Os02g0261000

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Revision as of 02:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0261000| Description = Harpin-induced 1 domain containing protein| Version = NM_001053020.2 GI:297598953 GeneID:4328939| Length = 4734 bp| ...")
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Gene Name

Os02g0261000

Description

Harpin-induced 1 domain containing protein

Version

NM_001053020.2 GI:297598953 GeneID:4328939

Length

4734 bp

Definition

Oryza sativa Japonica Group Os02g0261000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9135625..9140358

Sequence Coding Region

9135625..9136481,9140343..9140358

Expression

GEO Profiles:Os02g0261000

Genome Context

<gbrowseImage1> name=NC_008395:9135625..9140358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9135625..9140358 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacaagcctccgccgccgccaaccaagcccaagcccaagccggctacggctgctcaacccgcgccggcgccggcgacggcgaggacgacgccgccgctcaagaagccaccgccgctggccccgcccacgcaggcgcgcccgctcaagccgccgccggcgcaccagtacaggcagcagcagcagcagcagccggctaatcggaagcggcagtacgggaggcaccgcggcggaggcggcgggtgctcggggcggcgggtgtgctgcctcgccacggggttcgtcctcctcgcgctctgcctcgcgctcgccgccgcgtgcctggcctacctctactaccacccgcgcccgccgtcgttccaccttcagccgctcgccgccacgcggttccgcgtcgggaactcctcggcggtgtccgccatggacgtcaccgccgccgtcagggtggtgtcgtggaaccccaacgaccgggtgtcgttcgagtacggcgacggggagggccgcgtggcgctcgccgacgccgacggcgacgtcgcgctgggctgggcgcccgtggccgggttccgccacgcgccgcggagcgtggcgacggtggcgttcgtggcggcggcgaagggggtggtggtcgacgaggccgtggcggcgcgcgtccgcgaccggtaccggcggcggcagctggcgttcaaggtggtggtggacacgcacgtcggcgcgcgcgccggcgcggtgcgcaccggcatggtgcccgtgaggctgctgtgcgacggcggcgccatggcgccgcgcggcggcgtgtccgggagcgtggtggggcccatgagcaagtgccaggtctacctcttcagagtcagatggtttagcttgaactga</cdnaseq>

Protein Sequence

<aaseq>MADKPPPPPTKPKPKPATAAQPAPAPATARTTPPLKKPPPLAPP TQARPLKPPPAHQYRQQQQQQPANRKRQYGRHRGGGGGCSGRRVCCLATGFVLLALCL ALAAACLAYLYYHPRPPSFHLQPLAATRFRVGNSSAVSAMDVTAAVRVVSWNPNDRVS FEYGDGEGRVALADADGDVALGWAPVAGFRHAPRSVATVAFVAAAKGVVVDEAVAARV RDRYRRRQLAFKVVVDTHVGARAGAVRTGMVPVRLLCDGGAMAPRGGVSGSVVGPMSK CQVYLFRVRWFSLN</aaseq>

Gene Sequence

<dnaseqindica>1..857#4719..4734#atggccgacaagcctccgccgccgccaaccaagcccaagcccaagccggctacggctgctcaacccgcgccggcgccggcgacggcgaggacgacgccgccgctcaagaagccaccgccgctggccccgcccacgcaggcgcgcccgctcaagccgccgccggcgcaccagtacaggcagcagcagcagcagcagccggctaatcggaagcggcagtacgggaggcaccgcggcggaggcggcgggtgctcggggcggcgggtgtgctgcctcgccacggggttcgtcctcctcgcgctctgcctcgcgctcgccgccgcgtgcctggcctacctctactaccacccgcgcccgccgtcgttccaccttcagccgctcgccgccacgcggttccgcgtcgggaactcctcggcggtgtccgccatggacgtcaccgccgccgtcagggtggtgtcgtggaaccccaacgaccgggtgtcgttcgagtacggcgacggggagggccgcgtggcgctcgccgacgccgacggcgacgtcgcgctgggctgggcgcccgtggccgggttccgccacgcgccgcggagcgtggcgacggtggcgttcgtggcggcggcgaagggggtggtggtcgacgaggccgtggcggcgcgcgtccgcgaccggtaccggcggcggcagctggcgttcaaggtggtggtggacacgcacgtcggcgcgcgcgccggcgcggtgcgcaccggcatggtgcccgtgaggctgctgtgcgacggcggcgccatggcgccgcgcggcggcgtgtccgggagcgtggtggggcccatgagcaagtgccaggtctacctcttcagagtcagatggtcagtgacttcactcttcaactctccgtctctcccttgtgtttgtttctctacctgcattgttgcttcatcgctcatccaagtttttattacaacttgtattctcacgtatcaaccgacaaccataacaatatacatgaatacgtccacaggtacaattttttttttcaaaaacgcatgaacatagaaaagcatgagaattataagaattaagtagcgtaccaaggcttggtttagttcccaactttttcttcagcttccaacttttccatcacattcaaactttcctacacacgtaagtttctaacttttttctttaaacttctaattttggcgtgaaactaaacacagcccaacttgaatcgtaggcaattccaaaacgcacaaatctttcgagttgttatgaagcctcaaagaaaaatattaactgcaagatttgggagtgacaaagttaatttcaagcagttgaacgtcgtgttagaaatcgtccaaaattctgatggtgtttaggtaattcaatgggattcctattagttcatttctttgttcgaaatgaccacatgagaaaatttcccatatactaattcgtatcctatgaaattctttaaaaatcctaaattccaaataaacctctgaattcttctcactaccctcagttactgtgattttcctgtcatttactcatttacattaacattggttgtctctctcaatttacagaaccaattttgctttgccccattttctcatctctcccttgccacatcatcaatatcaccaactcttgttgtctgatgaaagctacttcttctgcataacacccatgaactaaatcctgcatacctctgctcattaaaaccgctgccattgttgctacacacatgaatgtacaaaacaacaacatccccaaattcaattttggcatcgcaaatctgtcttggtcccatctgatctgacacacccagcccaagaaccatccacacaaacccaagagactactcctaccaaagatcacaaggaaagattccaagaggtcaatatgagaattagaattaggacacaagggcatatgttggcagtacggccatgagatgtcattgtcctgtatatatatgagagagagagagaaatggggggccctcagtaattaaggtagcaaagactacacattttgtgccgcacaagatgccgcaggaggtcactggctgctacagtgggatcaggtagatccgtggattatacaacggtgacgccgcatctgctgcctgattatcagtgagtggccgggacgcctgtgtctccggccaaaagcgtccccccccccccccccccggattctctctgtccctatgcttacctcgcacgcatccaagcgcagtccatgaccgcgaaaaaaaagaaaagaatcatccaaatagtcgtgaaaaattctgaaaatgatctcgattgcgtgtttgttctccgtggagtaaggaatttcactcgtaagacgagtgttgttttcggtaatattcaaatagttatgaaaaaaaaaatcagagaggataacatattaccatataagcttagtttttgtgtagtaagaaattttgctcctaagtaagtcgagttgcgcaattcggattcgggtactaaactggggaggagggggggggggtggagctcaggtgttgagctgtacatcgacggatgttagcgtgtcactgttgctccaacttgctgtcctccagggtggtgtgccagaattttgacaaatcacaagtggagatcccacttgggttgtgtcatggtagctaccatgtaatactacaagaggacaccagattttgccaaatgacacaagctttggtggaggagtgggggtagcatatatattcaggcatttagggacattggatcctagatgagaggaacatgcatgattggtactactactggctagcaaaggaccagtgtctaattaaggctagtacctacctagagtggcttagaagctgtgtgatcagggacacttagtgacaggacaaggttgttggtttcagcaaaatgttctgaaggagatcaggaaattccagtgaaaaaggttttactttgaggcaattttagctgcaataatgcaggtttcttatcaggcttccataggcaaaggttcaaaagtatgtatcaatttcttttttcttctgacactataatttgatccaaactgttgatggcttgcttagggaagtggtatggcataccagctaaatgttgaaaatacatgaaaaccagggtgtagaagtgaaggagacttctgttcaacacagtaccaaacaaatatctgaatttgcattccaagcatgcataattcattatctgaaaaaatagagtaaattccttgtgtgtgcccctgaaaagttattcaatcccttacatgcccctgaaacttactcgattccttctatacccttgaatttttgattggatcccctacatacccctaccgttagattgagcagcattccctggttagtttggttgaaaatgtctataatacccttgaggttggaggagctgaaaactaagaacatgtttggcagctgggtttgaaacattcatgattgcacagtatgtattccatgaggctaaaaaattagtgcataaaattaatttcattttcttttgttatagcattcagtattttataaaaaaatataacatgatattggatctttcatgaccactaaccgacacagcctgggggtaaaagacagtacccctagccgtttactcaaacaccattgcaattcatcagcatatcaagaggatcggtagcaccatttaataggaagaaaatgaaaatacatctaaaagcattcatacaccatcagcagtacacaaatatattactttttacatcatgagcataatggcacaagcccataacagttcaaggcatccgcctgcataaagtcaaacaaatcaatcaagaaacactagcagcagcagctattcgcattttgctaatcaacgcaagggcgtatcattaccgacggcgaggagcagcggagcaaggaggtaataggccggcgtcggagcccccgagaagagggtgaggtgacaagagggagggcgcggaggaggcagggaggagatggcgtcgccatgaccgcaagcagagtcgaggccgcggcgggatgcggactcgtcgccgcggcgggatgcaaagccgccgccgcccaccagatgcggaccccgccgcgccactgatgggatgcggacctagccgccgccgctgaccgcaagcagagccgagaccgcggcgggatgcagagccgttgccgccgccgggatgtgggagaagggcggcgatgcgcgtgcaacgatggctgaaagctggcgatgtgcggcaccgtgcgtgtgggaactatactattttggaggatttggggatcggatgtggccctgtgttacctagggttgacaggggcattttcgcattttatgaaaatactgacaagctaacacacacatgaacacaaacatctgacggaacccaaacggtaggggtatgtaggggatccaatcgaaaattcgggggtatagaaggaattgagtaagttccaggggcatgtaagggattgggtaacttttcaggggcacacaaggaatttactcgaaaaagaaaaaatagggcatattgcataatttcattttcttttttgtacattgtgtcttgattgtatgaaatgagaaatatatcttgctcatcttgtatccatggcaatatggcatttcaaacagattaaaccatgtgaaaattgggctatgcaattgcttcaagtaattgaactggactttctacgataaaatcattttcaggtttagcttgaactga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0261000, RefSeq:Os02g0261000