Os02g0276200

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0276200| Description = Isochorismatase hydrolase family protein| Version = NM_001053078.2 GI:297598999 GeneID:4329005| Length = 8643 bp| D...")
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Gene Name

Os02g0276200

Description

Isochorismatase hydrolase family protein

Version

NM_001053078.2 GI:297598999 GeneID:4329005

Length

8643 bp

Definition

Oryza sativa Japonica Group Os02g0276200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10164283..10172925

Sequence Coding Region

10168687..10168941,10172226..10172348

Expression

GEO Profiles:Os02g0276200

Genome Context

<gbrowseImage1> name=NC_008395:10164283..10172925 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10164283..10172925 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagaaggatttcgtggatccggcgacaagcagcgccgcgctattggccggtgaggccattctacccactgtcaccgcagcagtcgccgtcgcgaggcagcgtggtatcttcatcgtctgggtggtcagagagcatgacccttctgggagagacgttgaactttttcgcaggcacttctattctagtggcaagggcctaggggtggaaggttccaaaggtgctgagctcgctgatgggcttactatcaaagatggggattacaagttggtgaagactaggttcagtgctttctttgcaacgcaccttgattctgtcctcaagacctctggaataaagaacttggttattgttggtaagcacaaaatatatatttaa</cdnaseq>

Protein Sequence

<aaseq>MQKDFVDPATSSAALLAGEAILPTVTAAVAVARQRGIFIVWVVR EHDPSGRDVELFRRHFYSSGKGLGVEGSKGAELADGLTIKDGDYKLVKTRFSAFFATH LDSVLKTSGIKNLVIVGKHKIYI</aaseq>

Gene Sequence

<dnaseqindica>3985..4239#578..700#tgctgctatacctatagaaatgctcctctccaaccataaaaaggacccagccagtgctgccattttcttctctccatgatcaggcagtgctatatatgctagctagtacacacagtcacacactacatcgcaagaggattaatataatcccgatcgagtagatcgagctgtccggccgtgcgaatcttggtgatatccatggcgccggtggccggctccggcgacgagtggagtgagacggccatgctcgtcatcgatatgcaggtatatatacacctactcacgcgatcaagggtatacatgtcaattagctgatattactattgtggaattacaacatggtgtgtgaaaagacgggttaatagttttaagtggggttcaatttttctgtccatttttttctcggtttgccagttttgggggtgtaccgtttttggtagaatggttcttttttcctaatagagacacggagagaagctaggatggctgcactttgataataatagtagagagatatgtcatatgctatgcggttgaaatctaatggtttttctgctcgagttgcattggtggtttaatgcagaaggatttcgtggatccggcgacaagcagcgccgcgctattggccggtgaggccattctacccactgtcaccgcagcagtcgccgtcgcgaggcagcgtggtatcttcatcgtctgggttagtccctctaacttgggattgagtctagcatgtagcatatggtgggtgattattaccgtaccactcaaaaaatttaacaggtccttccttagaatctcgtgggaagctagctgctattctcagataatagcctacatatagtttatttttcttaacaagcttatacatattattgaacaatttgatcagtttgagatagatcgtggattttaggactagctaaagaaggtagggaccttaattacgagtttcctcaaacatgcccttattttttagctagccgtcactagcgctataaatttgcattgctagagctgggtagcctatgcttacttgagtgtgatgtgtattatatatttgtagttttagaaaataaatgtttaaaaaacaaatctcttgtgggcatcaatacaaatataacacaaatatatgaagcaattgactttttttcttaaactttaagcaacatatttattaaattgttcagttaagtgaagtaaaaaagaatatcactagatccatcatcgaaagtactttaagcatgccagcagcatgtttgtatgtttgcacgcatagaaatgcattgtttattaaccgatgggttttattaattatgagctaccacatgttgcatgtttttattgaacttgagcaagccgtgtattttaacttaatgtacacatattgttacaattgtataccaatattatcgtccttcatatgcatctcattttcccccctatgatttatagttgtggtggttgaatgatttatcagttatatgtaacaagctatactgatcgttttataaatccaatccaagaggaatcttataccatgttaaaatttagttcactctcccaaaaaggtcttatgacacactataagaaaaccattttctcagatgaggtatttttttcaggcgggtaggcctctcggagccaaatgcctgtctacgaaaatagcaacagggagcgagaccgtcgtccgcttgcgaagattgatttttcaggcggacgacataaggtgccgcctgcgattatcacaggcaaacgtctaatgtggtctgcctgcaaaaatcatacctgcagctccaaccagaggagtagtgtctaagaaccattcttatcctctccatcactcatttccctccccctcctctctgtctctcacacgcgctacttcacgcatcggcggctccaaccagaggagtagtgtcggcggcggtttcgaggaggagcgcctggggtaggggcggcgtcagcgacggctccgacgagtggcgtcggctgcggctctgacgaggaggagcgggcagtggcggcagctccgaggaggaatagtcttggcgagggtctcgacgacgaggagcggtgtcggcggcgggaggagcggctggggcggctgctccgatgagcggcaggagtgacagtggttcattagatgggaaggggcggtggcggcggtgtggcgccgggcaactggcgacggcggcagcacggtcggatgggggatttttttttgttcacggagtatattttggcaggtaggtggttataccgcctgcagatttcgcaggcggagctgatgcccgcttgtaaaaatcgtatatttttgtaggcctttacttgcatgtggggtggatggctacctagaaaaatccattttgtctgcttgcaaaaatctattttctataactagtgtgaaactagaactagattatatgttcttgtgccaactaccaaaaggtcatctcgttcatttcagaattactatctccttcgcatagcataatataatgattggaatattaatcgaattttatgccaaatataagggattgagtagtcctacttttccctccaaaaacaactccaaatttagggcatttcgaaatgcataatttaaaaaacggaggaatagaaaaaacattgggttttgataagaatagaagtgtaaatcagagaattacaaaataccgaaaatacataggaattgtcatttggttaggcaggaagaaaaacacaggattcagataagaaagatagactcaaagaaaatttttcaagtggttggagcttttctaaagtttcctctaaaatttgcatacaattagccattccatagaaatttcataagatttaagctcaactcctttgtatatatcaaatagaaaaatttcctataggatttgaatcctgtgaaaattttcacaaatcctttgattataaggtgacctaaatttgtccccaccttattacctccacctatccaaccattcccaacacactactcaactaatgaggggcgtcatattatttttttcctttctccaatgcatctctaaaaccgtcctctgcaaagtcgcttctgaacttgctcgaatcagaacaaccattatttgggtttgcaacacttatcaacagttcagcttcagatggtggttaattcctcagtttgttcacttttcagccaccagttcaagtcacagagaggccataggctgccaccatacatctatctgcttgattgcctcccttttggatcttctgatctacatgttacaagaaactaagggagaaaacagacaaaaatgaacatgtttagcagtgaccactgagctaggaaacatgtatcagatgacagacaaaaccaaaccacatgaagaacagttaaacgaaagggacaggagaacaacatgttgcacttgtgtcatcacaaaaagaaaaaaaaaaaggttgcaatcaacaatgaaagggagatgacaatgcacttcttattaattccataaaaaaaaggctgaactcatgcacacacaacctggggataagattcaaaattggagagagaataaataaagcaaaagaggagaagcaccgtgccaaaaggtagggaaagatgtataacaaaaaaaacatttacagaaggcatattggaatatgacaaatagcagggagaatgacacatgtggagctcaccaccttttttttaagttgattagattgccaattaaatattccatagaccaaaattgtccgatttagatgaagggatgtagatcaaatgtcatgtaaagtttgtctggtttagaagtttaaagaattatagttgatttttgccttcagcaaaagtacaaggtgtgaaataacctctgtttccttttccttgtatacattatgctctataaattaggggctctaaagttctcattttgagatgctgccatgccatgaatgttggactgatgaactgattgatgaagatgaactgcatatatgcaggtggtcagagagcatgacccttctgggagagacgttgaactttttcgcaggcacttctattctagtggcaagggcctaggggtggaaggttccaaaggtgctgagctcgctgatgggcttactatcaaagatggggattacaagttggtgaagactaggttcagtgctttctttgcaacgcaccttgattctgtcctcaagacctctggaataaagaacttggttattgttggtaagcacaaaatatatatttaatcaagctatgattttgtaatttgcggtcatttgtcctgcaacctataataattggctgtagcaaaggccagaaataaattctattattaaaatatatatatacacatatgtatccatgggaaaaccatatcttgaacaaatcatatatcataccttgcatttcttttgtgcttgagagttcagtacttcagtaccacattgcacatcactaacgttacagcttatatatttattaatttgcttttgaatttcaggggttcaaacaccaaattgcattcgacagacagtctttgatgctgtagcactggactacgacaaagttgctgtcattattgatgcaacagctgctgctaagccggagatccatttatgtaagtacacttttcacacttcaccttctatgtatctgtcacgtccaaaaatttagccaaatttatagattattttgtttctaatcaaatcagggtacataaaatgacaaattaatataaagatccaaacgtaaataaaatataaatacttacaaaagacacttagtgatccttacaccgaaaagaaagtagcagcaacgaaaaaaatgcgatcctagcgaggcttcagctccactccataggtaaaactcaactagggtataagcctttatcctctaactccgtcttcaactcaggagcactacgcttctacaaaagttgaaataatagcgagactgagtacaaccatcgtacttagcaagcacgcaccaatgatgcaggcgtgcatagggagacaaagaggggtttgcggcaatttacatagaggcggttgtaaacattttataactagtctaaaacagtaaaatagttgattaattaaggcaagattaaatgtccacggaacaacactacaccatgttgaacaggcccaaccaaaccacctaaactacaccagttcattatgtcaagttattaataatgtgggactaatcacggtgaatctggttgatcgaccataaccacaaacacggctattcgaatagttttacgctagccagaggtgcacaactgtacacacaatacacaatccatcggcatgtcaccgtgtccggccaaacacgtaaacatgtcgagtgattgtgacaaaacgcttcgcataactccccctgaccatgcgcaccacaccgcaggttttgcccccacctttaaaacaaaggtgggcaaccccctcgtgactaggtgaatccggaagccacataggccatcgcagggcccatccaaactccaccacacccatccttgcctgggaatgtcggaaaggggaaagttatacaagtccagcagttacccattcttgcttgtggtaagcgcggtaagtattccaatgtttccgtgaaccggtccttatttgccatgggtgtgaccagcaaaaccatgcacccaatttttaatcccaaacggaaattggggcatgacaataactttcaaaaccaaaacatctcacgacaatagaacgaatcatccataatggattggaaccctcatcattgcggcaaagtgtgtgtggtcactgttaagtgatcaataatgtgaaaaacctctctatgacgggcgagtagccattactgatgatagatttctttatcgggcccaacttccacccatcaccgataaggttttcctaaaacgccacacttctaaaagcccatcacgaatgtgtcatcaatgacgggcttcaactttcacccaacaaaagtgacggttgtcacctttgatggggtgttttagcgcccgttacggatgaccatttgtggaagcttggaaattacacacgggaaaaatgtgtatctcatcgataactcctttcttttgcgacccaacacagacgagatttttcacaagaaaataaatttgttttattggctagccttagacaaatgctacccacgcccgcacgtccagtgctagcaccatatgcctcacacaaagcccacatgtgccatatgcccacaaactgacccatacgcgcaaccgcgagggtcggctcagatatcatttataacagtctgtcctccagaaaacgcagcccagcccaaccgacaggctggcctacttacatagaccatctcatttacactttcgtactcgcttcatgtaaaatagttaacccagaagtgatatggttagaggaacaaagtcttataagtttgttacaacattgctaaagtagtaaggtggtactaaacatgcgcacacagctctcatgtgccacataggccaaatcctaattaggccaggatgtcacacggcaattagagtatgccaatttcattgaatgtaagagtaaaaggtattgtgagaatagttcaaagaaaaaaaaagtaaagctaagggataagctctaaaagtcgttttgcttctggtagagtctaagttttggcctcctcaactttcgccactagggctatcgcagaaagttctctgtgttgggacattttttggtttctcctttcaatatttcaagccattagtagcatgatggtgcaaactccttttttcggtcgccccttgcttgcagtcagcatcgtccaccactcatgaactattgaagctatgctccatattgtcggtttgatttgctcgagcaagatccatgttgatagcatgtcccatattccctctgtatatctacattttgctaggaagttggagggtgtctttgggtgtgccgatagagtgagtagtaggtactgtttggtcagccataggttgctagtctatcagacatccacattcgctacaccatgacctgaaagctacaatagctcatctgtcggtaaagaccacctattgccaaggaaagatcttgcatttcttcggcgcttagggcatcgagataatcatcttgtaattcgtgttgatggagccaaagaactacactttgtaagtggatactgccatgtgttctccatgtcttatgagctttcaagtgattccatcctgttcgtcgttaaggaaatgtacttcttgcattgtgttctgtagggggttgacatcttgtatcacatgtcctgttcaatggccttcttcaatgttccattttttctggagatagtgtagagtctcagcgcaacatcctttgggcgcaaaccatgcaagctagatagttgtgcccactcaaagtttttggtgacaaatgagttgcctacaattggaaattgttaacctcatttcaaggtgttacatgaggagaaattgaagtcccacaaaacatggtaaaccctatttaacacaaataaagacatatttcaaaaggaaggaattcaacacacatttgcaagaacttgttaattgacttcatgacatgtgtgtacatatgtgtgtgtcatattttggcatgcatggcttctaaattgcaagtatacataaattgttttttaaaaaggaaaaagttcatttactcccccgaactatttcaccggaatgctaaactattttgcttattttacacctccgaattattgaaaatggttcagtttacgcccaacactatttctccttttcattctctttatataactcatattttcactgaaagtttgatatgatgatatatgcattacaatttacatctcaacatttttttgtagattttttctcactgtttacgtaggctggaacacatctaaaaccaatcgaaacatcaatattataaagttcaagcaaatatttatgaaaaaaattaaaaatatttttgaatttagatatgaattcatctatggctccaaaattttcagcttagaatacaacttgtataaaatgtaacataaaagagagaaatattagagtaaagtgaacctttttcaatagtttaaagtgcaaaatgtgaaaaaaaaaagtttaaggggttaagtgatccaatggattagtttgggggagtaaatggacttcttttttcttttcataatgggccatcattgaggcccatccaaacaaggccttaacggataggatttattttaagtgtaaatataactgaaactggaccttgtgtacatgtgttgattatgtactctctgattaattacttagtaattgagcactactttatgttaaacagcaaacatgatagatatgaagaatatcggagtggaaacaccaaccttggaggaatggagacgttgaacttgctgttacgtactgctcatgttattacaggaaacttgctacatatatacgcaagaccaccaccttcctggatgcatcatcagcaacagcgactggacctccatattgttacttgtttaaattacctccatatgcgtcattataattatatatatatgaaccttgtataactgtgtttaatgtggtgagtactaaatgtggttatatatatatatatatatataaaataagtgattccctcgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0276200, RefSeq:Os02g0276200