Os02g0260700

From RiceWiki
Revision as of 02:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0260700| Description = Similar to GAMYB-binding protein (Fragment)| Version = NM_001053019.1 GI:115445408 GeneID:4328938| Length = 5227 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0260700

Description

Similar to GAMYB-binding protein (Fragment)

Version

NM_001053019.1 GI:115445408 GeneID:4328938

Length

5227 bp

Definition

Oryza sativa Japonica Group Os02g0260700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9111761..9116987

Sequence Coding Region

9111858..9112122,9114029..9114157,9114873..9114994,9115091..9115154,9115502..9115781
,9115910..9116726

Expression

GEO Profiles:Os02g0260700

Genome Context

<gbrowseImage1> name=NC_008395:9111761..9116987 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9111761..9116987 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgggagcgaggcggcggcggcgcaggaggcggagatggacccggacttctcgggcgggggcggtgggggccccagcttcgagttcgccttcaactcggtcaacttctccgaccgggtgctccggatcgaggtcgtcgcgggggacgacgacgacgacgacgaccacgcgcccggctccagccgggacggcggggccggctcgctctcggattgggcgcgccaccgcaagcgccgccgcgaggagctcctcaaggagaaagagtctgaagcagtcatgccagaccagataaattgcaaagtagaaccagaagaatgtgatgcatatgaagaaaatcaagaagaacctgtagcaatgatggacgactctccacccagtgttggccctgatggtgatgatggaccaagtatggactcaccttggagtggtggggtgagcacaccagttctaagagtaaagaacatttatatcagttcagcgattcttgcagcaaaaagtcctttctttttcaagcttttctcaaatggcatgaaagaatctgatgagaggcaggcaacccttagaattactgattcagaggaaaatgcccttatggagcttttaagctttatgtacagtggaaagttgacatcaactgaccctactcttctactggatattctgatggctgccgacaagtttgaggttatttcgtgcatgaggtactgcagtcagttgctcacaagcttgactatgactacagaatctgcactactctacctagatcttccatgctccatttcgatggctgctgcagttcaacctctgacagatgcagccaaggaatatctttccaacaaatacaaggatttgactaagttccaagatgaagtgatgaacatccctcttgctggaatcgaagccatcttgtcaagtaatgacctccaggtggcatctgaagatgctatctacgatttcttgatcaggtgggctcgcgcacaataccctaaatcagaggaaaggcgtgagatcttgagttctcgtttgcttccgctcgtgcgattcagtcacatgacctgtaggaagctgcggaaggtcctaatatgcaccgatctggaccatgagcaagcaaccaagtgtgtcactgaggcacttctatataaagctgatgctccacacaggcaacgtgctctcgcagcagacgtaacaacctgtcagaaatttgcagagcgggcttacaagtacagacctttgaaagttgttgagtttgaccgaccctacccacagtgtatagcatacttggatctaaagcgcgaagagtgctcccggctcttcccgtcaggtcggatgtactctcaagccttccatcttgcagggcagggcttcttcctctcagcacactgtaacatggaacagcagagtacgttctactgcttcggtctcttcttagggatgcaagagaagggctcaatgagcgtgacagtagattatgagtttgctgcaaggacaagaccgtcaggagagtttgtgagcaagtacaagggtaactacacgttcaccggtgggaaggcggttggttacaggaatctctttgcgataccatggtcgacgttcatggctgacgacagcctcttcttcctcgacggcgtgttgcatctgagagctgaattgacgataaagcaacccactgtctaa</cdnaseq>

Protein Sequence

<aaseq>MAGSEAAAAQEAEMDPDFSGGGGGGPSFEFAFNSVNFSDRVLRI EVVAGDDDDDDDHAPGSSRDGGAGSLSDWARHRKRRREELLKEKESEAVMPDQINCKV EPEECDAYEENQEEPVAMMDDSPPSVGPDGDDGPSMDSPWSGGVSTPVLRVKNIYISS AILAAKSPFFFKLFSNGMKESDERQATLRITDSEENALMELLSFMYSGKLTSTDPTLL LDILMAADKFEVISCMRYCSQLLTSLTMTTESALLYLDLPCSISMAAAVQPLTDAAKE YLSNKYKDLTKFQDEVMNIPLAGIEAILSSNDLQVASEDAIYDFLIRWARAQYPKSEE RREILSSRLLPLVRFSHMTCRKLRKVLICTDLDHEQATKCVTEALLYKADAPHRQRAL AADVTTCQKFAERAYKYRPLKVVEFDRPYPQCIAYLDLKREECSRLFPSGRMYSQAFH LAGQGFFLSAHCNMEQQSTFYCFGLFLGMQEKGSMSVTVDYEFAARTRPSGEFVSKYK GNYTFTGGKAVGYRNLFAIPWSTFMADDSLFFLDGVLHLRAELTIKQPTV</aaseq>

Gene Sequence

<dnaseqindica>98..362#2269..2397#3113..3234#3331..3394#3742..4021#4150..4966#gcccttgtcgtccaaccctcctctcctcccctcctcgtcgcggggctagggttacgccccctcctcctcctcctcctcctcctcctcgtgtgggggcatggccgggagcgaggcggcggcggcgcaggaggcggagatggacccggacttctcgggcgggggcggtgggggccccagcttcgagttcgccttcaactcggtcaacttctccgaccgggtgctccggatcgaggtcgtcgcgggggacgacgacgacgacgacgaccacgcgcccggctccagccgggacggcggggccggctcgctctcggattgggcgcgccaccgcaagcgccgccgcgaggagctcctcaaggagaaaggtgcgttgttgaaaccgcccaaattaaacgcttgtttcgtcaattttctttttaattttcgaattgtggacgatcgttttacgaaaatttcggtgccttcgatcatatattaggtggtcaatgaaaagcgaccagggtaacggagaatggatgaaaggggattttatttttctccttccaatttttagatgctctcgtgtacttgtaatagataccttttcagaatttgatattttgttctaggccgttggataattggtgatgcaagggatacaattgtgcaacctagaaattttggaagaacctgtaatcttgtactaattgattatacctgtaggatgatatgggtaagaataattcttttcatgcattgtatggataggcatggtttatgcatggatccatgtagcatactcgcctcgggttgaggggacaatgtggtcaattgtttgagataaagtgaggttatctagagaattggttgttgcatagtatataaacgagggataacgcctttgtagttcatacttctggttgggtgcacgcactagaagtatggaactgattttgttgaaaatttgatcatgaatgttggaaattgtatcatgcaatgtggctattgtgggcatattattgaacaacccttggttatcttggttatatgtttgtagcttataatatagtgattagttttagttgattttcttagattgtgttccaatgttcccccattttgtgtatacctgtacttttaatgagtaccttatgtaataatgtgtgcatattcagttggttatcatgcttcttctggtgaccaaatcagttcccactgactgaaattttttggctagtttatgtgtcaaacaaatgggtcaacactctgtagaaagagctaaagtgactgtgacaacaagccaaatcctcttgatacctagagttctctctttattttttcgtaggtttctatgatgttttttatgaaattcggagacctgcataagtcctactgcacttatgcatcttgtgtgagggcattttgtgctacacagtccacaatgtatacaagatactttgcatgaaaaatgggtttaagggctatgtactgctttgcaaagtgattgttagttttctgtttctccttatggttatatttgaaaggggtatggtgggggttggggggtaaataatacatttttataatgaagggacgcgtgaaaatatgctttgcaaaataccgttagtttttgtgtttaatcttcagacttcagttgcttgttagctgtgccgatcatgatctcaatgcttgttttgtgcttcttaggtcatgctcaaaggtagagcccggtatgggctcttatgcaaacatgtcatttagaaactgcccccttacaagagttgaggcaacaaaggctctaaccattaaccctcctaaatagttttttttattactcttctttcttttccccaccctcatgcagcaaaattttgttttatagaggctaagagtcgatgttaagcttaacattgatgtttctctctcctctttctcttccatgtcagcaaatttgcctagttggcaatgctatgagccccctactagtgactgttgtacataccctaattgtaattatgaaagtccttgattaccaattactgccacaagtcatgacttgtattttcatgttaccttctgttttacaattttctattttcattagtgatggcttcatgctgtagctataactgtgattacttgctgttatctacaatgtgccttgtaccttgatgatctttttctttttctgatgctttttttttgttacatatgattgtctagtgctacttatgcatccatccttgttctttgtgatgggagacttattttactaccaattgctatctgcagagtctgaagcagtcatgccagaccagataaattgcaaagtagaaccagaagaatgtgatgcatatgaagaaaatcaagaagaacctgtagcaatgatggacgactctccacccagtgttggccctgatggtatgtactgatgcaagttctgctacctagggtcagtctgcagtgtcgttttcctaacatgttatgttgcactgtgatgtggaatctaattatttagaatctttagtaaggctgtgttcgctatgggttgttcccaacttggaacagtagcacggaaaacggagcaatccattagcgcgtgattaattaagtattagctattttttttttcaaaaatggattaatttgattttttttaagcaacttttgtatagaaactttttgcaaaaaacacaccgtttagcagtttgaaaagcgtgcgcgtggaaaacgagggagataggttgggaaaatggacgtccgaacacagcctaagacttttctgttagagccaaacaagaaacttagaactaaatgctactattatgcatgcatttgtaaatccatcacaatgctgtcggtatgatttgttcagattactagaagcacagatacaagaaggattcaatatttcatattgttttgttatcattccttctgatagcttgtcttgattttcctgataccctgctctattaattgtatgtaattaatctgcactcatagagaagtacagtgtgctccaagtgtttttaacaactaaaaacctgtctggtgatttgtccctgggttgtgcgccttttactaattctttattgttttcccccaatattgatccgtctgtggtattttacaggtgatgatggaccaagtatggactcaccttggagtggtggggtgagcacaccagttctaagagtaaagaacatttatatcagttcagcgattcttgcagcaaaaagtcctttctttttcaaggtattctggtcaccttatcaagtgaatttgcactgtactctactcagtttgctgtcagcttcctagttcctaaaaactgtaatttgttgttcttagcttttctcaaatggcatgaaagaatctgatgagaggcaggcaacccttagaattactgattcaggtaatgcgatacctctagttaactcaaactttcttcctaacttattataatttgtgttgcagttgtgctataattctgcgtaatattcctaatttatactatattgtaatgtaatattgattttaggttttatggtgaaggtggtttctgcttctcctctttttgtctttgatattatgattagtctctttttcttcattggcttcacatattaaatagatgttttgtcaatctatctgccttcatgcatgcacaacttccttgatcatttacggaagtcaaatgatcaataattttctcttgaactctttccatatgcctcattatcttcattttacttggaacagaggaaaatgcccttatggagcttttaagctttatgtacagtggaaagttgacatcaactgaccctactcttctactggatattctgatggctgccgacaagtttgaggttatttcgtgcatgaggtactgcagtcagttgctcacaagcttgactatgactacagaatctgcactactctacctagatcttccatgctccatttcgatggctgctgcagttcaacctctgacagatgcagccaaggaatatctttccaacaaatacaaggatttgactaagtgagtgagcttcattggatggaaccttttttcctgttcgaggattaagccgagcgtagacattattgtcatgaaaccactgtaaggggacactcaagagcttggtttcttctcttttcttttttcaggttccaagatgaagtgatgaacatccctcttgctggaatcgaagccatcttgtcaagtaatgacctccaggtggcatctgaagatgctatctacgatttcttgatcaggtgggctcgcgcacaataccctaaatcagaggaaaggcgtgagatcttgagttctcgtttgcttccgctcgtgcgattcagtcacatgacctgtaggaagctgcggaaggtcctaatatgcaccgatctggaccatgagcaagcaaccaagtgtgtcactgaggcacttctatataaagctgatgctccacacaggcaacgtgctctcgcagcagacgtaacaacctgtcagaaatttgcagagcgggcttacaagtacagacctttgaaagttgttgagtttgaccgaccctacccacagtgtatagcatacttggatctaaagcgcgaagagtgctcccggctcttcccgtcaggtcggatgtactctcaagccttccatcttgcagggcagggcttcttcctctcagcacactgtaacatggaacagcagagtacgttctactgcttcggtctcttcttagggatgcaagagaagggctcaatgagcgtgacagtagattatgagtttgctgcaaggacaagaccgtcaggagagtttgtgagcaagtacaagggtaactacacgttcaccggtgggaaggcggttggttacaggaatctctttgcgataccatggtcgacgttcatggctgacgacagcctcttcttcctcgacggcgtgttgcatctgagagctgaattgacgataaagcaacccactgtctaatgtactgctgccaaactcaagttggctttgcgctcgagtgggtgatagtgcgaaacatcacatgctgcagatatcgtattgttttttttccccttcttctatgcttaaacccttttgttgatagaaactttgcaaatgacaagtggaaaaaaaaaggactaaaaccggtctcttttactggcattgtggaagaagcttatgctgctccagtcgattgtgaaaaggttaccataccagctgaagatatgatatatgagcgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0260700, RefSeq:Os02g0260700