Os02g0224800

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Revision as of 02:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0224800| Description = Ndr family protein| Version = NM_001052871.1 GI:115445112 GeneID:4328772| Length = 4345 bp| Definition = Oryza sati...")
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Gene Name

Os02g0224800

Description

Ndr family protein

Version

NM_001052871.1 GI:115445112 GeneID:4328772

Length

4345 bp

Definition

Oryza sativa Japonica Group Os02g0224800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7035163..7039507

Sequence Coding Region

7035256..7035318,7037433..7037532,7037613..7037710,7037833..7037921,7038011..7038071
,7038153..7038239,7038309..7038386,7038483..7038539,7038631..7038686
,7038777..7038912,7039003..7039224

Expression

GEO Profiles:Os02g0224800

Genome Context

<gbrowseImage1> name=NC_008395:7035163..7039507 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7035163..7039507 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggactccggcggctccgtcgtgtcgatcgacgtggagcgcatctccttcggcggcaaggaacatcatatacataccaatcatggacccgtatctgttgcggtgtatggtgaccatgacaagccggctcttgttacttatccagatattgctttaaatcatatgtcttgcttccaaggattgctcttctgccctgaagctgcttcattgttgcttcacaatttttgcatttaccatatcagccccccaggacatgagttgggggcagctccaatttcgccaaatgctcctataccatctgttgatgatttggctgatcaggttgcagatgttctcgatttctttgggttaggttccgtaatgtgcttaggtgtcagtgcgggtgcttacattcttactctcttcgcagcgaagtatagggatcgtgtactaggtcttattcttgtttctcccctatgtaaacctcccacgtggactgagtggttttataataaggtggcatccaatttgttatattactatgggatgtgtggactggtgaaggagggcttactgcagcggtacttcagcaaggaagtgcgggggtgctctgatttacctgaatctgacatagtgcaagcttgtagaagtttgctagatcaacggcagagcatgaatgtgtggcgcttcgtacagacaatgaacatgagatatgacttgacagaagacctgaagcagcttcagtgtaggacccttatttttgtcggcgagtactctcagttccatactgaggctgttcacatgacatcaaagctggacaggagatactgtgctctagttgaggtccaagcatgtgggtcgctcataacggaggagcaaccacacgcgatgcttatacccatggagtacttcttcatgggttatggcctgtacagaccaagccagttggactgtagcccgcgcagccccctcagcccattctgtatatcacccgatctcctgtcacccgaaagcatgggagtaaaactaaagccaatcaagacaagagtcaggcttgaagtgtag</cdnaseq>

Protein Sequence

<aaseq>MGDSGGSVVSIDVERISFGGKEHHIHTNHGPVSVAVYGDHDKPA LVTYPDIALNHMSCFQGLLFCPEAASLLLHNFCIYHISPPGHELGAAPISPNAPIPSV DDLADQVADVLDFFGLGSVMCLGVSAGAYILTLFAAKYRDRVLGLILVSPLCKPPTWT EWFYNKVASNLLYYYGMCGLVKEGLLQRYFSKEVRGCSDLPESDIVQACRSLLDQRQS MNVWRFVQTMNMRYDLTEDLKQLQCRTLIFVGEYSQFHTEAVHMTSKLDRRYCALVEV QACGSLITEEQPHAMLIPMEYFFMGYGLYRPSQLDCSPRSPLSPFCISPDLLSPESMG VKLKPIKTRVRLEV</aaseq>

Gene Sequence

<dnaseqindica>94..156#2271..2370#2451..2548#2671..2759#2849..2909#2991..3077#3147..3224#3321..3377#3469..3524#3615..3750#3841..4062#gtaggagagagagacaagaagaagaagaagaagaagagagagagagagagagagaggaggcggcccgtccggcgtcgaggtgggcggcggcggatgggggactccggcggctccgtcgtgtcgatcgacgtggagcgcatctccttcggcggcaaggtccggggaccatctctctttccttcttgcttcctctcgccgtggtttcttgggtgggggcgctgctcgcattggggattcgggatgagcttggcggccatattttttttctttttggagattttcttggattttcgtcggttgcattgcgctgttcttgaatttttcctagtatatatggaggagtccaaactaacggagaatttttaggataccccgaatcttgcgagtcaaaccgtacgagaattcatctccgattaaccatgtgttttgctctatatttttttccccaaaaaagaagggagctgctttttatgcgcgtgtttacggcgtattttctcgctgctatttgtcaccgcaatctgcggttctgcattcgtcacctgctggagtagaatcgtagccgtgttcgtcgtcgcctacgtatgccgaaaattccacctgtaatagtgctacaacctgctgttcttgcctggccatatggtccttttctcgcggagaaaattaagctaatttagttcgtcagttagtcgccttgcatatgcgcttaattgcgcgatttttagctcaaaaagagtcagagttggactgccgttgcgtgcttgcttcgttgtcctaacaaccgcttttgttgcagcgcctgtttctttaattgtttcagttctttatttgattatctaggtttcatgctcgtaaatttccgtcgactattccactgtacaaattcctttttctctctatgtacgagagaaattggagctaaataaataattttttttatgtatggttgatgattatttgctctatagaatcttctgtccgtgtttgaccgtggactagtgtttgagtaagtgggtaaaaaatattgagtgtagtttacaggtctctttcatgtgaatttcaccagttttttttttaaataggatgcttgtgatgtggctgcaaaatcattcctctttacagaacaatcactcttcctgtgttagaaaaacatagtaattaggtgctgtcatttgggccttttgcttctgtgatggtgaagggatcgcttgtggttcgtatcatgatctgtggtactttcctttgtcctacaagagatggttgtggaatcatcgctttagttccactcatcataataaaactattatattattccccttttcttttgttagcatcttgtcagcctttagtataatatatgcagaaaacaaagatccttcaatcatgaagtcatcccctttgcgtcattttggagaaattctttccttcaagcgtcaggggaggactgccaccttttctcacctgatggagaaaaacaggaggatagttcttgcttgaccaagtttaaaggaccatttctctttgtatcggtgtctctgaggttgctgacaaacttagttgtagtacggtcacaggaagcacatgatttcttagttgttaagcattctgtagatgcatatatatttactttgattggaacatttctattatcttctttgtatacactttggggacttgagtgcttccatatggtgcgtttgcttatctcaaataataattgattttggtatagtgcaaatttaaatacattgttccattgattttcctcctagcaagttttaccttttgtactgactgtgttttttaccttctagtgttgatgaactgaaagttgtatcaatttgaaggcttatcttgattctaattatgatattcatctagctcaggatgtagacatgttgttggtttctctagtcttgcggattccatgcctatcctctggattccatgcctatctattttggacagataaggctaatttggcatatctattttgtattttagttaggattgggttttcatgacgatgcttcacattaacagtaatattttgttcttagctgatttgccacagttttcacctttttgtattcacagaacattttttttggctggaaaaatagggcctttctgttatgtaaactcatgcagcttcttttatgtgctttgcaatgtgcaaaaatctttttttctgttagatgctattttgattaaaattgttctcattgtttttctgttgtttaagcagttcttccactctcttgtttcttcaggaacatcatatacataccaatcatggacccgtatctgttgcggtgtatggtgaccatgacaagccggctcttgttacttatccagatattgctttaaatcgtaagtaccacataatagtttaaagtgcagctgttctctccgcaaattgttccagtaatccgacatacatttatttacagatatgtcttgcttccaaggattgctcttctgccctgaagctgcttcattgttgcttcacaatttttgcatttaccatatcagccccccaggacatgaggttggcattatgcattttgttagcactgaaatctgcatttgccttaaatatgacaaactatatacccgcaattttactgtcttgttttcgcccttttatgccctaatttgacaatcatgcagttgggggcagctccaatttcgccaaatgctcctataccatctgttgatgatttggctgatcaggttgcagatgttctcgatttctttgggtaatattctattagattgcctaaaatcttcaaatggccatgcccagtttttgtcaattctattctctgatcaaatttgctctttccaggttaggttccgtaatgtgcttaggtgtcagtgcgggtgcttacattcttactctcttcgcagtaggtgtttcttcaagccagcattttgtccattgcttattcatcgaaacttattattgaactatgtattttttatggcaggcgaagtatagggatcgtgtactaggtcttattcttgtttctcccctatgtaaacctcccacgtggactgagtggttttataataaggtagctgttggtaaatgacctaccaagttaatttaataatagggggttatactgactaattctttttaggtggcatccaatttgttatattactatgggatgtgtggactggtgaaggagggcttactgcagcggtacttcagcaaggtatctaaaattaatttcatttattctaattaccatattacattacctttgcatgcttgagccttttcttatggtatcctcgaattctattcttaggaagtgcgggggtgctctgatttacctgaatctgacatagtgcaagcttgtagaagtgtaagtatcacatttttttccttcctcgattgtttactcagctgttctttagatatattagatgttaactctctttgtacacattttccagttgctagatcaacggcagagcatgaatgtgtggcgcttcgtacagacaatgaacatgtacacattctacacttgttatcattttcaataactgcagggtcaacttccacgagactgagctctaacaaacctgggaacgatttacaggagatatgacttgacagaagacctgaagcagcttcagtgtaggacccttatttttgtcggcgagtactctcagttccatactgaggctgttcacatgacatcaaagctggacaggagatactgtgctctagttgaggtaaattcactagtgtgcttaattacctcaagattttcattgaaattaaaatgctggtttcataatgactttttttgccatctgttccaggtccaagcatgtgggtcgctcataacggaggagcaaccacacgcgatgcttatacccatggagtacttcttcatgggttatggcctgtacagaccaagccagttggactgtagcccgcgcagccccctcagcccattctgtatatcacccgatctcctgtcacccgaaagcatgggagtaaaactaaagccaatcaagacaagagtcaggcttgaagtgtagcatagcacacaggtaaataagggtggtgcagaggggtgtcgcttagggctgacatggtgtgagtttaggctaacctgatggtcggtttactgagttataattttttggtgggtaaaacaagataatttttatactgtcatgtagatataggaaatgctaggttggtcaggtctggtggggtggggttgtattccattaatttgtagccataaacctgtaaattgttacacattgtttatcaaaagcaaaggaaaataatagcagaaaggtgagctgttggtga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0224800, RefSeq:Os02g0224800