Os02g0209900

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Revision as of 02:19, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0209900| Description = Syntaxin/epimorphin family protein| Version = NM_001185923.1 GI:297720978 GeneID:9272269| Length = 1406 bp| Definit...")
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Gene Name

Os02g0209900

Description

Syntaxin/epimorphin family protein

Version

NM_001185923.1 GI:297720978 GeneID:9272269

Length

1406 bp

Definition

Oryza sativa Japonica Group Os02g0209900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6187355..6188760

Sequence Coding Region

6187355..6187840,6188311..6188760

Expression

GEO Profiles:Os02g0209900

Genome Context

<gbrowseImage1> name=NC_008395:6187355..6188760 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6187355..6188760 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaacgacctcttctcgtcggggtcgttcaagaagtacgccgacctgaagaaccaggcggcgctcgacgacatggagtccggcggcggcggcggcggcggcggcgagggcgcgaacctggagcagttcttcgaggaggtggagggcgtgaagggggagatgcgggggctggaggcgctgcacgggcggctgcaggcgtcgcacgaggggagcaagacggcgcacgacgcccgcgccgtgaggtcgctccgcgcccgcatggacgccgacgtcgagcaggtgctccgccgcgccagggccgtgaaggggaggctccaggcgctcgaccgcgccaacgccgccagccgcaagctccccggccgcggccctggctcctccaccgaccgcacccgctcctccatcgtctccggcctcggcaccaagctcaaggacctcatggacgacttccaggggctgaggagtcggatggcggaggagtacaaggagacggtggcgcggcgatactacacggtgacgggggagaaagccgaggagagcacggtggaagccctcatctcgtcgggggagagcgagacgttcctgcagaaggcgatccaggaacaagggcgcggccaggtgctcgacaccatctccgagatccaggagcggcacgacgccgtgaaggagatcgagcgcggcctgctcgacctccaccaggtgttcctcgacatggcggcgctcgtcgaggcccagggccaccagctcaacgacatcgagagccacgtcgcgcgcgccaactccttcgtccgccgcggcgccgtcgagctcgagacggcgcgggagtaccagcggagcagccgcaagtgggcatgcatcgccatcctcgccggtgttgtgctcgtcgtcatcatcgtccttcccatcatcgtcaacctccacctcttgaccattagatag</cdnaseq>

Protein Sequence

<aaseq>MNDLFSSGSFKKYADLKNQAALDDMESGGGGGGGGEGANLEQFF EEVEGVKGEMRGLEALHGRLQASHEGSKTAHDARAVRSLRARMDADVEQVLRRARAVK GRLQALDRANAASRKLPGRGPGSSTDRTRSSIVSGLGTKLKDLMDDFQGLRSRMAEEY KETVARRYYTVTGEKAEESTVEALISSGESETFLQKAIQEQGRGQVLDTISEIQERHD AVKEIERGLLDLHQVFLDMAALVEAQGHQLNDIESHVARANSFVRRGAVELETAREYQ RSSRKWACIAILAGVVLVVIIVLPIIVNLHLLTIR</aaseq>

Gene Sequence

<dnaseqindica>921..1406#1..450#atgaacgacctcttctcgtcggggtcgttcaagaagtacgccgacctgaagaaccaggcggcgctcgacgacatggagtccggcggcggcggcggcggcggcggcgagggcgcgaacctggagcagttcttcgaggaggtggagggcgtgaagggggagatgcgggggctggaggcgctgcacgggcggctgcaggcgtcgcacgaggggagcaagacggcgcacgacgcccgcgccgtgaggtcgctccgcgcccgcatggacgccgacgtcgagcaggtgctccgccgcgccagggccgtgaaggggaggctccaggcgctcgaccgcgccaacgccgccagccgcaagctccccggccgcggccctggctcctccaccgaccgcacccgctcctccatcgtctccggcctcggcaccaagctcaaggacctcatggacgacttccaggtgaggaaaaaaaacagcagctaaaaattatggctaaaacttttatatctttgagtgtattgttagtggtttaaaagttaatgctggaaaatagactacaatgtaaaaaactaaaatcaacttcaaatttcagttttaatattggtttcgatcagttttaatagtggctgttgcgatcaggtttccaccatattggtttgcacatttcttttcacaagggggacgatcgaaaagattttagaaattgaggaaatttcggaatcaaacaagttaaagctttaacaaatttatgttgaacttcaaaaatgcttgattaaaaaaataaatatttcagagatcataatgtcctatcgcggactataggacaataatctctaaaattattgaaattaatatccgaaacattaaacctgaccgtgataactgataaaccaataagaaaacgatgaaaaacaatgcaatacgtgcaggggctgaggagtcggatggcggaggagtacaaggagacggtggcgcggcgatactacacggtgacgggggagaaagccgaggagagcacggtggaagccctcatctcgtcgggggagagcgagacgttcctgcagaaggcgatccaggaacaagggcgcggccaggtgctcgacaccatctccgagatccaggagcggcacgacgccgtgaaggagatcgagcgcggcctgctcgacctccaccaggtgttcctcgacatggcggcgctcgtcgaggcccagggccaccagctcaacgacatcgagagccacgtcgcgcgcgccaactccttcgtccgccgcggcgccgtcgagctcgagacggcgcgggagtaccagcggagcagccgcaagtgggcatgcatcgccatcctcgccggtgttgtgctcgtcgtcatcatcgtccttcccatcatcgtcaacctccacctcttgaccattagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0209900, RefSeq:Os02g0209900