Os02g0273100

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0273100| Description = Aminotransferase, class IV family protein| Version = NM_001053066.1 GI:115445502 GeneID:4328992| Length = 4307 bp| ...")
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Gene Name

Os02g0273100

Description

Aminotransferase, class IV family protein

Version

NM_001053066.1 GI:115445502 GeneID:4328992

Length

4307 bp

Definition

Oryza sativa Japonica Group Os02g0273100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9979652..9983958

Sequence Coding Region

9980186..9980280,9980430..9981103,9981302..9981480,9982478..9982533,9983720..9983885

Expression

GEO Profiles:Os02g0273100

Genome Context

<gbrowseImage1> name=NC_008395:9979652..9983958 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9979652..9983958 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcctctctctccaccccacctgctaccgccggcgtctccccgtcgccccgcccttccctcctcgcgtacaagaaggctgctgggctcaccccatctccatggtgcgggtggaggagggcggcggtggccaccgcagccacgagctccaatcggaccgctgcaccagccgagaccattgtcactggaaatgatgtccctctcttgtcttttgctgaggttgcagaaaggcttgatgaattccatgcatctggaaccagaaatcaaaattacatggccatgtactctagtatttttggtggaattaccacaaatccttctgcaatggtgataccaatcgatgatcacatggtccacagaggacatggtgtttttgatactgcagctattatgaatgggcacctctatgagttagagcagcatcttgaccgcttcctgaagtctgcatcaatggccaaaatcacgctgccttttgatcggtcaacaattcggagcatacttattcaaactgtgagtgcatcaaaatgcacccaaggatcactcaggtactggctatctgttggaccaggagacttccagctatcttcagctggttgtgcaaactcagccctgtatgctattgtcattgaaagtccatcgttaccagtaccagcaggatgcaaggtgatcacatcatcgataccgataaaatctcaacagtttgcggtcatgaaaagtgtaaactacctgccaaatgcactcactaaagtggaaggcgaagaaaatggtggattcaccggcatatggttggatgatgagggtttcgtagcagagggttccaacatgaatgttggcttcgtgacacaaagcaaggagctcctcatgccccgtttcgacaagatccttagcgggtgcacggcaaaacgggttctgacccttgccaagcagctagtggcagatggaaggctcagcgggatcagttcaaggaatgtgagtgtccaggaagggaaggcggctgatgagatgatgctcattggtagtggtattcttgtcaaacctgttgttcagtgggatgatcagataattggctcaggcaaagaaggcccaattgctcagatgcttttcaacctcattcttgaggacatgagatccggtccaccttcagtccgcatccctgtctcctattga</cdnaseq>

Protein Sequence

<aaseq>MMASLSTPPATAGVSPSPRPSLLAYKKAAGLTPSPWCGWRRAAV ATAATSSNRTAAPAETIVTGNDVPLLSFAEVAERLDEFHASGTRNQNYMAMYSSIFGG ITTNPSAMVIPIDDHMVHRGHGVFDTAAIMNGHLYELEQHLDRFLKSASMAKITLPFD RSTIRSILIQTVSASKCTQGSLRYWLSVGPGDFQLSSAGCANSALYAIVIESPSLPVP AGCKVITSSIPIKSQQFAVMKSVNYLPNALTKVEGEENGGFTGIWLDDEGFVAEGSNM NVGFVTQSKELLMPRFDKILSGCTAKRVLTLAKQLVADGRLSGISSRNVSVQEGKAAD EMMLIGSGILVKPVVQWDDQIIGSGKEGPIAQMLFNLILEDMRSGPPSVRIPVSY</aaseq>

Gene Sequence

<dnaseqindica>3679..3773#2856..3529#2479..2657#1426..1481#74..239#agtataatgccggcagcatctgaaacctgagactagagtctgtccattcctgcagttttgcccgtgtgtcctgatgatggcctctctctccaccccacctgctaccgccggcgtctccccgtcgccccgcccttccctcctcgcgtacaagaaggctgctgggctcaccccatctccatggtgcgggtggaggagggcggcggtggccaccgcagccacgagctccaatcggaccgctggttagtcttcctccttgggttctgctcgaattcgcgggttgggttctagtgctgatcgggttcttgcgcctgccatctcctaccttaggttggagccaaagagatggaaacttttttttgttctaaatccttctatcagttctgaattctgaggctaaaggttgcactcccgcttgttccagctcctcagtttgcagcttcaggttcaggataatggaggaatggatataagtgcggtacttgcattctgcattcttgttggtgcgggtcccagttcggattggggtactaagattttgcataagttcgaaaagtatcctagtgattccaggagatcatgcagtagttctgtcatgcagtctgctcttcaaatttgcatgtctgttcatagttgttcatagctctgtcaaatctgcatgcttgttcatagttctgtcaaacttgcatgtgtgttcataggttgatgaactgaactctatatggagtggtgggggaatgtggatattttttttccctggtataggtcttctgtgagcaactgcttttgaattttttagtaataacagtgaacttccaaggctggaaaggtattttggttgcgttctgagttctcatgctgatgaaattccgtggttggtttagtgacccgatctgatgatgatccttagagttgggctgatgcaatgcgaggacagtttcgttagtaaaaaactgcaatttgtagttcacaagattgtaacagtttgtcatggttccctgtcgctttcttagtggtctggatgtgcttgaaatagttggatatatgcaaaatgggctgatgtgaatatgaaagatcgtatctttatgattaaatatgaggtatgccctttgatgttgactttaaggttgctgccagggtgcttttttctttctttcttttttgttttagctagttttgaaagcaattcttggcatttgttgatagaatttttttgataggaaaatacctgtacatttttttgttaaaatatgattttcaaaaccttaaatgagccttgcatggttgtttttctcaccttaatgattcctcggtttagctctgatatcattgctttgttcttcatatagtgtgcttctaggagactatgatgccttttgttttcaataatgtttttcatgcaactaaacggtattcttttcactgcagcaccagccgagaccattgtcactggaaatgatgtccctctcttgtcttttgctgaggtggacttccttgtcttttctgtgtttgttggcaccactttcaataccatcttcgcacaatatttgcaagaagaagttggattctccttttgttttagagagatcgtcttgttctgattaccattcctcttgtcttaattaatcttcacttgactgatacctgattatctacctcatatagtacattgttatcatccactcaatttacatccatactagtatgtattaagattttttagaaccattttgctgcaaccacagtatgattagagcagcccaacgtttcaaaacactgtttcctctaggctttttttaagttgactacggtttaacagtccacagtagtgtgcaaatacatttgtggattacattgctgactttttattcaagagcaaaaacaacatatcacccttatatggagaatcggataaaaaaatttggagtaatcttcttttttgttgtaaatatatttgtatctttttaataatcatgtaccaaagtaggactactgttttccctaaaaagaagttaactctgtatattttctagcatcatttatattgctacaggtaagaatgtccaacaagtcctagttgaagccatgtcctagtagttgacatgagggtggtaactggtgacaacctttgagtatttgtttagtaactttgatcttgcagtttaacacaatcggatttgataggactctgaataacttaaattatgcaccaaaacactgataatctgaattgagccctttaacaagttccatctttggatatagttccagtcatgctgattactgtgtttcctatctctttgaagtattaattacaagtattactagttttcagagagaaggggtattcataacagtatgtggtttactatctgtctaagaggtgctcacgattcatgaaattatcaagcagagtaggatcttgtcttgaaaagtgctatgacaacagatatgtaaagtcaaaaactttttctcttataggttgcagaaaggcttgatgaattccatgcatctggaaccagaaatcaaaattacatggccatgtactctagtatttttggtggaattaccacaaatccttctgcaatggtgataccaatcgatgatcacatggtccacagaggacatggtgtttttgatactgcagctattatgaatgggtgagatctttgcttcaatcaattatgccaacccccaaaaaaacagatacttgactatcaataggaaatttgttttgtttttttagtgtgtggaaaattgtaagtgaacaagaagggatcattctttttactaaatttccattcagttctgatccaaacaccatattatcagtattaactttgtcatattactgtcaggcacctctatgagttagagcagcatcttgaccgcttcctgaagtctgcatcaatggccaaaatcacgctgccttttgatcggtcaacaattcggagcatacttattcaaactgtgagtgcatcaaaatgcacccaaggatcactcaggtactggctatctgttggaccaggagacttccagctatcttcagctggttgtgcaaactcagccctgtatgctattgtcattgaaagtccatcgttaccagtaccagcaggatgcaaggtgatcacatcatcgataccgataaaatctcaacagtttgcggtcatgaaaagtgtaaactacctgccaaatgcactcactaaagtggaaggcgaagaaaatggtggattcaccggcatatggttggatgatgagggtttcgtagcagagggttccaacatgaatgttggcttcgtgacacaaagcaaggagctcctcatgccccgtttcgacaagatccttagcgggtgcacggcaaaacgggttctgacccttgccaagcagctagtggcagatggaaggctcagcgggatcagttcaaggaatgtgagtgtccaggaagggaaggcggctgatgagatgatgctcattggtagtggtattcttgtcaaacctgttgttcagtgggatgatcagataattggctcaggtaaacagaatttcacccctgaaattcacctagctgtcgttgtttggaagagtatcattttgcactctgcaacagaaagtggatggcttttagcccttcaatggcttcctgtaaacttcatgctaatttctttccttgttctaacacaggcaaagaaggcccaattgctcagatgcttttcaacctcattcttgaggacatgagatccggtccaccttcagtccgcatccctgtctcctattgaaactgctgacatctcaccgatctttctacagatatgtgataaataacagaacatgtattattaggaacaaggaacgattactagaattctgagactagtcacgtaaagctacactctatatttgcataattcagaaggtgtgttcttcagttgcaaccttgtgctctcagacatcttaatcctgaatttaaagctttgctatccagatgctacaccaagcaaggggggcaaggattttggtagctgttgatcaatgtagagaagatgtggatattgtacaaagaaacctgtgaaactgttaaatttgtacaggttttattatgtcttgagtacctcatactgcagcacagactcacagaggatggcttgcaagccacagattgccagaaccttgagctcaagccaccgaactaagtcagtttattatgttttacctttattcagaaggaatagttccgattcagcaacatcaacttgattcagagctactgcttctttctttggtaagctatggctttgtatttgattaatctt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0273100, RefSeq:Os02g0273100