Os02g0211000

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0211000| Description = ABC transporter related domain containing protein| Version = NM_001052805.1 GI:115444980 GeneID:4328702| Length = 70...")
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Gene Name

Os02g0211000

Description

ABC transporter related domain containing protein

Version

NM_001052805.1 GI:115444980 GeneID:4328702

Length

7022 bp

Definition

Oryza sativa Japonica Group Os02g0211000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6226353..6233374

Sequence Coding Region

6226353..6226412,6226836..6227220,6227743..6227825,6227960..6228083,6228304..6228423
,6228495..6228655,6228899..6229057,6229172..6229334,6229504..6229629
,6229675..6229800,6230300..6230664,6231104..6231304,6231585..6231694
,6231819..6231903,6232453..6232581,6232663..6232768,6232884..6232972
,6233072..6233374

Expression

GEO Profiles:Os02g0211000

Genome Context

<gbrowseImage1> name=NC_008395:6226353..6233374 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6226353..6233374 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagccagctgcctcgcgcagaccaatgccctcttcaggaaaagcctcgtcatccagaggcgggcggggaagacgaactgctgcatcgtcctcttcccgctgctcctcttctcggccatcgggggcctccagatcgccatcaacgtcgagatgctgcgggagttcgccgccgccgcctccatcgactgcggcgggtgcggcggcggcgttgccgtggcggcgaacgccacgggggggttggactgcccgacgcggtgcgcgctgccgcgtgcccccaagtggccgccccttctgcagatcccgccgccggagcgccgcgccgtcggggacggggacctcctctcgtccgccggcgatctccccgacgccgcctcgtgcagagccgccgggtcctgcgccgccgccttccttgtcaccggcggcaaccgatcgtttgtagcaagggtgatggacaatatgttccctgctcataattcttcggcgaaactaccgtctgacatttccgctttgtctgattatgttctggcagaggcagatgatgagttggatttcaattcctttgaagtcagctcctttcttcagaagacatgcaccccaaaccagacactttcttttacatatcaaagtggcaatacaaccgagactaaacatgtgcaatgtacccaaggattaatgctctggcgtgacagtttgtggctcatcaacgatgaactctatagaggttactaccaaggaaataataagaagaagaccaatgaaatcgctgcagcttatgacttcttaagttctgatcaaggcaactttaacgtgttcatctcgtataactcaacaaaaaagtttgatgcttatgaacaagacatctcactcacttttaatcaaggagcatggcaagcacctagattggttcaagtttcacgactaatcaatatggcttcaaatgcataccttcacctaagggccagtggcctcaagatctcatttgattttgtcaaagacatgcccagagcagctcgaccaatgaggccaattgatatatcctcattaatagggcaacttccttatgtatggactatggaacttcttttcccggtaattttgaccaacattgtatacgagaagcaaaagaagctaaggattatgatgaagatgcatggtcttggtgatttttcatattggactatctcgtactgctatttttttcttctttcgctgctctatgtgatgtccttcacattatttggttctgttcttggtttaagattctttcgactgaacgactacagtgtgcagtttgtgtattacttcgcctatatgaatttacaaatttcgttcgcatttcttactgcgtcatgcttttctagtgtgaggacagctactgattatgaaatttactttgattatttggcatattgtgcctcagtgacaggatacttctacataattggttctggccttttaggagaattcttattcaggtcctatgttgaagatgttttcctctcaagaagctggattacacttttggagcttttccctgcattttcattgtatcgcattatctatgagtttgcacaatctgcattgctcgggaattatatgaactcttccgggatgaagtgggttgacttgaatgatcccaaaaatggaatgagaagtgttttgaccataatggtactagaatggtttctgttccttttattggcattctatttggatcacttcggttccttccaaaagggaataagaaaagcagcagtactatttcactcgcacattgataagaatcgttttcaagctactcagcagaccatccagcttcaagagttcaaagcttctgctgacaatgagaagacagatgttatcaaagagagagaaacggttgaacagatcttacaagaatcaaagaatagctactcgatcatctgtgacaaccttaagaaagtgtaccatggaaaagatgggaatgcaaaaaaaattgctgtcagagggctatctctttctatgccacgtgggcaatgttttggtgttcttggaccaaatggcgctggaaaaaccactcttattaacatgttgactggatttactaaacctacgtctggcacggcgtacattgaaggaatggacatacaattcgagatgaacaagatttatgcaggaatcggtgtttgtccacagcatgacttgctatgggaaacactgactggtcgcgagcatctgttgttctatggtagacttaagaatttgcggggtgcaccattatctcaggccattgagaaatctttgaaaagtgtgcgcctgtttgctggtggcattgccgataagcttgtaagcaaatacagtggtggcatgaaacgtcgtctcagtgttgcaatctctctaattggtgaccctaaggtagtttatatggatgaaccaagctcagggttggacccagcatcaaggaaagacttgtggaatgctgtcaagtctgccaagcaggacagggccataattctcacaacgcattcgatggaagaagctgaatttctatgcgatcggataggaattatcgcaaacggcagcttgcaatgcatcgggaactctaaagagctgaaagcaaaatatggaggctcatatgtcctcacagtaacaaccgcgacaggcgaggcggaggagatgaggagactggtccagtccatctcccctaccatgaacattgtgtaccacatctccgggacgcagaagttcgagatggcgaagcaggaggtgaggatctctcaagttttccgggccatggagcatgcgaagctcaggatgaacgttcttgcctggggcttggctgacacaacgctggaggatgtcttcatcagagttgccagggagagtgacagtgcatcatcctccgtggcctga</cdnaseq>

Protein Sequence

<aaseq>MAASCLAQTNALFRKSLVIQRRAGKTNCCIVLFPLLLFSAIGGL QIAINVEMLREFAAAASIDCGGCGGGVAVAANATGGLDCPTRCALPRAPKWPPLLQIP PPERRAVGDGDLLSSAGDLPDAASCRAAGSCAAAFLVTGGNRSFVARVMDNMFPAHNS SAKLPSDISALSDYVLAEADDELDFNSFEVSSFLQKTCTPNQTLSFTYQSGNTTETKH VQCTQGLMLWRDSLWLINDELYRGYYQGNNKKKTNEIAAAYDFLSSDQGNFNVFISYN STKKFDAYEQDISLTFNQGAWQAPRLVQVSRLINMASNAYLHLRASGLKISFDFVKDM PRAARPMRPIDISSLIGQLPYVWTMELLFPVILTNIVYEKQKKLRIMMKMHGLGDFSY WTISYCYFFLLSLLYVMSFTLFGSVLGLRFFRLNDYSVQFVYYFAYMNLQISFAFLTA SCFSSVRTATDYEIYFDYLAYCASVTGYFYIIGSGLLGEFLFRSYVEDVFLSRSWITL LELFPAFSLYRIIYEFAQSALLGNYMNSSGMKWVDLNDPKNGMRSVLTIMVLEWFLFL LLAFYLDHFGSFQKGIRKAAVLFHSHIDKNRFQATQQTIQLQEFKASADNEKTDVIKE RETVEQILQESKNSYSIICDNLKKVYHGKDGNAKKIAVRGLSLSMPRGQCFGVLGPNG AGKTTLINMLTGFTKPTSGTAYIEGMDIQFEMNKIYAGIGVCPQHDLLWETLTGREHL LFYGRLKNLRGAPLSQAIEKSLKSVRLFAGGIADKLVSKYSGGMKRRLSVAISLIGDP KVVYMDEPSSGLDPASRKDLWNAVKSAKQDRAIILTTHSMEEAEFLCDRIGIIANGSL QCIGNSKELKAKYGGSYVLTVTTATGEAEEMRRLVQSISPTMNIVYHISGTQKFEMAK QEVRISQVFRAMEHAKLRMNVLAWGLADTTLEDVFIRVARESDSASSSVA</aaseq>

Gene Sequence

<dnaseqindica>1..60#484..868#1391..1473#1608..1731#1952..2071#2143..2303#2547..2705#2820..2982#3152..3277#3323..3448#3948..4312#4752..4952#5233..5342#5467..5551#6101..6229#6311..6416#6532..6620#6720..7022#atggcagccagctgcctcgcgcagaccaatgccctcttcaggaaaagcctcgtcatccaggtgatggcctgatggcctctcgatcgatcttgctcttcgtttttcgggctcgatttcgtcgagccgtagagtttttatcagcagaattatgcctttctttgaaagaacatttttgtggcttcttcgttatcttgcttggatgattcagtagtcagaaacttagaatcagtgaagaaatgcttcttgtttagtggtggttttttttctgctcgcggatttgggtgaaaagaagtcgcatgttcaggggattagttctcgttatgttcaatgcggtgattccgatgctgcacgattttttgtttttttttctgattccaagattcgatttcccacccattttgctatgtttgttcataccaagattgtttttcttcgtcaagattagtcacccatggagctcgattttgctgttcttgtgtgcagaggcgggcggggaagacgaactgctgcatcgtcctcttcccgctgctcctcttctcggccatcgggggcctccagatcgccatcaacgtcgagatgctgcgggagttcgccgccgccgcctccatcgactgcggcgggtgcggcggcggcgttgccgtggcggcgaacgccacgggggggttggactgcccgacgcggtgcgcgctgccgcgtgcccccaagtggccgccccttctgcagatcccgccgccggagcgccgcgccgtcggggacggggacctcctctcgtccgccggcgatctccccgacgccgcctcgtgcagagccgccgggtcctgcgccgccgccttccttgtcaccggcggcaaccgatcgtttgtagcaagtatgctcctttttcttttcttttggtgcagttacaaggttgtgctcttgtcccgttgttttattttttttaaaaaaaaatttaccatccttaaaaatgtatcgggaagtactatcttcgtcctaaaatattgctacctagtataaaattaccgggtcggccgaaggattggccgaccaaattttattaagaagaaaatgagggttacaagtgtttacaagatcgtcctaaaggagtgtttacctagtataaaataggatactaacgagtagcattatgagtctggatataaacatattttcaaatgtaaaacttgatatctctaagtagtaggtatctcgaggtactaaaatgtaaaatctaggtacatccggatactttttaaggactataaaatttctccttttttaagactgaaaatggtttacatctccgatctctattgacatgcatatgttgacttgtagttttactctgacggtgaacagtctttcagtctttgatagcttgatctgcatgcaggggtgatggacaatatgttccctgctcataattcttcggcgaaactaccgtctgacatttccgctttgtctgattatgttctggttagtgtccttgatttcagtgtgacctttgttctggttgatctttttttttaaagaatagtatgtattagtgctgcgtatgtttagaagatggaaaagtgttgaggcattttgtgatgtatctataattgcaggcagaggcagatgatgagttggatttcaattcctttgaagtcagctcctttcttcagaagacatgcaccccaaaccagacactttcttttacatatcaaagtggcaatacaaccgagactaaacgtaagtttttctacatgtaagatacaaaagttgggttgcacattgtttagtagaaaaatgtgccgtaccaatggtgtcaactattctcaatactggtctattaaggttctaatgaacatggaaaagtgaataaattcatttacagacattttctctgttttcaaaactagcaatgttattacaacttagttattctaatgtttacttggacatggaatagatgtgcaatgtacccaaggattaatgctctggcgtgacagtttgtggctcatcaacgatgaactctatagaggttactaccaaggaaataataagaagaagaccaatgaaatcgctgcaggtaatctccaatgtgccctcaatcagttcttcaaatctgccactcattaacattgaattcattgtttgcagcttatgacttcttaagttctgatcaaggcaactttaacgtgttcatctcgtataactcaacaaaaaagtttgatgcttatgaacaagacatctcactcacttttaatcaaggagcatggcaagcacctagattggttcaagtttcacgactaatcaatatggtatccttttttccaagttgaaaagttggacatgtcgataatttacattcattatatcctccctaattgttcatgaatatttgtccatatatcatcgcatatataaccttatcagtgttgcacgcataccattctcaaatctgtattttaccactcatttgtgtactattctgtttactagctatttgatgatttcttatgcttcatcactgctctgcatttcatatagtttaaacattgcaggcttcaaatgcataccttcacctaagggccagtggcctcaagatctcatttgattttgtcaaagacatgcccagagcagctcgaccaatgaggccaattgatatatcctcattaatagggcaacttccttatgtatggactatggaacttcttttcccggtatgaatattgcaccagtttatttgaatcatgtgtgactttttgtgacacttttacaagcaaataactgagctgcaagcttaatttgtaatgtttaatgaattaatactctaggtaattttgaccaacattgtatacgagaagcaaaagaagctaaggattatgatgaagatgcatggtcttggtgatttttcatattggactatctcgtactgctatttttttcttctttcgctgctctatgtgatgtccttcacattatttggttctgttcttggtaagacaatcttttttatctaggatgtattcagtgattttggtctcagaattctgatatttcacctatttttcttagttcctggtttgatacaagaaaaaagaaacctcatggaaaaattataaattggaggcaagttgcttatgcttgtacctttatctgttttcaggtttaagattctttcgactgaacgactacagtgtgcagtttgtgtattacttcgcctatatgaatttacaaatttcgttcgcatttcttactgcgtcatgcttttctagtgtgaggacagctactggtatgctttgatatataagtaatctcagtatatccattttgtcagattatgaaatttactttgattatttggcatattgtgcctcagtgacaggatacttctacataattggttctggccttttaggagaattcttattcaggtcctatgttgaagatgttttcctctcaagtatgtacaagtttatcttttacaatgataccgtaattctttgttcgctgtatccattttgtcccttccattattacaattgtgcttatgtttttctcttgctagtcttgctatagtggccataggatctttctttttatttggctgtgtatgaggctatgagctgtcgtcatggtaactttcttagttttcctttaatagaaatcattttttttcagttgaatctacttaataatcaataaaaacatactgtctttttgaatcaaagctgtattttgtttcattatctaaaaaaaatgcatgttttcctttgcatataacagatggttctttatacccgatgaatgtaggattaaaatggtggtgtctaattagtaaagataaatatgtgggatatttttatgcagccaatatctatgattttagtgtttttctcatgtcagtgtctatcactattttccaataattttgtggaaattttgtatttgttcgtctcaaggaagctggattacacttttggagcttttccctgcattttcattgtatcgcattatctatgagtttgcacaatctgcattgctcgggaattatatgaactcttccgggatgaagtgggttgacttgaatgatcccaaaaatggaatgagaagtgttttgaccataatggtactagaatggtttctgttccttttattggcattctatttggatcacttcggttccttccaaaagggaataagaaaagcagcagtactatttcactcgcacattgataagaatcgttttcaagctactcagcagaccatccagcttcaagagttcaaagcttctgctgacaatgagaagacagatgttatcaaagaggtatgctcttttgttctgtatattcctgtaatttctaaagaaaatgatggatatgaaaggaaggatattcatattgatggtattaagcaggggtaagtctcgaacccagaccggctagcccaccaacttgtggtgctagctggtaagactcctggtctttctgaccatttatgttaagctttctaatcataggctagaagcagcttatatgtcagtttatcctttatagtatggcacgtcaaaagttagcttggatacttggagtctcactttatcttatttttaccttccttttttctttttaccaaacttcaatgctgtatggaatacaaatacataagatagtttaaacaagcataatatgttgaaattagtcctgcatgtatgtatttgcacagagcatcatgagtattaattttgttctatcatgatttctcagagagaaacggttgaacagatcttacaagaatcaaagaatagctactcgatcatctgtgacaaccttaagaaagtgtaccatggaaaagatgggaatgcaaaaaaaattgctgtcagagggctatctctttctatgccacgtgggcaatgttttggtgttcttggaccaaatggcgctggaaaaaccactcttattaacatggtaagtatgatttaattttagatcttaataataaaagaaataaataatatatttagatagccataaatctctagtatgtaaagtacaggccactttcaaggccaggaacaggcatatacatttctaaaaatctgaaaacatgtctaggtagtaagaaatgatccagattttctgtttgtcacaaatgatccctatatagattacttacaaatataactgatgtttcatttggtcacatgacattattggttaagggggttaattcttatcctgacaacagttgactggatttactaaacctacgtctggcacggcgtacattgaaggaatggacatacaattcgagatgaacaagatttatgcaggaatcggtgtttgtccacagcatgagtaatctaatctcactctgatgtttctgaattacagttttgtttagtttaggacagcctttaaggcaatttagtattggtgaacttaaattaaatttcccccttcttttattttcttgttgcagcttgctatgggaaacactgactggtcgcgagcatctgttgttctatggtagacttaagaatttgcggggtgcaccattatctcaggtaatatgtgaccatttggtaaataacgtactacctctgtatttaaatatataattttgttgattttatccagtcttagtgcacaactttagctactatttttattttggaatatagcgataatatctaacgaaactataatattgtaaaagcaattataatttataagtaaaattctacccatatgatttttatgttttcaaactaaatatcttgagagctattgatagtcaaagttttaaaagtttgacccaataaagtcaataatgtcggaagaagtaatatatggtgatttttttccatggatgaacatgatggattcgacttcaaacactatttacaagtgaaagatgagcttatcatctgcacataagatccaagacacattatcgtccaaggcgctttagcacagattattataaatactggttcaacaaacattttcccagtagttattctgttcttatgtggttatgatttcacgagaaattattataaaatacaagttctgaagcaatcatctaagatctcatatttcttattttataggccattgagaaatctttgaaaagtgtgcgcctgtttgctggtggcattgccgataagcttgtaagcaaatacagtggtggcatgaaacgtcgtctcagtgttgcaatctctctaattggtgaccctaaggtacaattcatatatgtcaaattcagggaaattttgaacattcttgcatgtataaatcatgcattttttaacattctgcaggtagtttatatggatgaaccaagctcagggttggacccagcatcaaggaaagacttgtggaatgctgtcaagtctgccaagcaggacagggccataattctcacaagtactgcactttgctttcaactctgatacaacagtataaccttagtccagttaatcaccatggaaatcttttgcaccacatcatattatcacatcatactttcacctatttccagcgcattcgatggaagaagctgaatttctatgcgatcggataggaattatcgcaaacggcagcttgcaatgcatcgggaactctaaagaggtacatctacacatgtaaactgatcacatatttcatatatggccattgatcccaaatgctaacttagtaacttgaacccccaaaatctcgcctttccagctgaaagcaaaatatggaggctcatatgtcctcacagtaacaaccgcgacaggcgaggcggaggagatgaggagactggtccagtccatctcccctaccatgaacattgtgtaccacatctccgggacgcagaagttcgagatggcgaagcaggaggtgaggatctctcaagttttccgggccatggagcatgcgaagctcaggatgaacgttcttgcctggggcttggctgacacaacgctggaggatgtcttcatcagagttgccagggagagtgacagtgcatcatcctccgtggcctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0211000, RefSeq:Os02g0211000