Os02g0250400

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Revision as of 02:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0250400| Description = Lipase, GDSL domain containing protein| Version = NM_001052979.1 GI:115445328 GeneID:4328886| Length = 3457 bp| Def...")
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Gene Name

Os02g0250400

Description

Lipase, GDSL domain containing protein

Version

NM_001052979.1 GI:115445328 GeneID:4328886

Length

3457 bp

Definition

Oryza sativa Japonica Group Os02g0250400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8530518..8533974

Sequence Coding Region

8530883..8531165,8531243..8531458,8531604..8531755,8531849..8532122,8533469..8533704

Expression

GEO Profiles:Os02g0250400

Genome Context

<gbrowseImage1> name=NC_008395:8530518..8533974 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8530518..8533974 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcagttcgggggattttggtcgtggcggtggttcttgcggtggcggcgattcttgctggggcggcggaggggaaggtgaacgggaaggcgaaggggaagtacagggcgctgttcaacttcggggactcgctggccgacgccggcaacctcctcgccaacggcgtcgacttccgcctcgctaccgcccagctcccctacggccagaccttccccggccaccccaccggccgctgctccgacggccgcctcgtcgtcgaccacctcggtgcgccccttgccgacgagttcggcctgccgctgctgccgccgtccaagctcaagaactccagcttcgctcacggcgccaacttcgccatcaccggcgccaccgcgctcgacaccccctacttcgaggccaaggggctcggcgccgtcgtctggaactccggcgccctcctcacccaaatccagtggttccgcgatctcaagcccttcttctgcaactccaccaaggtggaatgcgatgaattctatgcgaattcgctcttcgtcgtcggcgagtttggtggcaacgactacaatgcgccgctgtttgcggggaagggccttgaggaggcctacaagttcatgccggatgtcatccaggctatctccgatggcatcgagcaattgattgctgagggcgcaagggagctgattgtacccggtgtgatgcccactggatgcttccctgtctacttgaacatgctcgatgagccggccgatgggtatggcccccagagcggctgcgtccgtcggtacaacacattctcatgggtgcacaatgcacatctcaagcgcatgcttgagaagctccggcccaagcaccccaatgtgaggatcatatatggcgattactacacgcctgttatccagttcatgcttcagcccgagaagtttggattttacaagcagctacctagggcatgctgcggggctcctgggtccgttgcgaaggccgcttacaacttcaatgtcacagccaaatgtggtgaggctggtgcaaccgcgtgtgatgatccatcaacccattggagctgggatggcattcacctgacagaggcggcttacggtcacattgccagaggttgggtatatggtcctttcgctgaccaaccgatcttccaatcttcatga</cdnaseq>

Protein Sequence

<aaseq>MGAVRGILVVAVVLAVAAILAGAAEGKVNGKAKGKYRALFNFGD SLADAGNLLANGVDFRLATAQLPYGQTFPGHPTGRCSDGRLVVDHLGAPLADEFGLPL LPPSKLKNSSFAHGANFAITGATALDTPYFEAKGLGAVVWNSGALLTQIQWFRDLKPF FCNSTKVECDEFYANSLFVVGEFGGNDYNAPLFAGKGLEEAYKFMPDVIQAISDGIEQ LIAEGARELIVPGVMPTGCFPVYLNMLDEPADGYGPQSGCVRRYNTFSWVHNAHLKRM LEKLRPKHPNVRIIYGDYYTPVIQFMLQPEKFGFYKQLPRACCGAPGSVAKAAYNFNV TAKCGEAGATACDDPSTHWSWDGIHLTEAAYGHIARGWVYGPFADQPIFQSS</aaseq>

Gene Sequence

<dnaseqindica>366..648#726..941#1087..1238#1332..1605#2952..3187#actcctccccctcccaatcccaaatcgcaattactccccaagccgcgagagagcccgagagtaaactaatcgccatccgccaccgcgcagccgcggcagctagctcgcgagaagaaaacgccacgcgacccgagagcgagagagagagagagctaagccgccgtgcgccacgccaccaccaccaacccatcccaatctctctctctctctctcctcgtgctcctagctacaagaagaaccccctcacccccaccccggacacctacctagccgctacccctctctcttcctcttcttcttcttcttccctcttcttgtggtggtgggtttgacccaagaacggaggagggatagggcgggcggcgatgggggcagttcgggggattttggtcgtggcggtggttcttgcggtggcggcgattcttgctggggcggcggaggggaaggtgaacgggaaggcgaaggggaagtacagggcgctgttcaacttcggggactcgctggccgacgccggcaacctcctcgccaacggcgtcgacttccgcctcgctaccgcccagctcccctacggccagaccttccccggccaccccaccggccgctgctccgacggccgcctcgtcgtcgaccacctcggtgcgccccttggtttctccgctagattggatttcgatgtctgcctgctttgtgttgctgatggtttggttttttggtttggatcgcagccgacgagttcggcctgccgctgctgccgccgtccaagctcaagaactccagcttcgctcacggcgccaacttcgccatcaccggcgccaccgcgctcgacaccccctacttcgaggccaaggggctcggcgccgtcgtctggaactccggcgccctcctcacccaaatccagtggttccgcgatctcaagcccttcttctgcaactccaccaagggtataatcataaattgcatatgcccaaatccccaccttaccttgtagctacctcgcctcactgaatttggggatttgtttttgtttttatctccagagagaactggattggggaattgtatctgattgttttgatgtttttgcagtggaatgcgatgaattctatgcgaattcgctcttcgtcgtcggcgagtttggtggcaacgactacaatgcgccgctgtttgcggggaagggccttgaggaggcctacaagttcatgccggatgtcatccaggctatctccgatggcatcgaggtagaaattcaatagcttcgttgtgtcgcctatttgttagtggtcatgtggagaatgtgatttcaattatacaactgttcgtgtttggtgcagcaattgattgctgagggcgcaagggagctgattgtacccggtgtgatgcccactggatgcttccctgtctacttgaacatgctcgatgagccggccgatgggtatggcccccagagcggctgcgtccgtcggtacaacacattctcatgggtgcacaatgcacatctcaagcgcatgcttgagaagctccggcccaagcaccccaatgtgaggatcatatatggcgattactacacgcctgttatccagttcatgcttcagcccgagaagtttggtaagttcttgagctctttgatagttagctagctcaggaagcatcagttcgttcttatcctttatttcacatcggtactaaattggcttttctagcaaaataactgttttttagctcttgctgctctaatttacttgaacagatcaagtcaactgatacctagagtcaacttttcctcctgtcacccttgaaagacacaatatattatttttagatagttcagatctgggtagaggtgccttatctctctagtagcacactgcaatatttcaaattacagtaatgatggatcacaatttgtgatttgaaaccaattagagtagctccatctatgttcagagtaaattggaagcaaagttactaatcccatcttcattagaatcttttacactagtctgtaaagtagtatggctatcagttctattagtactctaccactctttgttcaaaccttgtcctgttgttaattgtcttcttgagagagggggccatcctgaactataatgagattccacccatgataggtaatgtggggctaacaattaggattgtctgatggtctgattgttatacaagctacatacacaggctgcccaacttgtttctccaggcaaccatgtaaaaaagctttgaaccttagccatactgtcacctactttaaaattatggttgtggcagctctgctcttgtttgatatgatctagttcagtttcaaaactgccacattttgattgtctccatacatattttgccaccgattcttttaaaacctcgcacatgggttcgagtgggtgtatattatcctcgtgagtttaattcgaatagcagtggcttgaaaacaccacaaataaataaaatgacacattggcacgttttccctacctaacctttttacctttttccaaccatcgtgtgtatcacaaatttcaacatgtccttgttgcggggagtacagacatgtaggaattgctctgttagctgagccatcctttttggtgatccacttctgttatctaatgcttgcttaccttgctggcaatgaccttttttatgctttgtagttagtgctttttaattagagggagcatcagcaggtagagttatgaaatcttctgcatagtttaatggccaagttgggcatcacggttcaatggccttgtcatctctagatcacatccgctagcatttctctttcattgtgtgtggtagcaacaaacacatctttggcccatttaattctgctaatagagactgtttctgtctcaactggtgaagaaaaaggattcagatgcattattgttgattaaaaattgaaaacatctaacgttcttgccttttcaattcaggattttacaagcagctacctagggcatgctgcggggctcctgggtccgttgcgaaggccgcttacaacttcaatgtcacagccaaatgtggtgaggctggtgcaaccgcgtgtgatgatccatcaacccattggagctgggatggcattcacctgacagaggcggcttacggtcacattgccagaggttgggtatatggtcctttcgctgaccaaccgatcttccaatcttcatgagaaagtcacttcttccgttgtaattgtagaggtgtatcacgatagtgcactgaaatggagcagggaaagtagttcttccatatggttccaaggttgcatacatgtatattttcattctattacattcattgcagtcaggtacaaaggtggaatagggctgtcaaaagcttgattttgtttatttgtcaggcgacataactatgaaaatgtaacagacacatgattgtgtaaattgcctccggaaatatgatacaaattgtctttttgagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0250400, RefSeq:Os02g0250400