Os02g0184400

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Revision as of 02:16, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0184400| Description = Similar to Sucrose-phosphate synthase 9 (EC 2.4.1.14)| Version = NM_001052643.2 GI:297598708 GeneID:4328527| Length ...")
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Gene Name

Os02g0184400

Description

Similar to Sucrose-phosphate synthase 9 (EC 2.4.1.14)

Version

NM_001052643.2 GI:297598708 GeneID:4328527

Length

7788 bp

Definition

Oryza sativa Japonica Group Os02g0184400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4708490..4716277

Sequence Coding Region

4708504..4708836,4708975..4709064,4710124..4710332,4711251..4711314,4711793..4712491
,4712657..4712764,4712920..4713051,4713183..4713359,4713920..4713973
,4714072..4714134,4714227..4714928,4715048..4715175,4715563..4715839

Expression

GEO Profiles:Os02g0184400

Genome Context

<gbrowseImage1> name=NC_008395:4708490..4716277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4708490..4716277 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcttcgccatttctccgcacttgctccttctcctctccttttcctcctcttccttcccttcccttggcttcgcctccactcctccgctcactcctctccccctccacgatctcgccgggatctccacggcggcggcggcggcatggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaaggcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccggcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagacatggctccgcgcgaacgcgatgcggagcccgcaggagaggaacacgcggctggagaacatgacgtggaggatctggaacctcgcgaggaagaagaaggagttcgagaaagaagaagcctgtcgtctgttgaaacgccaaccagaagctgagaaattacgaactgatactaatgcagatatgtctgaagatctatttgaaggagaaaagggagaagatgctggtgatccctcagttgcgtatggtgacagcaccacagggagctcacctaagacgagttcaattgacaagctatacatagtactgataagcctacatggtctggtccgtggtgagaacatggagctaggacgagattcagatactggtggccaggtcaaatatgtggttgaacttgctaaagcgttgagttcatctcctggagtttacagggttgatttgctgacaagacaaatcttggcaccaaatttcgatcgtagttatggtgaacctacagaaatgttggtttcaacaagctttaaaaattctaaacaggaaaagggtgagaacagtggtgcatacatcattcggataccatttggaccaaaagacaaatacctagctaaagaacatctatggcctttcattcaagaatttgttgatggtgcacttggccatatcgtgcggatgtcaaaaaccattggtgaagaaattggctgtgggcatccagtatggcctgctgtgattcatggacactatgccagtgcaggaatagctgctgctctgttgtctgggtctcttaatattcctatggcatttacaggccattttcttggtaaggacaaattggaagggcttctcaagcaagggcgacattcaagggaacaaataaatatgacatacaaaataatgtgccgaattgaggcagaggaattatctcttgatgcatctgaaattgttattgctagcactagacaggagatagaagagcagtggaacttgtatgatggttttgaggttatacttgcaaggaagcttcgggcaagagttaagcgtggtgctaactgctatggccgttatatgcctcgtatggttataatacctcctggtgttgaatttggtcatatcattcacgattttgaaatggatggtgaagaagaaaatccatgtccagcctctgaggacccacccatttggtctcagataatgcgcttctttacaaatcctaggaagcctatgattctggctgttgctcgtccatatcctgaaaagaatattacatcacttgtaaaggcatttggtgaatgtcgccctctaagggagctagcaaatctgacactgataatgggtaaccgtgaggccatttctaagatgaacaacatgagtgctgctgtcttgacctcagtgcttacattgattgatgaatatgacttgtatggtcaagtggcttatcccaagcatcataagcactctgaagttccagacatttatcgtttagctgccaggacaaagggtgcttttgtgaatgtggcttattttgaacaatttggtgttaccctaatagaggctgctatgaatggtttgcctattattgcaacaaaaaatggagctcctgtagaaattaatcaggtgctgaacaatggtctccttgttgatccacatgatcagaatgccattgcagatgcactgtataagcttctttctgacaaacaactttggtcgagatgtagagagaatgggctaaaaaatattcaccagttctcatggcctgaacattgcaagaattacttgtcaaggatattgacacttggtccgagatcacctgctattggtggcaaacaggaacagaaggcacccatatcaggaaggaagcatatcattgttatatctgtagactctgttaacaaggaagatctagtccggataatcagaaacactattgaagtcacacgcacagaaaaaatgtctggttcaactggttttgtgctgtcaacttcacttacaatatcagagatacgctcgctgctagtgtctgcaggcatgttgcctactgtttttgatgctttcatctgcaatagtggaagtaatatctattatcctttgtattcgggagatacgccaagcagttcccaggttactcctgcaatagatcaaaatcaccaagcacatattgagtatcgatggggaggagaaggcctaagaaagtatctagtgaaatgggctacttcagtggtagaaagaaagggaagaatcgaaagacaaattatttttgaagaccctgaacactcttcaacctattgtcttgcatttagagtggtcaatccaaatcatctaccccctttaaaggagttgaggaaattgatgagaatccaatcactccgttgcaatgccttgtataaccacagtgccaccagactctctgtagttcccattcacgcatcacgttcccaggcactaaggtacttgtgtatacgctggggaatagagctgccaaatgttgcagtccttgttggtgaaagtggcgattcggattatgaagaactgctaggtggtctccacaggaccgtcatcctgaagggcgagttcaacatccccgcgaacagaatccatactgtcaggagatatccgttacaagatgtcgtcgccctggacagctcaaatatcattggcattgagggttacagtacagatgacatgaagtcagctctgcagcagattggtgtgctgacacaataa</cdnaseq>

Protein Sequence

<aaseq>MLRHFSALAPSPLLFLLFLPFPWLRLHSSAHSSPPPRSRRDLHG GGGGMAGNDNWINSYLDAILDAGKAAIGGDRPSLLLRERGHFSPARYFVEEVITGYDE TDLYKTWLRANAMRSPQERNTRLENMTWRIWNLARKKKEFEKEEACRLLKRQPEAEKL RTDTNADMSEDLFEGEKGEDAGDPSVAYGDSTTGSSPKTSSIDKLYIVLISLHGLVRG ENMELGRDSDTGGQVKYVVELAKALSSSPGVYRVDLLTRQILAPNFDRSYGEPTEMLV STSFKNSKQEKGENSGAYIIRIPFGPKDKYLAKEHLWPFIQEFVDGALGHIVRMSKTI GEEIGCGHPVWPAVIHGHYASAGIAAALLSGSLNIPMAFTGHFLGKDKLEGLLKQGRH SREQINMTYKIMCRIEAEELSLDASEIVIASTRQEIEEQWNLYDGFEVILARKLRARV KRGANCYGRYMPRMVIIPPGVEFGHIIHDFEMDGEEENPCPASEDPPIWSQIMRFFTN PRKPMILAVARPYPEKNITSLVKAFGECRPLRELANLTLIMGNREAISKMNNMSAAVL TSVLTLIDEYDLYGQVAYPKHHKHSEVPDIYRLAARTKGAFVNVAYFEQFGVTLIEAA MNGLPIIATKNGAPVEINQVLNNGLLVDPHDQNAIADALYKLLSDKQLWSRCRENGLK NIHQFSWPEHCKNYLSRILTLGPRSPAIGGKQEQKAPISGRKHIIVISVDSVNKEDLV RIIRNTIEVTRTEKMSGSTGFVLSTSLTISEIRSLLVSAGMLPTVFDAFICNSGSNIY YPLYSGDTPSSSQVTPAIDQNHQAHIEYRWGGEGLRKYLVKWATSVVERKGRIERQII FEDPEHSSTYCLAFRVVNPNHLPPLKELRKLMRIQSLRCNALYNHSATRLSVVPIHAS RSQALRYLCIRWGIELPNVAVLVGESGDSDYEELLGGLHRTVILKGEFNIPANRIHTV RRYPLQDVVALDSSNIIGIEGYSTDDMKSALQQIGVLTQ</aaseq>

Gene Sequence

<dnaseqindica>15..347#486..575#1635..1843#2762..2825#3304..4002#4168..4275#4431..4562#4694..4870#5431..5484#5583..5645#5738..6439#6559..6686#7074..7350#attttttaattattatgcttcgccatttctccgcacttgctccttctcctctccttttcctcctcttccttcccttcccttggcttcgcctccactcctccgctcactcctctccccctccacgatctcgccgggatctccacggcggcggcggcggcatggcgggcaacgacaactggataaacagttacctcgacgccatcctcgacgccggcaaggcggcaatcggcggcgaccgcccctcgctcctcctccgggagcgcggccacttctccccggcgcgctacttcgtcgaggaggtcatcaccgggtacgacgagaccgacctctacaagacatggctccgcgtgcgtggctcccccctccctccctccctccctccccccacctctaattccgcttccgcgctctcctccccgttgggtttgtttgattgatcgatcgatcggtggatcgatctgtgtgcgtgtgcgtgtgcggcgcaggcgaacgcgatgcggagcccgcaggagaggaacacgcggctggagaacatgacgtggaggatctggaacctcgcgaggaagaagaaggaggtgagctcttcgctccgttcccttcgatgatgatgatgatgatgatgatgatgatagtgtgcgtaggttgcagagagctcagccagtgactcggtgtaattttgattctaatggatgaattgataaagtgtggcgtatgtgatagttacttgcttagatggtgctggatctgttcagaggggataattaacaaagctcttggtttatttaggaaggatgctttgcctgcttggcattgctttattacagagagttgtttcgtcatctatgataagacttttagaagacattgagccgagttactgaacaaatgcgggcagcacgcagagaatgctggattgctttgttgcttctattgcttcagttgtttagaatactcttgtgaccgctatgtcattacactacaattgataagcctttatgtgtttgttccattttgacccctaacgttctaggtagaatgtgaatgaagtcatttgttttgctgcatcttttgtttgaggtattacgatagagagtatctcttgctactgtttatgtcatcgtgcctcgtgctacaatcttagaagctttaaattttgtcatattgctaagtacaatgtgagtgcctgaattgtatcacttggtaattcatacatatgaaagcaaaggctgcaaacaaatgtaatatatgaatagcaactcgacctgatggtacatgcctggcacaatataacgcatcctgttccatcatccattttgtctatttcttaagctcttagctctgcctggctattactttgtcctcatgacgcaacgtatcctgttttggctagtccatctgttttggaagtacttttgcatggaagtcttagtcaacccttggtttcccagttcaatgaatgtttcatttttattcttttcagcatctacctacctttcgtgttgtaatataattggctataccaacatgtacaaatattcttgcctgaaagactgatgttggagttgtacctattctgtaccattgtattttgtccttcgcttgtcatatacatgttcagatgttcttacatgcagttcgagaaagaagaagcctgtcgtctgttgaaacgccaaccagaagctgagaaattacgaactgatactaatgcagatatgtctgaagatctatttgaaggagaaaagggagaagatgctggtgatccctcagttgcgtatggtgacagcaccacagggagctcacctaagacgagttcaattgacaagctatacatagtactgataaggtacaaagtattattttaagtaaccctttttttttaccatttgtgaatcattcagcataacatcaggacgaaaaattcaatttaatcaaactactttagtcaaatttcttaaggtaatagtagtagctgctatctgtgtcgatttttctttcttttttattaggaacttctccatacttcctgagtaaactgcagccgagttcctcatcattctgtactataagaataattcaaagaaaatccgacaaatgaagcagtaatttcaaataacgagatggcagtattcttgtttatcatgacatttatttggccatgtccatgacactgaagaactctctcctgttctgggcttctaggcacatgaaaagaaacgaagtccaaagcattatctagctttgatgccctgattctgtagatttccttgattccttctagtccaagtgtaatgctcgtgcattttgcattcctctgtctatttaggtattcacaagcttgaagtggtatacaatgaatactggctctagtaggatgacctcattatcattttgcgcactttgcatgcctttttaggaaagagtggatcgacgctgctattttagcatgcattttgtttctgcatctgattctgttgcagagtttatattatattatatatttatgtgtctatttccttagcttttgggcagtctgttgctactgttgaaagaacaagagccacaacttagaattgacaagatataaatgtatcacatgtttaacaaacaatcatacatcttttgaacagcttcataatgggcagccgaccaaaattttccatgttgattttataatccatgctcacgtggaaacggtgtctgttactctatccttgaagccaatttgtaatgttcattaatcagttcatgcttcgtactgcagcctacatggtctggtccgtggtgagaacatggagctaggacgagattcagatactggtggccaggtaatgctgctactatatcatgattgtgcacatgggatcccaatctctggcaacacaaatttatttatgactatatcatactgggactacaaatactattatgtatactgacattctaatattttcaactcaaaatttacttgagtgtattttaatttgaatccttttatgtttaggatgcagtcttaaattttgagttaggttctaatatccaatggttgttatggcccactggacatttttttttgtggggggtcagggtgggggtaggggtagatgttcttttcctttttggtggtaatttctagtacttttacactttttcctgagaaaactaaggccttttgcattatctgttagtgtatgacagatttacagaccttttctctatttccatttctagtttatctactgagatttttctcatagcagaagttccaacaagttcttaaatatatattcacataccattttgtaggtcaaatatgtggttgaacttgctaaagcgttgagttcatctcctggagtttacagggttgatttgctgacaagacaaatcttggcaccaaatttcgatcgtagttatggtgaacctacagaaatgttggtttcaacaagctttaaaaattctaaacaggaaaagggtgagaacagtggtgcatacatcattcggataccatttggaccaaaagacaaatacctagctaaagaacatctatggcctttcattcaagaatttgttgatggtgcacttggccatatcgtgcggatgtcaaaaaccattggtgaagaaattggctgtgggcatccagtatggcctgctgtgattcatggacactatgccagtgcaggaatagctgctgctctgttgtctgggtctcttaatattcctatggcatttacaggccattttcttggtaaggacaaattggaagggcttctcaagcaagggcgacattcaagggaacaaataaatatgacatacaaaataatgtgccgaattgaggcagaggaattatctcttgatgcatctgaaattgttattgctagcactagacaggagatagaagagcagtggaacttgtatgatggttttgaggttatacttgcaaggaagcttcgggcaagagttaagcgtggtgctaactgctatggccgttatatgcctcgtatggttgtgagtatacacattttcctccccttgcacaacaatttctaaattattgggaaagtatatgttacaccttagggcttttggcattagcaccagctgcctagctgtagttgcaagcatcgtcaataacccctaatgtttattgctttcctattcctgatttttcagataatacctcctggtgttgaatttggtcatatcattcacgattttgaaatggatggtgaagaagaaaatccatgtccagcctctgaggacccacccatttggtctcaggtcactgcacttcctttagaatcctacagagatctcagttactagtataacctttattcagtatttcttgtcttattgaggatagtttgttctgcctgttaaacctgtacctgagtttgatcactgataatctgtacatgtgcaactgatgacagataatgcgcttctttacaaatcctaggaagcctatgattctggctgttgctcgtccatatcctgaaaagaatattacatcacttgtaaaggcatttggtgaatgtcgccctctaagggagctagcaaatctggtaagattggacttaaaccatctcgatgttctgtggtttggttctctgtaatgtcataatcatattgtatagtgtacaaaatgatatatatttcctagactattaggtgctaattttattatgcattgcagacactgataatgggtaaccgtgaggccatttctaagatgaacaacatgagtgctgctgtcttgacctcagtgcttacattgattgatgaatatgacttgtatggtcaagtggcttatcccaagcatcataagcactctgaagttccagacatttatcgtttagctgccaggacaaaggtatgctattcctgaaataaagcaaagaaacttttctatgttttagtttttttatgctgcttttatgttctgtaagtgttcttggttgaaatctaccattcaatgtactccctccattccaccttttaccacaatgtgtgccttgcccattgaagaaattgagattgcaagatttccacactccagctctatttgattcagtaaaaaagtggataattggctgtagatagcatttaaaagggggtacatatggtcattttacattagctttttttaaatagatttagtccctccttggtctgtggcgcaactttgaatggacagatattgtgaaatggggtgggctcttgtttcttctttttttctcctacgtcgctttgcagaagaaccccatgttgcaatttttttaagcaatgtttttgctgaaacaaagattgttttcttgatttttaaaactgaagtatctttttttttcttatggtataataggcagaaggcatcagtaccttatgttcctttcccacttactttggtgttgatcatctgttgatcttctgcagggtgcttttgtgaatgtggcttattttgaacaatttggtgttaccctaatagaggtcagaactttgagagctcaacttgccttttccagctgttcaactttttcagtgtcctaaactccaaatcataaccagtttattatatctatatgcaggctgctatgaatggtttgcctattattgcaacaaaaaatggagctcctgtagaaattaatcaggtgtgtatatgttctaccatgttatatgtcaaaaatacaacaacgcactgaaggggtaaatcactttactttcttgtggatgtttcatgcaggtgctgaacaatggtctccttgttgatccacatgatcagaatgccattgcagatgcactgtataagcttctttctgacaaacaactttggtcgagatgtagagagaatgggctaaaaaatattcaccagttctcatggcctgaacattgcaagaattacttgtcaaggatattgacacttggtccgagatcacctgctattggtggcaaacaggaacagaaggcacccatatcaggaaggaagcatatcattgttatatctgtagactctgttaacaaggaagatctagtccggataatcagaaacactattgaagtcacacgcacagaaaaaatgtctggttcaactggttttgtgctgtcaacttcacttacaatatcagagatacgctcgctgctagtgtctgcaggcatgttgcctactgtttttgatgctttcatctgcaatagtggaagtaatatctattatcctttgtattcgggagatacgccaagcagttcccaggttactcctgcaatagatcaaaatcaccaagcacatattgagtatcgatggggaggagaaggcctaagaaagtatctagtgaaatgggctacttcagtggtagaaagaaagggaagaatcgaaagacaaattatttttgaagaccctgaacactcttcaacctattgtcttgcatttagagtggtcaatccaaatcatgtgagccttccaaccacacactgacacacagatttatcgtgtgtgatgtgtgctattaatgtttaatgtttttttagacgttcccttttgaatgtttaatgtggtttttttcattgtagctaccccctttaaaggagttgaggaaattgatgagaatccaatcactccgttgcaatgccttgtataaccacagtgccaccagactctctgtagttcccattcacgcatcacgttcccaggcactaaggtttggcatcttcttttgcatttttctttccttcatttataccaactcaccatagaagtatttttccattttgtgttgcctaacttcaataaacagtgaattttgaagttttaagtaaaaaactgtctgtagttccatactattttgcttcaaacagagataataacaaaatgtgcaatatgattccttttcaaactcatgccagctttaatattcgctaaaatgaacgatgatgtgaacaaattatcattgtttacaacacagtagaaggatgcttgctgtaattcttgtgtgtcattgtgctgtgcacctaaccatttgcacttgctcagaaatgaagttttatcttgttacccgttgtgctgaccaaacctaatgttcatttaggtacttgtgtatacgctggggaatagagctgccaaatgttgcagtccttgttggtgaaagtggcgattcggattatgaagaactgctaggtggtctccacaggaccgtcatcctgaagggcgagttcaacatccccgcgaacagaatccatactgtcaggagatatccgttacaagatgtcgtcgccctggacagctcaaatatcattggcattgagggttacagtacagatgacatgaagtcagctctgcagcagattggtgtgctgacacaataacaccttctagcttgcataccacacaaagaaaacgaaaagggaaagtaaagaaccaaaccaagaaccactatttccatacttgatggaaatgccgattttgttttgtaggatgcagagtttgtgtgtgtgttccattcctgagctgtgaataactctccctccttttgtttgtgctaagttcttttttgaagtgaaccatgtggatacatcaaaaaccagacacaaagatggtttaaacatccatgattacgggaaaaaaaaccatacataaagaatagaatggttcagagcgagagagctctaaaatgcaagaaggccaacttaattacatggatggagggagacagacctctcgagagtgtgtgctcaatacgattttgttgtgttcaatgtaatccaatgttcattatggtcttatatctttatacatttcccttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0184400, RefSeq:Os02g0184400