Os02g0192200

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Revision as of 02:17, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0192200| Description = Octicosapeptide/Phox/Bem1p domain containing protein| Version = NM_001052697.1 GI:115444764 GeneID:4328583| Length =...")
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Gene Name

Os02g0192200

Description

Octicosapeptide/Phox/Bem1p domain containing protein

Version

NM_001052697.1 GI:115444764 GeneID:4328583

Length

4055 bp

Definition

Oryza sativa Japonica Group Os02g0192200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5121678..5125732

Sequence Coding Region

5123185..5123504,5123575..5125417

Expression

GEO Profiles:Os02g0192200

Genome Context

<gbrowseImage1> name=NC_008395:5121678..5125732 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5121678..5125732 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggagcaaacagatagtagctgttcttcaagtaggtggagaattcaaaactgatgatgatggacagatgtcctattctggtggagaggcgcacgcgatgcatgtgaaaagtgattggacttttaaaacattcaaacatgagatatcttcaacgctcaataacctcaaacttgactcctatgtgttcaagtacttccttccgaggaataacaagactttgatttcaatttccaatgacaaagacctaaaacgcatggttgaattccatgcagagtcagagacaacatatatttatgtcatgaagaaggctgacaacagggtaaaaacatctgccgtggtgcctgctgcttctgcagatcatgctgtagcagcaactactccagatggatctaagaggcaaaagatttgtgcaagttgggagaatgcgattactggagctggtcaagtgtttgaaggtccaaaggaattccgtgatgcactacacaagtatgccattgcacataggttccattacagatttgtcaagaatgactcttctcgtgtcactgtggaatgtaccgctgaaggatgtccatggcgtatacatgcatccaagtctcctgcaaagaaggatttcatgattaagaaagtttttggaagtcatacatgtgaatcagagtcagtcaaaagtcatcgtctagcgtctcaaaagtgggtggccagtgttattaaggaaaaattgcgtgatagtccaaactataggccaagagatattgctaatgatcttcagcgggaatatgggctaagcctgaattactcccaagcttggcgaggcaaatcaatagcccagaaagaactatacagttcacatgaagaggcatgcaaccagcttccttggttttgccaaaggattgtcgagacaaaccctggaagtgcggcaacagtagaggccttggaagattcaaaattccgcttctttgttgcatttcatgcctccattcaaggttttgtgcatggctgcagacctctcctctttcttgatgtgatatctgtgaaaccgaacaagcattggaagctgttggctgctacctcagttgatggtgaaggcgatatgttcccagttgcactctctgtagtggacgacgagagtcaagaaaattggcattggtttcttgaacagctaaaagcttcattgcctgtgtctggagaactaacattcatatcaaatggcaaatgtggtctgttggatgaggtctctcttatatttccagatagctatcatggctaccatgtcaactattttattgaagaatttaaggcacaattggatgacagttggagtgaagaactaaaagatacaatggttgagcatgttaagaaagccatgtattcatgcaaagttgatgaattcaaccagtgtattgaactcatcaaagttgaatctgataagcttgctgaatggcttttggagactaaacctgagaagtggtcagatgccttcttcaaggggtcgcgacttggccagtacacctgcaatgttcccgagacaattcttcagtgggtccccagtagatatgagctctcagtagtgcagttggttgatacaatcagatgcaacttgatggagatgatgtatacgcgcagggaatattcgaattcatggacggaaccgctaactccatcaaccaatcagaaaattcaggaagagatgggcaaagctcttacacacagtgttgtttgctcaacaggcaatgacggaaacaataatgtgtttgaggtatgcgatggcgctgtcaatgttgtcaacattgatacatgggactgcacctgcagaaagtggcatgtctctgggatcccatgctcacatgcaattgcggtgtttgagcgcactgatcataacccacttgacttctgtgccaagtatttcacaacagagtgctaccgcttgacctatgccatgtcaatcaatccaatacctgacattgttgtggctgctccatcaactgacccatcacaaggcgaggcattacatcaatcaccgattctaacccggaggcaggttggaagaccaaaggaaaagccagctgatcctcgaatcgcaatcaaaagggcggtgcgctgcagcaggtgtaagggttatgggcacaacaaggcaacctgcaaagtccctatcgcagcataa</cdnaseq>

Protein Sequence

<aaseq>MGSKQIVAVLQVGGEFKTDDDGQMSYSGGEAHAMHVKSDWTFKT FKHEISSTLNNLKLDSYVFKYFLPRNNKTLISISNDKDLKRMVEFHAESETTYIYVMK KADNRVKTSAVVPAASADHAVAATTPDGSKRQKICASWENAITGAGQVFEGPKEFRDA LHKYAIAHRFHYRFVKNDSSRVTVECTAEGCPWRIHASKSPAKKDFMIKKVFGSHTCE SESVKSHRLASQKWVASVIKEKLRDSPNYRPRDIANDLQREYGLSLNYSQAWRGKSIA QKELYSSHEEACNQLPWFCQRIVETNPGSAATVEALEDSKFRFFVAFHASIQGFVHGC RPLLFLDVISVKPNKHWKLLAATSVDGEGDMFPVALSVVDDESQENWHWFLEQLKASL PVSGELTFISNGKCGLLDEVSLIFPDSYHGYHVNYFIEEFKAQLDDSWSEELKDTMVE HVKKAMYSCKVDEFNQCIELIKVESDKLAEWLLETKPEKWSDAFFKGSRLGQYTCNVP ETILQWVPSRYELSVVQLVDTIRCNLMEMMYTRREYSNSWTEPLTPSTNQKIQEEMGK ALTHSVVCSTGNDGNNNVFEVCDGAVNVVNIDTWDCTCRKWHVSGIPCSHAIAVFERT DHNPLDFCAKYFTTECYRLTYAMSINPIPDIVVAAPSTDPSQGEALHQSPILTRRQVG RPKEKPADPRIAIKRAVRCSRCKGYGHNKATCKVPIAA</aaseq>

Gene Sequence

<dnaseqindica>1508..1827#1898..3740#ccctagccggcggcggcggctgcacgagcacgagcacaatccccgcgagctccaaaccctagcctagccgcacgcgcgcgcgcccgccgcgcgccacggtggccggcggcgctccgtccgccggtgctcgcgggctgggaggtgaggccgtgatttggggggtgttcctggcggcggcggcggcggcggcgtgggtggtgagggagcggaggcgcgactactgcatccccgactccggcaactgcagctgtggaagcttcaccgtggccggtaaaaattccgtgcgttcatatgtaaataaatataatggaatatcgaaaatatttgtggaaataattggggggcttcatttcgtgcgttcgtatgtaataaatataatggcttatcgaaagaatttgtggaaatagttggggggtttctttgcttttgatgaatgtttagacattgagctgttcgtgggtagaatttgtggattttgtgagggtttcccgtgatctttctgtcctgggggatggagaggagacgggattagggttggatcactgacgttttgggcgtaggtttgggatctgatgagtaatcatcatctcaccacggtggcgaaaagtgtgtccagaaactaatggatggtcatttctccagtttcaagttttccactttatgtgatatagatagaaccctcagttccatattcttcaatttaagcactgggaccttttgttttgagttatataactaaattaaactgttgggaggataaggggtaagaagaatattttctctaccaataataagctgttgtaagcaatgcagagaaaagtaagggagtgatgggcagattagagtttctgccaaagtccttcaagtcttatctaattgaaattaggtccaaaagttttgaaacctatatgtatggaggggatatgtaatagtaatatggaaattagggtatcctgtgcgttcccagcattccagtaccaaaagtacacttacataaatagtaaattgttgcacgcaaaattaatcatctgactgaacagagagtaatatatattttatggttatctacgattggctgtctaaaactcatttgcctgagtagttaagtggtagcttctttaaaaggattaggataccaggaaactcggtaaaaaaaatgttctgttattattttctgtctgtatctctgttaatatagtggtatagattatagtagtattattctagtgagactagataattcatgtgctggatgctgtttttatgtcctgccccatttgtttaaggatggcctgctgcttgtgtctctcaaaactctttaagtttttcactcggcaatatggtagcctgataatatcttgaacttgatgcactgcctttaactggtaaacaagtatcggctgcacaataagtactttcccatgtagattaacttgctgagcatacatccttaattctgcaaatcattaacactttcattgaacctcttcttaggaaagtgtaagtcatggggagcaaacagatagtagctgttcttcaagtaggtggagaattcaaaactgatgatgatggacagatgtcctattctggtggagaggcgcacgcgatgcatgtgaaaagtgattggacttttaaaacattcaaacatgagatatcttcaacgctcaataacctcaaacttgactcctatgtgttcaagtacttccttccgaggaataacaagactttgatttcaatttccaatgacaaagacctaaaacgcatggttgaattccatgcagagtcagagacaacatatatttatgtcatgaagaaggctgacaacaggtacccttctgactggcataaacatcttcataagtggatatccaaaaatgacatgagacatttttttcagggtaaaaacatctgccgtggtgcctgctgcttctgcagatcatgctgtagcagcaactactccagatggatctaagaggcaaaagatttgtgcaagttgggagaatgcgattactggagctggtcaagtgtttgaaggtccaaaggaattccgtgatgcactacacaagtatgccattgcacataggttccattacagatttgtcaagaatgactcttctcgtgtcactgtggaatgtaccgctgaaggatgtccatggcgtatacatgcatccaagtctcctgcaaagaaggatttcatgattaagaaagtttttggaagtcatacatgtgaatcagagtcagtcaaaagtcatcgtctagcgtctcaaaagtgggtggccagtgttattaaggaaaaattgcgtgatagtccaaactataggccaagagatattgctaatgatcttcagcgggaatatgggctaagcctgaattactcccaagcttggcgaggcaaatcaatagcccagaaagaactatacagttcacatgaagaggcatgcaaccagcttccttggttttgccaaaggattgtcgagacaaaccctggaagtgcggcaacagtagaggccttggaagattcaaaattccgcttctttgttgcatttcatgcctccattcaaggttttgtgcatggctgcagacctctcctctttcttgatgtgatatctgtgaaaccgaacaagcattggaagctgttggctgctacctcagttgatggtgaaggcgatatgttcccagttgcactctctgtagtggacgacgagagtcaagaaaattggcattggtttcttgaacagctaaaagcttcattgcctgtgtctggagaactaacattcatatcaaatggcaaatgtggtctgttggatgaggtctctcttatatttccagatagctatcatggctaccatgtcaactattttattgaagaatttaaggcacaattggatgacagttggagtgaagaactaaaagatacaatggttgagcatgttaagaaagccatgtattcatgcaaagttgatgaattcaaccagtgtattgaactcatcaaagttgaatctgataagcttgctgaatggcttttggagactaaacctgagaagtggtcagatgccttcttcaaggggtcgcgacttggccagtacacctgcaatgttcccgagacaattcttcagtgggtccccagtagatatgagctctcagtagtgcagttggttgatacaatcagatgcaacttgatggagatgatgtatacgcgcagggaatattcgaattcatggacggaaccgctaactccatcaaccaatcagaaaattcaggaagagatgggcaaagctcttacacacagtgttgtttgctcaacaggcaatgacggaaacaataatgtgtttgaggtatgcgatggcgctgtcaatgttgtcaacattgatacatgggactgcacctgcagaaagtggcatgtctctgggatcccatgctcacatgcaattgcggtgtttgagcgcactgatcataacccacttgacttctgtgccaagtatttcacaacagagtgctaccgcttgacctatgccatgtcaatcaatccaatacctgacattgttgtggctgctccatcaactgacccatcacaaggcgaggcattacatcaatcaccgattctaacccggaggcaggttggaagaccaaaggaaaagccagctgatcctcgaatcgcaatcaaaagggcggtgcgctgcagcaggtgtaagggttatgggcacaacaaggcaacctgcaaagtccctatcgcagcataaaacccttgccatatgttctcaagtgtaaattatgttgtgccttttgttgcccttttatgaactcgttctagtggaacctgtgcaatgccatcatgtatcttttatcagataacgtgtgaaacataatcttattcggtggttttagctccaagtatggtttgcctagcactagccggtacttttagattgaactttttgtggtgggcagaatctgggaaaaggattggagttttttgtacgttgttatccagcactcccttcctccatatggttgtaaattttgacatccgaagataagttattttatttctgttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0192200, RefSeq:Os02g0192200