtagtagtagtagtagtagtagtagtagtagtagtagacatgggctcattgcgcgtttcgtcagacctcaaacattggccaattttggtgtgcatgagtggttctgatgtatgtgtgaattggagtgttaattggtgggtatgtttgtaggattgatggggtggaggatcagtacggcgttcttataaaattcgacactcagagcttcacggatagcttctacatgagctttaacgggaatcggttctcatcactggaggtgctggattgctttggttctgccgagcacttcgatcttctgccgctctgagtaaatgtgtgctgtgctgattgatttggggctgatgtgctgcagggtaatgtttgccgtgttcgttttgtggaagacgttcactacactcaattgattgagcacgcacatagctcagttacaagctcagctgaacaacctacatgcccagtatgtcttggtatgtggaagtcttttgagttactctagaaatttaccaaattttcatgatgtagtgttctttcagtctgttcagggaaatttggaatacctcagcagctttcagtattgtattttttaagttaaaagttagagatgttcacccacctgctttttaaaaatatcattactccctctagccacaagtacatatgccactttggacttacatgtagtcaaccttcgaaattttgagtaatggtatgccattattttttattttgatacatgaaaaccatgtgtgtatctgtctcaaagattactttcataatgttataattttatcaggtttataaatggattacaatagatattactggtcgaagtgtatattgagagttatgctgatacccaaagcatgtctatgcaaccaggagtagttttctatatttactatcttatttaagcccaaagtatagctttcgaactcacattgatcacaccatttatttgtttttattgtcaatagaacgacttgaccaagatcctggaggcattcttacaacaatatgcaaccattctttccactattcgtgcatgtcaaagtgggcagactcttcgtgcccagtaagatcttaagacaactcacttactacaggtgttttttatatatatatattagtttactaagggcatcatcatactgttctatcaacataacttttgctgtcaccaagtttctggtatctcaaatttatggcaatcaactacattattttttaaaataatacttactaggagattggttggcattctataatttgaattcattgcttctttgttttatcctggctttagaaacaaatctatgtgtgtttacagaaagtgttgtgcaggtttgcaggtattgtcaacaagaaccagagaaatccagctgttcagtttgtggaacatcagaaaatctttggatttgtgtaatctgtggccatgttggatgtggaaggtatttcatgttaattctggaagatgtgaattttactaagtaaacaacttatttgattgattggggattaacgttctcaaaggtacaaaggtggtcatgctattgaacactggaaagaaacgcaacattgttattcacttgaattagaaacacagaaggtttgggattatgctggggacaactatgtgcatcgtttgattcaatcgaaaacagatgggaatctggttgagtacaatttctatggtgatcattcagttgatggtatgtgttcaacatgcaatggtgatgcggggatcagtgaagctctgctcgacagtaaaatggaagctgtaatgtattgagtacataaagtttgtagatcactagccataccatcgtagtacattttgttttccatctcttacaactgcgcgctttccctgcttttagattgttgaggagtacaatgatctcgtcacgtctcagcttgaaaaacaaagaaatgtaagtttaaatgcattgtgctttatttcgtttgtctagttgatgtttctttatcacctaggtaacgcttttatcacttgctgctggtatctactcccactgtcccacaaaaaagtccaatcccggggatgaatctggactcgtccctaggattggactttttgggggacaaagggagtatgttccaaggaattattggtgtcagatcattaacatggaatatttggccatgtaagttttggttttagtactaatgtacattctgattttggtgctaatgtagtattacgaatcactcctgctagaagtcaaagaggataatgagaaagaaattgctgctgctaccgagaaagcagtgggcataaaagtacaaaagttacaagcaaagcttgataagtgcatggaagagaccgggtttcttaatgatgtaagctcttgcctatttgttaagatcaaatctgaaactgtagctctagaattactgccttcagggaactttatgacttacgtactcataattattttgatatattttagattcatgaaaatcttgtaaaaaacatggagatgtggagggagagaattcaaaaagtaaaagaaaggtattttctctgatatctttcaaattatcacaggaacgacttatgaatcaattcttgtttacaatcatgtcctattccagctaggtaacttagtagaatatgcatatgttttcattgcctctcatatgctgtaacgagtgaccaaagtggatatttggtcattttataattcccttgcagttgttgaaattggacagaaattgcgttaatttagaatttgagttgatctcaatttatagtttctgttttactgatgatcaaaaatcggtttgattttattatagggaacaagctgccattagattgaaagatgaaaaaattgagaagctggaggaggaggtcagtatgtttcgtaactgttgttttttagcaagttttatgcttctcttctcatgatattgcgtgccttttatctcggataagtcggatatgtaactgatgttaccacatgttagcaactcagaacctccagcgtgcagagttgttccttagtgctgtcttgtttagacttgttagtggatatcacacttgcttgataagaccgtactataatcaaatagtttagtcccttgtttgcataaagtttaagttatgttatgcacataacataagtgaatcccctgtagcattgtatctcatgatcacgaggtaccttttgtgttgcaaatagatgctgtctgacatctccaaagaacaaaaaagagaaagctatgcattggtctttggtcacgttgtttatgattgcaatcttctgcataatgtttacagtatgcatagttttaccattgtcttattagaaggcttattactgacccatcatcctcttgtgacagctaagggatttgatagcccattttgagcgccaaaataccgtggcagaagcttcagagtcaatgtcaagcgatataaacggtagcacaattctctcggtaccatctgaatcatctgcaagcagcaacagcagcatcagaaattaggattgagatttgttaccgtaagctgtatttcagcatcagaaattagtctgttactggccttaccgtacattctttgctcccttattatctaataatgacagttatgtgttaccatggtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0182900, RefSeq:Os02g0182900