Os02g0253300

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Revision as of 02:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0253300| Description = Protein of unknown function DUF247, plant family protein| Version = NM_001052989.1 GI:115445348 GeneID:4328906| Leng...")
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Gene Name

Os02g0253300

Description

Protein of unknown function DUF247, plant family protein

Version

NM_001052989.1 GI:115445348 GeneID:4328906

Length

4525 bp

Definition

Oryza sativa Japonica Group Os02g0253300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8669325..8673849

Sequence Coding Region

8669325..8669717,8670061..8670261,8671065..8671511,8671626..8671716,8672849..8673849

Expression

GEO Profiles:Os02g0253300

Genome Context

<gbrowseImage1> name=NC_008395:8669325..8673849 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8669325..8673849 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaacagaccgaacccatccctccgaaagactccttggaaaccgcggtggagcaaaagctcttccctgctcacgacgacggcagctccttcacaatcttccgtgtccccgcccacatccgcgaggagaacaagaagctgtatgagccgcagctggtgtccatcggcccttactaccgcggccgcgacgcgctccgcgccatggagcagcacaagttgcgcctcctccgccatttcctccagcgagcggcgaccgtcccgctctccgacttcgtgcgggcggttcgggccgtcgagcggcgcgcccgctgctgctacagcgagaggacgagcgtcttcgacggctacttcatcctcgagttcttcttcaagtggaacaggggcgagcccgacccgctctgcgacgtcggctggggcctcacgctgctgcactcggacctcctcctcctcgagaaccagatccccttcttcgtgctcgagcgcctctttgacaccttcttccgtggcgccgtaacgcaggacaatctagtcaagattctgctcatccagctcaagcttaacggcaccgtcgtgcccagacaaccactgcgtccggagttcaccgggcagttcgaccatttactccatcttttgcacgacaagttcgtgcccaagctcgaggagctggagttacctgcggtaaccaatggctcgccatctccgtcgccgcctcggctgctgctgataccctgtgtatcgctgctgcgagaggccggcgtcacgttcaggaagaagaggtcgccccgggatatgttcgacgtaacattcgacaggaagaggggagtcatggagttgctacgcatcgagatccatcttgcgaacctgacgcagctgatgaatctcatcgccttcgagcagagcagggggacaacgcgccgggactccggcgccgctgacgagctacagcgcgctcatgtcgtcgctggtcagatcggggcaggacgtctccgtgctccagcgggagctatttggttcgttggaattctcgccatagatgataggttcgatttgattttgaggcagatcgaggagtatgagcagaggcgaatggagtccaaggtgacgcccaccacctgttcgacgaagtgccccaatggcggcagcccgagcacaattgagagattcatctacatcaacgaggggactactccgacgggcgtcctggagcttgggaatggtgaggacaaggttcatgacccttacatcatcaccaaggattttcctgaggttacgctcaccacgtgttcgatgaaatgttccatccccgacatcgagcccaatctcaccatggttgagagggttaccttcgccagcacagccgctgcttctatggagttggtggctaacaagaacacaaccagaatcgcctacatcaacaccccggactatcctaaggtgacacatgctaaatgttcgacgttaggccttggtgtcaagggtggcgcataccatgccagggtcacgtgccaaaccatgatgggtgagccggagggcgttctaaattggattagtgggcatgagttcagattcgtgtatcctgaagatccattattcttactcaaatctctacaagtagttcacagaggtggtataattttcattgttattgaagaaattgcagaatacactcaagatcaaagaggagaagattttggtgttgcacattctggtaacaatgtgattgccattgttgaacaagagttagtctactttactctgagatgctccaaactaagaatctcattggtgatgataaatttgcaccttgtatcgaagaccttcaaacaacttgggatcctggtgggattggcagtgcttctcatcggctcggggacaagccgaattttaagaagagggattgttaaggacttgtggctgtattatgggctggagcagcgtctcgccaaacaacggcccaagcaagcccaagaagaatcatcaaaaagggacatggctgcagcacagagggtatcgaatagagaacgaataggatcggctgaggggttcctcggcggcggtggcgacctggaaccgggcttggttccttgtcgatctttaccttccctctttctctacttgtctagaagctactag</cdnaseq>

Protein Sequence

<aaseq>MEQTEPIPPKDSLETAVEQKLFPAHDDGSSFTIFRVPAHIREEN KKLYEPQLVSIGPYYRGRDALRAMEQHKLRLLRHFLQRAATVPLSDFVRAVRAVERRA RCCYSERTSVFDGYFILEFFFKWNRGEPDPLCDVGWGLTLLHSDLLLLENQIPFFVLE RLFDTFFRGAVTQDNLVKILLIQLKLNGTVVPRQPLRPEFTGQFDHLLHLLHDKFVPK LEELELPAVTNGSPSPSPPRLLLIPCVSLLREAGVTFRKKRSPRDMFDVTFDRKRGVM ELLRIEIHLANLTQLMNLIAFEQSRGTTRRDSGAADELQRAHVVAGQIGAGRLRAPAG AIWFVGILAIDDRFDLILRQIEEYEQRRMESKVTPTTCSTKCPNGGSPSTIERFIYIN EGTTPTGVLELGNGEDKVHDPYIITKDFPEVTLTTCSMKCSIPDIEPNLTMVERVTFA STAAASMELVANKNTTRIAYINTPDYPKVTHAKCSTLGLGVKGGAYHARVTCQTMMGE PEGVLNWISGHEFRFVYPEDPLFLLKSLQVVHRGGIIFIVIEEIAEYTQDQRGEDFGV AHSGNNVIAIVEQELVYFTLRCSKLRISLVMINLHLVSKTFKQLGILVGLAVLLIGSG TSRILRRGIVKDLWLYYGLEQRLAKQRPKQAQEESSKRDMAAAQRVSNRERIGSAEGF LGGGGDLEPGLVPCRSLPSLFLYLSRSY</aaseq>

Gene Sequence

<dnaseqindica>4133..4525#3589..3789#2339..2785#2134..2224#1..1001#atggaacagaccgaacccatccctccgaaagactccttggaaaccgcggtggagcaaaagctcttccctgctcacgacgacggcagctccttcacaatcttccgtgtccccgcccacatccgcgaggagaacaagaagctgtatgagccgcagctggtgtccatcggcccttactaccgcggccgcgacgcgctccgcgccatggagcagcacaagttgcgcctcctccgccatttcctccagcgagcggcgaccgtcccgctctccgacttcgtgcgggcggttcgggccgtcgagcggcgcgcccgctgctgctacagcgagaggacgagcgtcttcgacggctacttcatcctcgagttcttcttcaagtggaacaggggcgagcccgacccgctctgcgacgtcggctggggcctcacgctgctgcactcggacctcctcctcctcgagaaccagatccccttcttcgtgctcgagcgcctctttgacaccttcttccgtggcgccgtaacgcaggacaatctagtcaagattctgctcatccagctcaagcttaacggcaccgtcgtgcccagacaaccactgcgtccggagttcaccgggcagttcgaccatttactccatcttttgcacgacaagttcgtgcccaagctcgaggagctggagttacctgcggtaaccaatggctcgccatctccgtcgccgcctcggctgctgctgataccctgtgtatcgctgctgcgagaggccggcgtcacgttcaggaagaagaggtcgccccgggatatgttcgacgtaacattcgacaggaagaggggagtcatggagttgctacgcatcgagatccatcttgcgaacctgacgcagctgatgaatctcatcgccttcgagcagagcagggggacaacgcgccgggactccggcgccgctgacgagctacagcgcgctcatgtcgtcgctggtcagatcggggcaggacgtctccgtgctccagcggggtggcatcgttgacaacctgctgtccaacgatgacgaagcggccatcaacttcttcagccgtctgggcgatccgtgcaccatgcactacagcgacaacctgttcgctcaactgttcgacgatgtgaaatgctaccacgactcgagctggcacaagcacaggacgttgtttaaacgtgcccactgcagcactccgtggtcgatcatcgccctcgtgcttgcaattatagctttcttctactcgttcttcagtcaatctgtggccatctatggccaagcacgacgccattagatttgtcttctcattcttcagttaatatatatggccatgcaaggcatcattagatttatcgatctttctcgttcttcaagatcaatcaatcttcggccatcgagggcctaacacgtacggcatcattggatattataaagagagtgattttacaggtcttcctgaggtaccatgagatataagatagtagtatattttacgaaaacactccctgtcgagtgtccgatctcaggacaaaaatcgggcgccccccaaccggaagaggctcctctgaagtgggtggctgacatgtgggtccaccagctgtgcggcccacatgtcatcctctcaaagttagagggcagtacgtcaggggatcacgtcccccccaactgtaccactcatctcagcctcaccctcctcactcttcttctctcgctccgtcccaaataattccagccacttctacatgggtcctcgagatgacgacgccactgttgataatttttttcgatcaccacgatgtttcacctataatgtattgtggtatttattacagtcgtgctaaggacttgtggttgtattatgggctggagcagcatctcgccaaacaacggcccaagcaagcccaagaagaatcatcaaaaagggacatggttgtagcttagagggtatcaatctctaccttccctcttcctctacatggctagaagctactagaaccttctagcccttgtatccttccattttccacctcaaaaccctccactattctaacagactcggttgctccttgtgttgaatttggtactacttctcctgaaattgcgttgttgagtgggtctctaacaatttggtatcagagctatttggttcgttggaattctcgccatagatgataggttcgatttgattttgaggcagatcgaggagtatgagcagaggcgaatggaggtagatcaaagaagaagcgctgatctgctgtctctcaaggtggcggtagaatagtggatgcccgatatatagaagaaggatgaacacctgcgatttttggttggggatgagcagtccaaggtgacgcccaccacctgttcgacgaagtgccccaatggcggcagcccgagcacaattgagagattcatctacatcaacgaggggactactccgacgggcgtcctggagcttgggaatggtgaggacaaggttcatgacccttacatcatcaccaaggattttcctgaggttacgctcaccacgtgttcgatgaaatgttccatccccgacatcgagcccaatctcaccatggttgagagggttaccttcgccagcacagccgctgcttctatggagttggtggctaacaagaacacaaccagaatcgcctacatcaacaccccggactatcctaaggtgacacatgctaaatgttcgacgttaggccttggtgtcaagggtggcgcataccatgccagggtcacgtgccaaaccatgatgggtgagccggagggcgttctagtacatgatgcatcatcttaagtcttctcgtcatggttgatgcctgacctcaatcagtatacaagcatgtccatcaggtgtttgttgaaatgccccaatggtgacaagaggccactgatgaagtaccccaagagaaatccatggccaccccccacacagaactatgcattggtgaaaggacatgtgctgcaactaaccttgtttgtcctcaaatgtctcggggtcacgtgggtgcagcggggactcaagtcccccctacacccacaaaacccatggatacccccctaagccccccctcaattttttcatcatagttgataagataggaggtgctaaaggtcttataatagcattttagtatagtttaatactgagattatgtgtttatatcggtgtactcggtatgttgagtccccccaactttttgtttctggatccgcccttgaatggatgccaccttggttgccattgattggggtgatccaagagcatgtctgtgagcaagaactgatcatgtgtaggcattgggatccaggtaaagacaaggttcaccaacacaagatcttgttgggtgattggcttccacaaccctactcccattagagattttgggacataggtgatgataatgctattgggcactggagttgtggcgatcgtctcaagaagtgcaagagaaacaaccttggccaccacccacacaaacagacaacatgatcttattgtgcatggggctcagcccaaagaacttgcaaatggaaacaacacgcatgctactggaacttgtttggtttcaacgacagaattggattagtgggcatgagttcagattcgtgtatcctgaagatccattattcttactcaaatctctacaagtagttcacagaggtggtataattttcattgttattgaagaaattgcagaatacactcaagatcaaagaggagaagattttggtgttgcacattctggtaacaatgtgattgccattgttgaacaagaggtaggcagtaaatggaatctataattttttgcatctccttcacaactgcaagcatctgctaaaatggttgggattatacaatcagtggcaactagcttaaggccattgcaaaataagaaatgaagttgtgagctcattgttcatggggcaatccttccaaagcagatcatatgtttgactttgggtgtcttcttatggtggaaagatggcttggtattctgggatctcagtatttgattatggctattccaatgggtgacctgttacaaattcctgttgactgcaagctactgaatattttttgacagcatgaacatgctagaaggtttcagtgatgttgcagttagtctactttactctgagatgctccaaactaagaatctcattggtgatgataaatttgcaccttgtatcgaagaccttcaaacaacttgggatcctggtgggattggcagtgcttctcatcggctcggggacaagccgaattttaagaagagggattgttaaggacttgtggctgtattatgggctggagcagcgtctcgccaaacaacggcccaagcaagcccaagaagaatcatcaaaaagggacatggctgcagcacagagggtatcgaatagagaacgaataggatcggctgaggggttcctcggcggcggtggcgacctggaaccgggcttggttccttgtcgatctttaccttccctctttctctacttgtctagaagctactag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0253300, RefSeq:Os02g0253300