Os02g0229600

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Revision as of 02:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0229600| Description = Calponin-like actin-binding domain containing protein| Version = NM_001052896.1 GI:115445162 GeneID:4328800| Length ...")
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Gene Name

Os02g0229600

Description

Calponin-like actin-binding domain containing protein

Version

NM_001052896.1 GI:115445162 GeneID:4328800

Length

4462 bp

Definition

Oryza sativa Japonica Group Os02g0229600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7310235..7314696

Sequence Coding Region

7310235..7310441,7310556..7310662,7310818..7310997,7311082..7311177,7311278..7311359
,7311453..7312937,7313276..7313350,7313421..7313498,7313608..7313691
,7313785..7313865,7313973..7314191,7314298..7314548,7314648..7314696

Expression

GEO Profiles:Os02g0229600

Genome Context

<gbrowseImage1> name=NC_008395:7310235..7314696 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7310235..7314696 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccagcagcaacaatgccgccgccgccgccgcctcgcctgacccatcgaggcggcgggaggacgtcgtcgggtggttgctggcgctgttcccggacctgccgctgccgcctccgccggaggccaccgacgaggacctccgcgccgcgctcgccacggggaggctgctctgcgcgctgctccggaggctctgcccgggggccctcctcgacgacgcctccaccgacaacgtcggcaggttccgcgccgccgtcgagcggatgggcgtcgccaagttcagcgcctccgacctcgagaggggccaaatgacggctgttgtgaactgcatccttgccctcaaggatcggttcggatcgcgcggcggcgatgaccaccggaaccctggtttcctgaccagatgcgacagcgaagggggccggaagcgcgtcgaatccaagctgcaaaggatgctcactagcccaattatgtcaggtatacctggagtggacaaactgacaattgcaactgattttgtgatggtatttcagctcaagcaaggaggatatgctgatcagctcggtggcaaatattcagacttgctgaaatccactagcttggataatgcacctacgcagtcacttctgggtgttttcaacagcatccttgatgagagcattgagaggaagaatggacaaataccttatcgcattgcttgcttgctgaggaaggtcatactagagattgagaggcgcatttccacccaggctgggcatatacggaaccaaaataacctgattaaagctcgcgaagagaagtatcagtcaaggataagagtgctagaggtgttagctggtgggatggagaaagacaagtttggagataaagggcaactagcagtggaagatatggaaaggttaatgaagtaccaggatgatgttgttagattgatgaaagaaaatgaggatttggtgaggttgctgagagagaaggaagatatggttaggttgctaaaggagaaagaagatatggttagattgctgaaggagaaagaaggcatgattaacttgaaaacagtcaaagctgaagaaacacaacgaatagaagatgaagataaatataggataattaaggagaaggatgatgctttagatagattggtgaaggaaaaggaagaaatgattcggttgttgaaggagaaggatgatgtagttagactaatgaaggagaaggaagatttgcttaacttggaaaaaggtgaagttgagggtacaactaaaatgacagatgacaataaagacaggttgattaaggagaagaatgatgttgtgcttaggttgacagaggagaaggaagagatggttaggttactaaaggagaaggaagatataattagacttatgaaggagaaggaagatatggtttacttggaaaaaggggaggttgaggatagaaagcaaatgacagatgacattaaagacaaattgattaaggagaaagatgatatagtgtttaggttgacaaaggagaaggaagagataattaagttgcttgaagaaaaggaagatataattatacttatgaaggagaaggaagatatggttaacttgggaaaaggtgaggatgaggacagaaagcaaatggcagatgacaataaagacaggctgattaaggagaaagatgatatagtagttaggttaacaaaggagaaggaagagataattaaggagaaagatgatatagtagttaggttaacaaaggagaaggaagagataattaagttgcttgaagaaaaggaagatataattagtttgatgaagcagaaggaagacatgttcatgtctatcaaggagaaggaaaataaggctgaattgaagaaaatcgcggatgaagatgcagcaaggtcaattaaggataaggctgagataatgaggttgatgaaggagaaagaagatggtaacaataccattttgaaacttaagaaggaatcggaaacattaagatcatcatacgaggagagctgcaggttgttagaatctaagaaggaagatgtggccaggcttctcacagacaaggaaaacaatgacagtataatttcagaactcaagaaagagcttgaagaaacaaagagattgcatgaggcacacagtcagcaattagagactaaggctgcacaagtaagtaaggagttggaacagaggatagaagaagtaaagcttatgttagacgattctaccaagagaagaatagaacttgaggaattatccgaaactagaatccaattctggaaaaagaaagaagtggtgatcgatcaatttgtaagtttgcaagtacagaatgttcaggatttgaagctatcttctgtttccgttaggcatgaaatcttaaattgtcaaaacaagtggtctgaagaactagctggccttggaaaaagccttaaggtggtaacaaatactgcagaaaagtatcatggagctcttgcagaaaacagaaaattgttcaatgagatccaggaactaaaaggaaacatcagagtatattgtcggataagaccttttcgacctggggaggatgacaagtccagttcagttgaatatattggggacaatggtgaactagttctatcaaaccctacaaaacaagggaaggaagggggcaaaaatttcacatttaacaaagtttttggccctatcactacacaagatgctgtcttcaaggacatacagccactaattagatcagttcttgatggctacaatgtctgcattttcgcatatgggcaaactggatcaggaaaaacatacactatgatgggacctgaaaaggcaactgagaaggaatggggagtcaattatagggcattaaatgaccttttcaatatttctcatgaccgtagagacacaatcacttacgaacttggtgttcagatgattgagatctacaatgagcaaatccgtgatctccttggcagtggtggcgtgcagaagaaatatccttttcccccagacttgcattag</cdnaseq>

Protein Sequence

<aaseq>MSSSNNAAAAAASPDPSRRREDVVGWLLALFPDLPLPPPPEATD EDLRAALATGRLLCALLRRLCPGALLDDASTDNVGRFRAAVERMGVAKFSASDLERGQ MTAVVNCILALKDRFGSRGGDDHRNPGFLTRCDSEGGRKRVESKLQRMLTSPIMSGIP GVDKLTIATDFVMVFQLKQGGYADQLGGKYSDLLKSTSLDNAPTQSLLGVFNSILDES IERKNGQIPYRIACLLRKVILEIERRISTQAGHIRNQNNLIKAREEKYQSRIRVLEVL AGGMEKDKFGDKGQLAVEDMERLMKYQDDVVRLMKENEDLVRLLREKEDMVRLLKEKE DMVRLLKEKEGMINLKTVKAEETQRIEDEDKYRIIKEKDDALDRLVKEKEEMIRLLKE KDDVVRLMKEKEDLLNLEKGEVEGTTKMTDDNKDRLIKEKNDVVLRLTEEKEEMVRLL KEKEDIIRLMKEKEDMVYLEKGEVEDRKQMTDDIKDKLIKEKDDIVFRLTKEKEEIIK LLEEKEDIIILMKEKEDMVNLGKGEDEDRKQMADDNKDRLIKEKDDIVVRLTKEKEEI IKEKDDIVVRLTKEKEEIIKLLEEKEDIISLMKQKEDMFMSIKEKENKAELKKIADED AARSIKDKAEIMRLMKEKEDGNNTILKLKKESETLRSSYEESCRLLESKKEDVARLLT DKENNDSIISELKKELEETKRLHEAHSQQLETKAAQVSKELEQRIEEVKLMLDDSTKR RIELEELSETRIQFWKKKEVVIDQFVSLQVQNVQDLKLSSVSVRHEILNCQNKWSEEL AGLGKSLKVVTNTAEKYHGALAENRKLFNEIQELKGNIRVYCRIRPFRPGEDDKSSSV EYIGDNGELVLSNPTKQGKEGGKNFTFNKVFGPITTQDAVFKDIQPLIRSVLDGYNVC IFAYGQTGSGKTYTMMGPEKATEKEWGVNYRALNDLFNISHDRRDTITYELGVQMIEI YNEQIRDLLGSGGVQKKYPFPPDLH</aaseq>

Gene Sequence

<dnaseqindica>4256..4462#4035..4141#3700..3879#3520..3615#3338..3419#1760..3244#1347..1421#1199..1276#1006..1089#832..912#506..724#149..399#1..49#atgtccagcagcaacaatgccgccgccgccgccgcctcgcctgacccatgtacgtcttctttctctctccctttggtttcttgattcgattcaacgctttctttcttgatttcttgggtttcttggtttgatttggttggcggtgcagcgaggcggcgggaggacgtcgtcgggtggttgctggcgctgttcccggacctgccgctgccgcctccgccggaggccaccgacgaggacctccgcgccgcgctcgccacggggaggctgctctgcgcgctgctccggaggctctgcccgggggccctcctcgacgacgcctccaccgacaacgtcggcaggttccgcgccgccgtcgagcggatgggcgtcgccaagttcagcgcctccgacctcgagagggttcttgccctaatcgcgctgccccccccccccccccccccttttgccgccatgccaaattgacaaattccccacccatttctgattgagacactgttccatctagggccaaatgacggctgttgtgaactgcatccttgccctcaaggatcggttcggatcgcgcggcggcgatgaccaccggaaccctggtttcctgaccagatgcgacagcgaagggggccggaagcgcgtcgaatccaagctgcaaaggatgctcactagcccaattatgtcaggtatacctggagtggacaaactgacaattgcaactgattttgtgatggtgaatcatccaattgctggctgagagagagacatcttcttgtcttttgcttgtattcagagccatccagccctgtgttaggatccgatccgtattcgccgttgcaggtatttcagctcaagcaaggaggatatgctgatcagctcggtggcaaatattcagacttgctgaaatccactagcttggatgtaagtgcatctaattatccctactagtaatgagataccatgttttactttagaaaagtttttacattgtcacccaatgctggcttgttgcagaatgcacctacgcagtcacttctgggtgttttcaacagcatccttgatgagagcattgagaggaagaatggacaaataccttatgtaggcttctcagaaaagaaatgcagttagtttgttctttccaaatttaagtgatttcatgtttttaacaccttcccttgtacaaatgaatgtaaatgtttcattgtagcgcattgcttgcttgctgaggaaggtcatactagagattgagaggcgcatttccacccaggctgggcatatacggaacgtaagataaatattttctatatgtgttcttataccagattagtcctttgtgatttcttacttgtctgcagcaaaataacctgattaaagctcgcgaagagaagtatcagtcaaggataagagtgctagaggtgttagctggtggggtaagtgggcaaacacatgtaaactccagcaacttctctgagccatctatcttgactttgggttgttgcaagaattttgtgtacttcaagtgaagtattcacctggcctaaatgaggttttgaagatcctcctgtcaccattaattaataaatattaaaaagataaaatggcagacaaatggcaatgctgatacaattccctttgtcttatttttctctgagattgatatgtcaacagaatgactgggattcttgttcactctgtaaaagatgacaggtctttaaatcattagttcttgagaagcaatagataattttgatttactcttattatgcagatggagaaagacaagtttggagataaagggcaactagcagtggaagatatggaaaggttaatgaagtaccaggatgatgttgttagattgatgaaagaaaatgaggatttggtgaggttgctgagagagaaggaagatatggttaggttgctaaaggagaaagaagatatggttagattgctgaaggagaaagaaggcatgattaacttgaaaacagtcaaagctgaagaaacacaacgaatagaagatgaagataaatataggataattaaggagaaggatgatgctttagatagattggtgaaggaaaaggaagaaatgattcggttgttgaaggagaaggatgatgtagttagactaatgaaggagaaggaagatttgcttaacttggaaaaaggtgaagttgagggtacaactaaaatgacagatgacaataaagacaggttgattaaggagaagaatgatgttgtgcttaggttgacagaggagaaggaagagatggttaggttactaaaggagaaggaagatataattagacttatgaaggagaaggaagatatggtttacttggaaaaaggggaggttgaggatagaaagcaaatgacagatgacattaaagacaaattgattaaggagaaagatgatatagtgtttaggttgacaaaggagaaggaagagataattaagttgcttgaagaaaaggaagatataattatacttatgaaggagaaggaagatatggttaacttgggaaaaggtgaggatgaggacagaaagcaaatggcagatgacaataaagacaggctgattaaggagaaagatgatatagtagttaggttaacaaaggagaaggaagagataattaaggagaaagatgatatagtagttaggttaacaaaggagaaggaagagataattaagttgcttgaagaaaaggaagatataattagtttgatgaagcagaaggaagacatgttcatgtctatcaaggagaaggaaaataaggctgaattgaagaaaatcgcggatgaagatgcagcaaggtcaattaaggataaggctgagataatgaggttgatgaaggagaaagaagatggtaacaataccattttgaaacttaagaaggaatcggaaacattaagatcatcatacgaggagagctgcaggttgttagaatctaagaaggaagatgtggccaggcttctcacagacaaggaaaacaatgacagtataatttcagaactcaagaaagagcttgaagaaacaaagagattgcatgaggcacacagtcagcaattagagactaaggctgcacaagtaagtaaggagttggaacagaggatagaagaagtaaagcttatgttagacgattctaccaagagaagaatagaacttgaggaattatccgaaactagaatccaattctggaaaaagaaagaagtggtgatcgatcaatttgtaagtttgcaagtacagaatgttcaggtattagaaaaataacttccttttgttcttccttttcaaattttacggagttcttaaattctgcagttagtcaaaagtgttgtgtttcatcaggatttgaagctatcttctgtttccgttaggcatgaaatcttaaattgtcaaaacaagtggtctgaagaactagctggccttggtaagaattaaccttgtgattacttgtgggtttcatatacaaatacttcttttctcatcgatggattgcaactaacattaccagttgcaatcttcaacaggaaaaagccttaaggtggtaacaaatactgcagaaaagtatcatggagctcttgcagaaaacagaaaattgttcaatgagatccaggaactaaaaggtacatgtgaactacaatcatcagtccattttgtctggttatctaggtcaaaagatatcaccttggcatagtatttctgagcaggaaacatcagagtatattgtcggataagaccttttcgacctggggaggatgacaagtccagttcagttgaatatattggggacaatggtgaactagttctatcaaaccctacaaaacaagggaaggaagggggcaaaaatttcacatttaacaaagtttttggccctatcactacacaaggtacatgataagtggtcagtacaacttaatcttctgttgggtttccattgaagctattgcatcaaattagttcaacaaatccttcaaaaaattatatcccataatagtgtatgtcatatacatcaattctcttatccctcttattttgttaatagatgctgtcttcaaggacatacagccactaattagatcagttcttgatggctacaatgtctgcattttcgcatatgggcaaactggatcaggaaaaacatacactatggtacgctgaagctcagggcaaaaacatttggtctgtttatttcagtttgcgtgccagaagatttctctacagtcactatgtgtttacaacgatctgtttctatcaatttctcagatgggacctgaaaaggcaactgagaaggaatggggagtcaattatagggcattaaatgaccttttcaatatttctcatgaccgtagagacacaatcacttacgaacttggtgttcagatgattgagatctacaatgagcaaatccgtgatctccttggcagtggtggcgtgcagaagaaatatccttttcccccagacttgcattag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0229600, RefSeq:Os02g0229600