Os02g0189900

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Revision as of 02:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0189900| Description = Hepatocellular carcinoma-associated antigen 59 family protein| Version = NM_001052681.1 GI:115444732 GeneID:4328567| ...")
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Gene Name

Os02g0189900

Description

Hepatocellular carcinoma-associated antigen 59 family protein

Version

NM_001052681.1 GI:115444732 GeneID:4328567

Length

9600 bp

Definition

Oryza sativa Japonica Group Os02g0189900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4974451..4984050

Sequence Coding Region

4974587..4974610,4975355..4975425,4981804..4981856,4982603..4982772

Expression

GEO Profiles:Os02g0189900

Genome Context

<gbrowseImage1> name=NC_008395:4974451..4984050 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4974451..4984050 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagtggcggaccacctcaaggttaggaagaattcggaagagagctcaacgcagtggaccaccggcattgctgaagttcagccgcctattaagtctgctggagagaaactatgctgcagccgcaacgaagaaggcacaccgcaagccctgaggcagctgggagatgaagctgtgtgcgttggccgccttggcggcggcgatcacctcctccgctgtggcgtcctccttcccgaacaggatgttctcccggatgctggtggcgaacagcgccggctcctggctcaccagccccatctgcgctcgcagccactttag</cdnaseq>

Protein Sequence

<aaseq>MAVADHLKVRKNSEESSTQWTTGIAEVQPPIKSAGEKLCCSRNE EGTPQALRQLGDEAVCVGRLGGGDHLLRCGVLLPEQDVLPDAGGEQRRLLAHQPHLRS QPL</aaseq>

Gene Sequence

<dnaseqindica>137..160#905..975#7354..7406#8153..8322#tgatgctggaattgaatcgagcgtgcgcgcatgcgtgggtttgatctctgaaggaacgagttgttgacgaagagggggcaatgagatcgatgtgaaagacaaggaggaaaaacaccatgtcgatgagctctacactatggcagtggcggaccacctcaaggtttgtagccgagtagagcttcaatcaggggcggagccaggattttgaggcaccggggtcacattagctagcctaagctactgccatatttgatagggctctaattctaggatcaattttttaggctacatatttttagatccaaaagtttttggaaataaattaatggtggattgaggtaatttcggtgggatatcattgttttagacttatttagactataaactctaaagtaggcaataatttatgagctaaaaccatataaaattgacgaactatgcctaattattttggcaaaaacgttcttaaagttgtttattaacttaaaaaggactaatttgtactactacttgagtagaattactagctagcctaatttcatgtataaacacactacatagctaaaaatagctaatctgttaagtgctcaaacatgctatgggtaagctgtgcgatggtggtgagcagttctcacactagcctgtaactattatgcattgctagtagcgtttagtctgtgaaccgctgcagttcaatgggccagggtcaacaagcatcggctaatggggtcactgcttgcaatatacgaaggaacatactggttggtcagatatcgtcggtgtcatctgaccccagtgatacaacgtagctccgcccctggcttcaatgtactcttgtaaggctagatttttaatggttttaacgtgttgtacattgtacgtgccaatatatttttgcttataggttaggaagaattcggaagagagctcaacgcagtggaccaccggcattgctgaagttcagccgcctattaagtaagttcacgtgtcccttcttttgttcatgtttattaaaataagtttacactgccttgtaccatcgatgtgtcccttcttttgttcatgtttattaaaataagtctgccttgtaccatcgtatacgcagatcatcacccaaaagtatgttcaaaactgcactagcgtgaatcagctagttgcggcattctctaggaatatttctgtccgtagtttcatatgaaaccactggttgttttacagcaagatgttggtagttgttatatgaaattatcgccattaggtttaaggcagattggagaattggcattagttagtaaattagaacccctttatttcatatgattattcgtactccttagtttcaggttttgatatggggacatgggtatactggacatcccccccaccccccccccccaaaaaaaaaaaaaaaattctccttacccgttgaacagcatatctaagttacaacaaggaggttttctattttgttcatggcccactacgttcttttaaaaaaaaacgtgtgaactggaaacagttgcctaaataataaacacatatttgaaaaccaagaatgttgaatttcacattttgcaatacctgtgtgaaaattacaagccaattgtaggtaacattgatatttctgatccaatctttttgcattgtgatgctattactccttgattgtaaggagcatcattctgcacttaaaacttaaccttacatcttctaaagcccatttgggatccacgtgggatgtagaggctgtattgatgtccattatctaaaaaatattctgaaagcccataagggcaataattctttcaatatataatacctttttcaacatagtgtcttctgcctatgatacattgatcatgatgttgcattgttactacttactagtctctgtggtactgtgttcaatagctatagtagttttcaataaatatggaacaaaagaacaaagaaacacaacctaatatacaacatatctcatatttttttgatcttctcatcattacagtaaaatttcagcagataattcaagaaagaaaacttgcaagcttcatacacctctatatacagatagagcaatgggagagaaaaaaaaatcccagtttcataaaattttaaatgataaggagcatccttgcttgcagttctaatgactgattgaaccgggtgtgaatttggaaatgggtgctgtattgttgtgcaaaatctcactgctggacctgctggttgcctctttgtttcatactaaccaagctaaaatatgttccagaggggcctttggccatgagggatgcgtgtgtgcccttctccacaactatccctttttcgagcacagtgataaggtcacaattttgtatagtgctcagcctgtgtgccaccaccacacttgttctgtcaatcatcactcgatctagtgcctcttgtaccactttctcggactggctatctagtgcacttgtagcctcatccagaagcaggatagctgggttcttcagtatggcacgggcaattgcaatgcgctgtttctgtcctcctgatagctgaactcctctctcaccacaccacgtaccatatccatccttcaggttgctaataaagtcatgtgcattagcagatcttgctgcatcctcaatttccgcctcactagccgtttctgtgccatacacaatgttttctctgattgtacctgcaaatagtgttggctcttggctgaccaatccaatgtgccgccgcagcgctcgaggattatatgctttgatatcccttccatctatcttcaccgaccccctaattgggtcgtagaacctctctatgagcccaatgatggttgacttgccagagccactttgcccaaccagggctgttgacttgcctggttggatgctcaatgtgaaccctttgaagattataacatctggccttgatgggtatgcgaaatcgactcttctgatgtccacctcgcctttgagcttctctggcttgtatccctgagggttgtcaggatcaatttctgtttcccggtcaagaacagcaaatactgaagcaactgcatctgcacccttagctaggtctgttgtcatgcttcctgcctctgcaattacacgacctgtgcttgctagaataatgaaggtttggaagatctccttggcagtaatttggtgctcagccataagcctgccactataccaaaagccaatggtccatgagcatgccataaggctcatggcggtgccgaggccgagccctgcaaaccatgattgccggatactttccttgcgtggtccatcttgtgattggtcaaaaaggcgtaagatacgctcttgggatgagaaggctgtaattgtacgaagattggagactgcctcagcagctagcttgctactttcagcttgtgcatgtattgatttcttggacatgctcttgagtaagacacggcgagcataaaagcaaacaatgatcagaggctgcactgctatcataacaagggccaaacgccaggcaatgaccagacccatggtgcatgcaataagcactgctgaaatagtctggatcaccagagccattcgatcacccacgagagacctcacctacaataacaacaaaagtatgtcaggccagtcacaattccattttaattatctacaattctacatacttattttgatgtatgcacttacaacgttggcgtccttagctagctgtgagcatatggcaccactggagttctcgtcacggtcaaaccacccaatttcgaaagtgaggatctttgcaagcatctgttcccttattctcttggtgaggtattcccccattgcaccaaagttgtaatgctgaccaatatttatcaaaaatgagagcactgctagacctacgaaaatgagtgcgtaggtccttgttttgtccttgatctccgcatgatctgtcaagaagtagactgagatcatgcttcccatggcatatgcaaatgctggctggatgcctccaaacacaactgcaccaaaactccctattagtgcttgcttccactctggtgcattaagcataagtagccttctgaaggatggcactggaagctttggcttctcagtgttgtcagcatctcttgcatcgcccaatgaccttactgagcttgacctgctagctgcagagaacctcctgctcatgctgtggctgctggactgccctagagcggatgtactaccaattacaccaatctcatcaatctcatttgaatctctggtctgttgaaggcgcacaagagatgaatagaggccattctcattggcaatgagctcatcatgcgatcccagctccttaacctcaccagactgcatgacagcaattatgtcagcattgcggatagtggataggcgatgtgcaatcacaatagtagtccgccccatagatgctaggtcaagggcctcctgtacaacgctctctgactcagtgtccaatgcactagtggcttcatcaaggaggaggatcttgggtgacttcaggattgctctcgcaatagcaattctctgcttctgccccccagacatttggacaccacgctcgcccacctgttgtttttatttcaaactaggttattactacctccgtcccaaattatagctatttttggctacaaatctggtcacgcggttgtttagattcatagctagtaatgcttatattttgggatggagggagtactaggataggattactgatatgataaacatgtttgaaatgcataacagtatgtgcaaatattggcatgaatatgttcttaaaaagaacatgaatactcagttgcaagtcctatagacattatgaaagcatcattatgccaaggatattgttatcttgtatcaggagtgacatcagtttcttttttcatggaaaaattttggctgatcatttgattgttagaagtgaacattcttacccattagtactaatcacaacaaacaagcataatcactaactgatgactgatggaagtgagcttcatcaactgtgagatggtgtatgtctcctgtctgtttcatgaagatttctaaaatctgtgtgcagcatttataaatacttagcctgatttcatgaacactgcgttgaaatcatacccttatttgtaataataccttgttcccttgcccacatcaaacgcctggttttacaactgattgaaactgtttggcttaggcccagttctttttctcaactacaaacttcaactttctcgttttctgttagcacgcatttcaaacggttaaatggtgtgtttttagcaaaaagtttctgtgtaaaagttgtttttttaaaaaatcaaataaatccatttttcaattttataatagttaatgaatcatgtgttaatgagttttatcgtttcgcgagcgctgaaaatatccctccaactgggagagaacgaacagagccttggtgttaaacaatagccaccattgctttagcggatggataggcacatcaggttatcttgattgcttagtaaagtttttcggtggttatacagttatgcttgccgtattttaaacacttcaactagtattttgcagtactgaaatggaccatctttctttcagatttatcttctaggaaacaagttatgttccctggcgataaaaaaatagtcaagtggcataacttctatacaaatagaagcatgcaaggtaatgattatcaagtatcaacatcaaaaagccttctccgtatttgtatgagtgagtatgaaaggtctagtttggtcctctaatattagatctacaatacaacatgtgagtggatgattagtcagtacatgctctaggaaatcttgttgaactaatagtcgcaatatttatcattgaatactgtagatgcactaccagaatttagtatttgttattttgtagcactctttcctgtcatgttccaatgagtgcttgaacagtgaaaactaaagtaaagctatcaagtgcctgccattatttttgtgaaactcacagcattgcagatattaggtggcagatatctggcaaagaggatttttttttagtgctctgtcaagtcatcttgttaacaggtttgcccatatcaaaatctaatgttaagtgccccacagcaggtttgcaaaaagtagagattactagtgctggggtccaaccaggaataaacctttcctgtttcaaggtttacatgcatgccacttagtatccgtatcattacggtgatttttcattattagctaggggctgcatatcaaagaagtcaaggcagccaaaaaaaagatgtactcttttaccattataaggtttaggttcttttgagtgatttgcattggtagcgaaggaacaaatcaaaactaatattgtgcgaatcattttaattttccataggtgaaactgccttttggatgcattcatgccacatgcacacaggcaactttttctgtgaaggcctaccatattgctgtcacaatcgttggtgcctgatatataggtcctgggtgaaatcctgtttactgggaaagttggagcaccataaaattgttgattgggaacctcttttctgttttctagatttgcaaaaggcctctagctgcttacctgcagtgtccaccgaccatggaggcacacctaagtggtgggtggggaggaagatttcttatcccgaccaaaggaagggtctagcttcccttaagattgggggagtcccaacggtttcttgccttgctcgctcgtgctcatcgtgttttaaggttgctagttttgtttccgtggttaaggttgctagtagtgtgtttcttgttcttcagggtttagccccttttttcccaattaaccgtgcactgtgcggtttggcatcgtcctctccttaaaatgagaaaccttcttctttaatataatgctggtaaattcgccgtgatctttaaaaaaaaatgcactcatcgctctatgactcctatgtctcaccgtcaacaatttcctaaagcaggtgctttgaattttgataccgccatcactagaaatgaatctggatggcacggtctatatagcagccataggggtagttctgcaactgtatgctacatggaaatatggccatccacatcatgcaggctaagttgagtcatcatcatgttgggagtgagatcgagaaaccatgcattgcaattgagggtatgagtgtgggttgctatgttgtctatgttcacatgcagaaggagcagtaggtcccactacaaccgcagctagatgttaagggatatagttggttctacatccctaatttttttgcaagtcattcattcaatattgaaaatgatattatttctaatccaattgcaaatggatggtggactggcaggtctgctggagagaaactatgctgcagccgcaacgaagaaggcacaccgcaaggtaacaatttaggtatttctgtgatagtccagagttattttttgtattctctttttgttctgctatggctattcatgcaatgtagacgatcttatgatgttattgtgtgcgtagtaataagcctttagtttgtatgttttatttgttccgactttcaggactgctatagtcttttgtgcctgattggggatattttcactcttcaggtatctgtaatttttacttgtttactgaaaacatcttgtagtgaactccttgttccataaccctttcatttctcctagttcctgtttaggttgtgtcattaatcagatatgcttataccctaatagtcttggaataccttgataatttagagtgtttaaaagtacacttgacttggatcgtatatttgtatgcagtcctccctcatcctattcactgggacaggtagattatggatgcctaagctattttaaccatgtaaagcattttcaagctattgagcttttataactgattactgttttttgcactgtaatgtcataccgtaatagtgggtttcttgttattttaaggttaattttcgtttatttgtagtaatgataatagcgtaatctagtcgtgtcattatttttggtgacaaaaggcagacagctctctgaatctcagattgcatcagtgtgcctttttctgttaattttcttctcttgagcagtagagagagattgatgctaattctgagataatttacctgtgtgtcgtagccctgaggcagctgggagatgaagctgtgtgcgttggccgccttggcggcggcgatcacctcctccgctgtggcgtcctccttcccgaacaggatgttctcccggatgctggtggcgaacagcgccggctcctggctcaccagccccatctgcgctcgcagccactttagccggagcctccggatgtccacgccgtcgaccatcacctcgccggccgacgggtcgtagaaccgctccagcagcgcgatcaccgtcgacttgccggacccgctaccgccgaccagcgccacggtgcgccccgccggcacgcggaggttgaagctgacgaagatggggctctccggccgtgacgggtagcagaacttcacgttccggaactccacctcgccggcgacgttgcccagctcctcgccggtgtcgctctcggagtcgatcttgggcacccgccggatcacctccaggatcctctccgccgccgagctcgcctccgagaggtacttcacgttcgacaacactgacccaagcgctctgcaatcccatgcaagtaaggcacatcaatggcgtcgccgtcgccaagaattatacatagtgcaggatattacgtacaggccgccctggataacggcgtaggagacgacgaagacggtgccacccttgtagccatgggacatgacgaggcggcttccgtaccagacgttgaaggccaagatggcgaaggtgatgccgttgctaccgatggcgacgcccttggcaagcccttgcttgagccccagtcgcaccgactcctcgagtgccgctgagaactgagccatggtcgtccgctccgccacaaacgagtacaccgtgcgcaccgacgacatggcctgctcggcgatggcgccggggcgggtgtactgctccctgatccggcgagcgaggtcgacgacgacgcggccgtacatgaatgtcgggatgatgagaagcaccaccgacggcagcgccactagcatgagctgcctcatcagcgcgaacccaaatgcgtagttaccgacgaacatggcggcgttcatgacgaagttgggcaccttctcgctcagcacgtcctgcaccacgaggctgtcgttggccacgctggtgatcacctccgccgtcgaccccttcttcaggtcgaagtactccacgtcttgccggagcaccgcctgaaggtaccgtgcccgcatccgcgacgcctgccgctccgccgtccgtgtccagcaatacccctctgtttgtacaacacacacatcgccggcgggagtcagctcgcctcgccatcgccggcaggcattggaattcaacaggtgaccctatgctcacctagaaacgtcatgacccactgaccggcggccaagaagaggaggttcctcgcgttctgatgaaatggagatcaacacttcaattttcaaaggcaaatccaattcgatcatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0189900, RefSeq:Os02g0189900