Os02g0256100
| Gene Name |
Os02g0256100 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001053003.1 GI:115445376 GeneID:4328920 |
| Length |
3124 bp |
| Definition |
Oryza sativa Japonica Group Os02g0256100, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:8863367..8866490 |
| Sequence Coding Region |
8863609..8863944,8864035..8864155,8864998..8865172,8865423..8865493,8865623..8866251 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:8863367..8866490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:8863367..8866490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgcgttgcatgggcatggcttcgcggtcaccgtgctactggtggtgttgttggtgcaatgtgacgcggcggaggcgacgacgtgcgccggtgcggtgccggcgaggccacggccggagacggtgtccatcgccgagttcggcggcgtgggcgacggccggacggtgaacacgtgggcgttccacaaggcagtgtaccgcatccagcaccagcgccgccgcggcggcaccacgctgctcgtgccggccggaacgtggctcaccggcagcttcaacctcaccagccacatgaccctcttcctcgccaggggcgccgtcctcaaggccacacaggagacgaggagctggccgctggcggagccgctgccgtcgtacggaagggggagggagctgccgggggcgaggtacaccagcttcatccacggcgacggcctccgcgacatcgtgattacaggtgacaagggaatcatcgatggacaaggtgatgtatggtggaacatgtggaggcaaaggacacttcagcataccaggcccaaccttctggaattcatgcattccagtggcattcacatctccaacattgttctcaagaattcacccttctggaacatccatcctgtttattgcgacaatgtggtcataaccaacatgatgatcatcgcaccacatgactcgcccaacaccgatggagttgatccagattctagcaccaacgtatgcatcgaggactcctacatctcaaccggcgacgatctcgtggccatcaagagcggctgggacgagtacggcatcgcctacgggcggccgagctcgggcatcaccatcaggcgcgtcaggggctcgtcccccttcagcggcatcgccatcggcagcgaggcatcgggaggcgtcagcaacgtgctggtggaggactgcagcatcttcaacagcggctacggcatccacatcaagaccaacattgggaggggcggcttcatcaggaacatcaccgttgacaacgtccgcatgaacagcgtccgcaacgggctgcgcatcgccggcgatgtcggtgaccacccagatgagcacttcagccagctcgcgctgcccaccgtggatgctgtcagcatcaagaacgtgtggggtgtcaatgtgcagcagcccgggtcgatcgaggggatcaggaactcgccgttcacgaggatatgcctcgccaacgtgaagctgtttgggtggaggaataatgcagcttggaagtgcagggacgtccatggcgcggcgctgggtgtgcagccggggccgtgtgcagagctcacgaccagcctttcttcagggttctgcagctattag</cdnaseq> |
| Protein Sequence |
<aaseq>MAALHGHGFAVTVLLVVLLVQCDAAEATTCAGAVPARPRPETVS IAEFGGVGDGRTVNTWAFHKAVYRIQHQRRRGGTTLLVPAGTWLTGSFNLTSHMTLFL ARGAVLKATQETRSWPLAEPLPSYGRGRELPGARYTSFIHGDGLRDIVITGDKGIIDG QGDVWWNMWRQRTLQHTRPNLLEFMHSSGIHISNIVLKNSPFWNIHPVYCDNVVITNM MIIAPHDSPNTDGVDPDSSTNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITI RRVRGSSPFSGIAIGSEASGGVSNVLVEDCSIFNSGYGIHIKTNIGRGGFIRNITVDN VRMNSVRNGLRIAGDVGDHPDEHFSQLALPTVDAVSIKNVWGVNVQQPGSIEGIRNSP FTRICLANVKLFGWRNNAAWKCRDVHGAALGVQPGPCAELTTSLSSGFCSY</aaseq> |
| Gene Sequence |
<dnaseqindica>243..578#669..789#1632..1806#2057..2127#2257..2885#actcatctgcttggctctcctcacaccacccttggattcttgcacttgggagcaagctatagctttgctttgccttcctctcttcaaccctcactctcagcattgttaagctcaggatttggccacctttctcctatagggatcacacaaacaccggtagaaaaaagctcttcttggagctctctgcttggcctctctctctttagtttagccgcaaacaatttcctctcattttttctttgatggccgcgttgcatgggcatggcttcgcggtcaccgtgctactggtggtgttgttggtgcaatgtgacgcggcggaggcgacgacgtgcgccggtgcggtgccggcgaggccacggccggagacggtgtccatcgccgagttcggcggcgtgggcgacggccggacggtgaacacgtgggcgttccacaaggcagtgtaccgcatccagcaccagcgccgccgcggcggcaccacgctgctcgtgccggccggaacgtggctcaccggcagcttcaacctcaccagccacatgaccctcttcctcgccaggggcgccgtcctcaaggccacacaggtctcactctcacctcgccaccgccatggccatgtttttcttttcctctcttcttcttggtggtgagtggtgtcgttgacatcgacgcaggagacgaggagctggccgctggcggagccgctgccgtcgtacggaagggggagggagctgccgggggcgaggtacaccagcttcatccacggcgacggcctccgcgacatcgtgattacaggtgaagaattgaagctcagcttagctcagctccggtatttctagttgttgcatggtggtagcttctctgctgctcactttctcccctgttgttttggtatactgtgttcttgtgatggtcttgattgtcaattcttaagtctcaaccaactaactttggtctcctggtcagagaatattcaaagagacatgcatacatcctgcaaaaaagaattctgcacacaccgaggaaaaaaagattatatgatagcatgggagtgagtgactaaaggaagactactttgttgcttacacgcatcagacataatagggtaataaataaaaggaaccgaaaagataatagacctagttaacgcaactttagataaatagtagtaagggatttgtccatcatggttaaaatatgtactcttccatggtggtttgtcagaggtttgttattttaaggtttaggccattactgagagatttagaatacaaacataccttggtgggtagcacggtggacgacctgttgtcggtaaagttgaatcttgctcctgttccatatctagtggatgtacatgcatgccaagaacaggaaatggaacagtgaactgatttgattctgtaccactctggtacagtttacatcacttctactattaagttggtgactggtttaagccagcattatatgctcaagcagacaacaagcagtcaggcttactctcaccaggcaactgaactaactgtgctcttatttcgtctgtagcaattttctctgactgttcctgcaaaagaactcattaagattgatgcaagtaattaacatgtcagattttttttatattaaaaaaaaaggtgacaagggaatcatcgatggacaaggtgatgtatggtggaacatgtggaggcaaaggacacttcagcataccaggcccaaccttctggaattcatgcattccagtggcattcacatctccaacattgttctcaagaattcacccttctggaacatccatcctgtttattgcgagtaagcacacgcttgaaagttgaaatgttcatctccttcctgcaaaaatttgtcactgcttaatatttctttcagagcaatgttggaaggccgaaaaatagttgatatgtgaaaatttcaatacaatccattatggaatagttaccagaaataagaaatcttgtgacacagctacaaaattcttgagaatgttcagtttcaaatgcccatttatgctgaaatactgatccaattcattttctacacccagcaatgtggtcataaccaacatgatgatcatcgcaccacatgactcgcccaacaccgatggagttgatccaggtatgcaaattcatcttaagcttctggcacacaaacaaaccacatataaattgattaatttttctttgctacatgcctgaccatccaagagtacatggaacatgctaataatactgaatcctcccacagattctagcaccaacgtatgcatcgaggactcctacatctcaaccggcgacgatctcgtggccatcaagagcggctgggacgagtacggcatcgcctacgggcggccgagctcgggcatcaccatcaggcgcgtcaggggctcgtcccccttcagcggcatcgccatcggcagcgaggcatcgggaggcgtcagcaacgtgctggtggaggactgcagcatcttcaacagcggctacggcatccacatcaagaccaacattgggaggggcggcttcatcaggaacatcaccgttgacaacgtccgcatgaacagcgtccgcaacgggctgcgcatcgccggcgatgtcggtgaccacccagatgagcacttcagccagctcgcgctgcccaccgtggatgctgtcagcatcaagaacgtgtggggtgtcaatgtgcagcagcccgggtcgatcgaggggatcaggaactcgccgttcacgaggatatgcctcgccaacgtgaagctgtttgggtggaggaataatgcagcttggaagtgcagggacgtccatggcgcggcgctgggtgtgcagccggggccgtgtgcagagctcacgaccagcctttcttcagggttctgcagctattagtgtgatccagttgtataatgttttttgattagaaaggttgtgcttgctttttttttaggtttgactgctccctaattgtggttgggattgatcaatatgttaggcttgtgctaatcagttaaggagttttaggtgtctttttgttagagaaaggtttggcttctaagttgtcagtctgagtgcaaatatgttctaatctgaataataaatcccagcttgtgtgagattaatactccgtc</dnaseqindica> |
| External Link(s) |
