Os02g0208600

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Revision as of 02:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0208600| Description = The stop codon is not identified.| Version = NM_001052795.1 GI:115444960 GeneID:4328690| Length = 5585 bp| Definiti...")
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Gene Name

Os02g0208600

Description

The stop codon is not identified.

Version

NM_001052795.1 GI:115444960 GeneID:4328690

Length

5585 bp

Definition

Oryza sativa Japonica Group Os02g0208600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6112116..6117700

Sequence Coding Region

6113331..6115441,6116559..6116679,6117088..6117147,6117254..6117700

Expression

GEO Profiles:Os02g0208600

Genome Context

<gbrowseImage1> name=NC_008395:6112116..6117700 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6112116..6117700 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagttgtcaaatcaagggcagacacccatgtcaactaacatgggttctcaaccattgccttcttcaaatattcaacctaatcaggctgagtatccgtctatgttttatccatctttgcctgctgactggggtgcacagccaatgttttctatgggagcttctgttccaattagttcgtattttattgttcctatgagtcaacaatcggtccaaattggtgcttctaggccagagactccgcgttcttcaggggcacattctctaagcagagtatcattgaggccaccccagcaagtgctaagtattcgaacatctttgccaacaatggttggatcacaacactctcctgctggcaagaaactgcaaccgacaattgcttctccaaaggttcaaatactgaaatctacacagtcacagtcatcgaacaaacgttctgcacagaaggagacaccatcaaaggttcaaactcagcaattggaatctgtgagatcaaagttcagggagtcactttctgctgctctgagaacagattctgatcagagtaagaatcaatcttctgatgtgcagcctgatgggtctgcagaccaaaagaaagagatggatgtagatgcagatcaagtggccaccacatcccaaggcatgagtgcagccaagtcggaagtattgacaagtgttggtgctgagaggcgtgctgaagatgagaagttaaacagtgatttagtttcgaacatagccacaccattaaacgcggacatccagcaacaaccagagaatgcttctttacaagatgaaatgttgggacaatatacagttgttgctgatgaactcttgcaaggtcatggactttgttgggtttctgactttgatgctggggttcctgaacctgccacacaacctaatttaaaaaggtccagggcttctgacattgaccctgttgttgcagacactctctcagaatctgagtccaaaagaatgaagtctgccaatgatgaggaagcgatagataaggatagcattattcagaaggcagatgatttagcagttagggttgaagaggagctgttcaaactatttggtggagttaataagaagtataaggagaaaggtagatctcttctatttaatctaaaagataaaagtaatcctgagttaagagagagggtattgtctggagatattacacctgatcgcctctgttcaatgactgcggaggaacttgcttccaaggagctatcggagtggcggttagctaaagctgaagaactagcacaaatggttgtccttcctagtaccgaggttgatgttagacgtttggttaggaaaacacacaaaggagaatttcaagttgaagtagaagaaacagatggtatctcagtggaggttgagcttggaggtaatcttcttactcaagttccatcaaaagcccctgaagatcagaccaaatcagacgataaagaaagtacagatgataaaacaggcatacaagacaatgacaaggcacctgatgggacttcacaagatgaagataatggggcaggcaagaacgatccacaagatgatttagaatatgttgataatgagaaaagtgaccttatgcaagaacttatggtggatgacttgaaagacactgaaaaccttccaccgatcccttcactagatgaattcatgcaaggtttagattctgaaccaccttttgaaaatctctcagctgggacgccagaagaagattcagatgatcgagacgaagctgacactactgcagaatctgcggaacttcctgaggaagaagttaaagtttctgcagcagagaagattgtatctgaagctgacctgccatcttcgcaggataaatctgagtccaagttagagtcacccaaagatgaggtgggttcaaatttgggccctgttgagcagcgtgaaggaaagctgataaaatcctccccagatagtgttgaagtcaaacaaacaactactgaaaatgtgctgaatcgtgactctactgtgcataatatggcaactactcttcctatgatacgtgaaagtatatgggagggtgcaattcaacttaccatgtcttcgctcacaaatgtcgttgccatcttcaaaagtggtgaaaagccaccagtaaaagaatggcggagctttgttgaaatcaaggggagagtcaaacttagtgcctttcaagagtttgttgaacagcttcccaaatctaggagccgtgctataatggtaactgagttgtgttggaaggaaggttctcatgagagtggtcgccaacatctcttgcagacaattgactcgtatatttcagatgaaagagtagggttagctgaacctgcagatggaatagagctgtacctgtgcccttctcaagggaaaactgtggagattctctctcggcacctgccaaaggagcatttggagagtcttgctgtgtcagcatcctccatcatcggggtcatcgtctggcggaggcccaacgttcccaggatgccggcacaccctaggcatgatggttcccggaggccgtcgattttaaagaaaccgcaggttactggttctactccaggccctaggccctccctgcctatgagctcgcacggcgcgccgccgggttttccagttcagcgtcaccgccacgaggaagatgtaactgatgatgtccctccgggctttggccctggtgttgctagggatgaagacgatcttcctgaatttaattttgttaactcgtcc</cdnaseq>

Protein Sequence

<aaseq>MELSNQGQTPMSTNMGSQPLPSSNIQPNQAEYPSMFYPSLPADW GAQPMFSMGASVPISSYFIVPMSQQSVQIGASRPETPRSSGAHSLSRVSLRPPQQVLS IRTSLPTMVGSQHSPAGKKLQPTIASPKVQILKSTQSQSSNKRSAQKETPSKVQTQQL ESVRSKFRESLSAALRTDSDQSKNQSSDVQPDGSADQKKEMDVDADQVATTSQGMSAA KSEVLTSVGAERRAEDEKLNSDLVSNIATPLNADIQQQPENASLQDEMLGQYTVVADE LLQGHGLCWVSDFDAGVPEPATQPNLKRSRASDIDPVVADTLSESESKRMKSANDEEA IDKDSIIQKADDLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPELRERVLSG DITPDRLCSMTAEELASKELSEWRLAKAEELAQMVVLPSTEVDVRRLVRKTHKGEFQV EVEETDGISVEVELGGNLLTQVPSKAPEDQTKSDDKESTDDKTGIQDNDKAPDGTSQD EDNGAGKNDPQDDLEYVDNEKSDLMQELMVDDLKDTENLPPIPSLDEFMQGLDSEPPF ENLSAGTPEEDSDDRDEADTTAESAELPEEEVKVSAAEKIVSEADLPSSQDKSESKLE SPKDEVGSNLGPVEQREGKLIKSSPDSVEVKQTTTENVLNRDSTVHNMATTLPMIRES IWEGAIQLTMSSLTNVVAIFKSGEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKSRS RAIMVTELCWKEGSHESGRQHLLQTIDSYISDERVGLAEPADGIELYLCPSQGKTVEI LSRHLPKEHLESLAVSASSIIGVIVWRRPNVPRMPAHPRHDGSRRPSILKKPQVTGST PGPRPSLPMSSHGAPPGFPVQRHRHEEDVTDDVPPGFGPGVARDEDDLPEFNFVNSS</aaseq>

Gene Sequence

<dnaseqindica>1216..3326#4444..4564#4973..5032#5139..5585#tcacccagtcatcacccacctcatccatccatccaccacgcagcagccgttcacctcaccacctcgcgcggcgacgagacgagacgaaccaaatggaaacccgaagcgcacaatccgtgacctctgcccctgcccatagctaaccctaaacccccaaatcgaatcccccaccttccccgcaaatctcccaacccccccccccccttccctctcgccgccgtcgccgtcgccgcccggcgcctaggtaaaagtggatccctcttccgccgggcgcttctgagctccagatgattcgtgcgatcgatgcgtgtagttcttttttttttttgtcggcgtgtttgcttcgtgattgccgcggctcggtgtgagcgagggatttgttcgttgggtttgagtgattgggatcgtcggatacgtggagggagacgtttagggtttggttgggttgggtctgcgctgccgggggggattcgtctacggagcgaggttatcgtcccttctctgggcgttgtgcccttttagatttgatgatgatggttgggtgttccttgatattggttcgatgtagacgaatgttatagctctagggtttgctttgttaagctgtattgagatctgttagtgttacttcattcacatgcctcctattttcactgctatcaccgcctggtgcatttcctagcaattgctaatcaaacgttaattcatttcttcactctaggtcaatgcgctgtggaggattatgttttactgtatgcgtatgaacagccatgttggcattttgttgtatcacgattgtattctggattgtttttctttttactgttagactattgttgtgttaatctagaactgattaatgcggacacctcttcagaatacttatcatgaatggaatctgtgtgcgtacttttctaataaattcaattttccaccataataatattcatactcatgtgggatgtatcatttttacatagggattgcttttttacgaaattctaattcaatattttttttaattcttaaatctatgtatactggcccagggagcatctattttgatgtcctccacagtttgtatttactcctttcccgtttacggttctaagacctccattgcttcatatctatttcagatatatgtattaactgttctaagcaacacaactatttctcgtcaaggatcttgggagtttttgaaatagttgcataatggagttgtcaaatcaagggcagacacccatgtcaactaacatgggttctcaaccattgccttcttcaaatattcaacctaatcaggctgagtatccgtctatgttttatccatctttgcctgctgactggggtgcacagccaatgttttctatgggagcttctgttccaattagttcgtattttattgttcctatgagtcaacaatcggtccaaattggtgcttctaggccagagactccgcgttcttcaggggcacattctctaagcagagtatcattgaggccaccccagcaagtgctaagtattcgaacatctttgccaacaatggttggatcacaacactctcctgctggcaagaaactgcaaccgacaattgcttctccaaaggttcaaatactgaaatctacacagtcacagtcatcgaacaaacgttctgcacagaaggagacaccatcaaaggttcaaactcagcaattggaatctgtgagatcaaagttcagggagtcactttctgctgctctgagaacagattctgatcagagtaagaatcaatcttctgatgtgcagcctgatgggtctgcagaccaaaagaaagagatggatgtagatgcagatcaagtggccaccacatcccaaggcatgagtgcagccaagtcggaagtattgacaagtgttggtgctgagaggcgtgctgaagatgagaagttaaacagtgatttagtttcgaacatagccacaccattaaacgcggacatccagcaacaaccagagaatgcttctttacaagatgaaatgttgggacaatatacagttgttgctgatgaactcttgcaaggtcatggactttgttgggtttctgactttgatgctggggttcctgaacctgccacacaacctaatttaaaaaggtccagggcttctgacattgaccctgttgttgcagacactctctcagaatctgagtccaaaagaatgaagtctgccaatgatgaggaagcgatagataaggatagcattattcagaaggcagatgatttagcagttagggttgaagaggagctgttcaaactatttggtggagttaataagaagtataaggagaaaggtagatctcttctatttaatctaaaagataaaagtaatcctgagttaagagagagggtattgtctggagatattacacctgatcgcctctgttcaatgactgcggaggaacttgcttccaaggagctatcggagtggcggttagctaaagctgaagaactagcacaaatggttgtccttcctagtaccgaggttgatgttagacgtttggttaggaaaacacacaaaggagaatttcaagttgaagtagaagaaacagatggtatctcagtggaggttgagcttggaggtaatcttcttactcaagttccatcaaaagcccctgaagatcagaccaaatcagacgataaagaaagtacagatgataaaacaggcatacaagacaatgacaaggcacctgatgggacttcacaagatgaagataatggggcaggcaagaacgatccacaagatgatttagaatatgttgataatgagaaaagtgaccttatgcaagaacttatggtggatgacttgaaagacactgaaaaccttccaccgatcccttcactagatgaattcatgcaaggtttagattctgaaccaccttttgaaaatctctcagctgggacgccagaagaagattcagatgatcgagacgaagctgacactactgcagaatctgcggaacttcctgaggaagaagttaaagtttctgcagcagagaagattgtatctgaagctgacctgccatcttcgcaggataaatctgagtccaagttagagtcacccaaagatgaggtgggttcaaatttgggccctgttgagcagcgtgaaggaaagctgataaaatcctccccagatagtgttgaagtcaaacaaacaactactgaaaatgtgctgaatcgtgactctactgtgcataatatggcaactactcttcctatgatacgtgaaagtatatgggagggtgcaattcaacttaccatgtcttcgctcacaaatgtcgttgccatcttcaaaaggtttgtttcatctgcagccttttcctttgaattaccaatatacaatcgtttctgttagcataccatgatgatttgacacattctcttcgatgcctttgtcttagttttaatttattaaaagcagattagtgctttacagaacacgtacatcttcttttgcacaaagcttttactgaactgtattctgcaatttcatcttctacattgtattcgcttggtcgtattttggaaattgattgtctgttccttcagaaagatacttgttgaactatatggcatatgcactccttggcaaaacacacacacaacttgcatatgtccaagactcgtatgataactttatttatttatactccaactattctgtcctggtcttaagcttgagtaagaatgataagtttgggaggcaataaaagcataaatcgccatcactggtcattaagtaagggtcaatgaaattggggggctttcgttgaagatctcagttctttcgcgcctcaggcaagtgagttatggaagtctttcttcctcatctggtgaagctagctgctgttgtttgattccttgtttctattggtttctcaagaggctcaaggtcttgctctacctaaattactttaggtttagaagctagacatctagcatcaaattaagtaataagtaaaaactgatagctcatggcatgcaagtatataaatatatcttcatgtgagaactgctaagagtaataatttataattagcaagcactgccaaatgtgacatgcttcagtgtacttctcttgattccgcagagagtgcattaagtaggtgtatgtcattgagggtccagcttggctacttcacctctttctgatgggaacttgtatacttgtgtatttgttcgatttatgtcttgttagttaatactgatctaaatcatcccttttgcaaagtttgctgatttaattaatgttgataacaatttacaactggttcttcattgttgtggcccagaatgccctgctactgtccaagtacacatgatccactctacctgaaagatagtgttgatatgtgtttattctgtattttatttttgtatttgtgatgacatgtattaaaatttcactttgcagtggtgaaaagccaccagtaaaagaatggcggagctttgttgaaatcaaggggagagtcaaacttagtgcctttcaagagtttgttgaacagcttcccaaatctaggagccgtgctataatggtaatcttgcatttttcctgttgaaaactaactaatatgtttaaatgtctgaggtctgggtcaggatgtttgaaaaatgttggtacttatatgctaaatttgccaagaaaacaaaaagctatgaattggagcatgtgtcagccagaaaagaaaacaattgttacagacaaaaaaaacaactcttgacatgatctcttgcatgtattttaagtcttaacttttgaaatgcttcttatgattgtatgcttagcatctagaagtatcactctgtttgggagttgttactcgatctatcctttatttaactaaatgcctcaaactatagttagtgcgcttttgtcatcacagattatggttcatgctggtgttgataggatagtaattgaatatgtccaactttgttcataggtaactgagttgtgttggaaggaaggttctcatgagagtggtcgccaacatctcttgcaggtttttctatcgtagccctttttctttcagagaaagaccttccttcaggagctagcttaatgaatgtttgtggatttgatcattaaatttgtctattcttctgcagacaattgactcgtatatttcagatgaaagagtagggttagctgaacctgcagatggaatagagctgtacctgtgcccttctcaagggaaaactgtggagattctctctcggcacctgccaaaggagcatttggagagtcttgctgtgtcagcatcctccatcatcggggtcatcgtctggcggaggcccaacgttcccaggatgccggcacaccctaggcatgatggttcccggaggccgtcgattttaaagaaaccgcaggttactggttctactccaggccctaggccctccctgcctatgagctcgcacggcgcgccgccgggttttccagttcagcgtcaccgccacgaggaagatgtaactgatgatgtccctccgggctttggccctggtgttgctagggatgaagacgatcttcctgaatttaattttgttaactcgtcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0208600, RefSeq:Os02g0208600