Os02g0282900

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Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0282900| Description = Similar to 68 kDa protein HP68| Version = NM_001053102.1 GI:115445574 GeneID:4329031| Length = 6444 bp| Definition ...")
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Gene Name

Os02g0282900

Description

Similar to 68 kDa protein HP68

Version

NM_001053102.1 GI:115445574 GeneID:4329031

Length

6444 bp

Definition

Oryza sativa Japonica Group Os02g0282900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10581436..10587879

Sequence Coding Region

10582247..10582366,10582583..10582828,10583766..10584035,10584131..10584313,10584393..10584588
,10584675..10584979,10585415..10585504,10585589..10585706,10585891..10585988
,10586087..10586172,10587522..10587636

Expression

GEO Profiles:Os02g0282900

Genome Context

<gbrowseImage1> name=NC_008395:10581436..10587879 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10581436..10587879 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcgtcgtcggggaggtcgagccggatcgcggtggtgacggaggaccggtgccggcccagcaagtgcggccagcagtgccgcaagcgctgccccgtcaatgccaccgggcgtcagtgcatagaagttactccatcatcgagagtatccttaatttctgaggaactatgtattggatgtggtatttgtgtgaaggtatgtccctttgatgctatccagattataaacttgccaagtgatcttgacaaggagacgacacatcgctatggaccaaattcatttaagcttcacaggctgcctgttccaagaccagggcaagtgttgggcttggtagggacaaatggtattggtaaatcaacggcacttaaaattttggcagggaaggtgaaacccaacttgggtaaattcacagatcccccaaattgggatgaaattatgaggaatttccgtggatctgaactccagaaatactttactcgtctgctggaagacaaaatgaaggcaactatgaaaccacaataccttgatcacattcctaaatctgttacagggaaggttggagatcttcttagcaagaaagatgagagacatatgaaaaacctactgtgtgatactctcgagttgaatcaagttcttgaccgagatgtctcagctctatctggtggtgaactccagagatttgcaatagctgcccgtgctatggaagaagcagatgtttatatgtttgatgagccatcctgctatcttgatgtgaagcaaaggctgaaagctgcacaagttattcgctctttgcttcagcccaaaaactatgtaattgttgtggagcatgatcttagcatactggactacctatcagactatatatgctgtctttatgggactcctggagcatatggtgttgttactttgccctcttctgttagagaaggaatcaacattttcctggatggctttataccaacagaaaacctacgtttccgcgaggagaaacttacatttagagttaccgagtctactgaggaaatcgtagagggtcagacataccaatgctaccgatatcctacaatgacaaagacaaggtgtggctttaagctatcagtcactgaaggcagctttaatgattcccagataattgtaatgcttggtgagaatggtactgggaagacgacatttatccgtatgctggcaggacgagtgaagccagacaaagtaggagacgaagaagttgacgtgcctgaatacactgtctcatacaagcctcaggaattgatatctaaatatagctctacagtgagggatcttctattcgagaaagtacctggatcatgcactcaagcccagttcagatctgatgtcatgaaaccactgaaaattgagcaactcatggacaggcaggttccaactctttctggaggggagctgcaaagggttgcgctttgtctttgtcttgggaagcctgctgatatttacctcatagatgaaccaagtgcccatcttgattcagagcagcgccttcttgcagcgaaggtcataaaaagatttatcctccatgaaaagaaaactgcttttgttgttgagcatgattttatcatggcaacctaccttgctgataaggtggtggtttttgagggaaaaccttctgttgactgtattgcaaatgcaccagaacccctggcctctgggatgaaccgttttctttcgcatcttgatgtcacatttaggaaagatcctacaacctacaggcctaggatcaacaagctaggctctataaaggatgctgagcagaaagctgcaggatgttactactaccttgagtattaa</cdnaseq>

Protein Sequence

<aaseq>MSSSSSGRSSRIAVVTEDRCRPSKCGQQCRKRCPVNATGRQCIE VTPSSRVSLISEELCIGCGICVKVCPFDAIQIINLPSDLDKETTHRYGPNSFKLHRLP VPRPGQVLGLVGTNGIGKSTALKILAGKVKPNLGKFTDPPNWDEIMRNFRGSELQKYF TRLLEDKMKATMKPQYLDHIPKSVTGKVGDLLSKKDERHMKNLLCDTLELNQVLDRDV SALSGGELQRFAIAARAMEEADVYMFDEPSCYLDVKQRLKAAQVIRSLLQPKNYVIVV EHDLSILDYLSDYICCLYGTPGAYGVVTLPSSVREGINIFLDGFIPTENLRFREEKLT FRVTESTEEIVEGQTYQCYRYPTMTKTRCGFKLSVTEGSFNDSQIIVMLGENGTGKTT FIRMLAGRVKPDKVGDEEVDVPEYTVSYKPQELISKYSSTVRDLLFEKVPGSCTQAQF RSDVMKPLKIEQLMDRQVPTLSGGELQRVALCLCLGKPADIYLIDEPSAHLDSEQRLL AAKVIKRFILHEKKTAFVVEHDFIMATYLADKVVVFEGKPSVDCIANAPEPLASGMNR FLSHLDVTFRKDPTTYRPRINKLGSIKDAEQKAAGCYYYLEY</aaseq>

Gene Sequence

<dnaseqindica>5514..5633#5052..5297#3845..4114#3567..3749#3292..3487#2901..3205#2376..2465#2174..2291#1892..1989#1708..1793#244..358#aaacaacacacgcgacgcgacacggtcgctagtgcggcgcggcccaccaaggcaccaacacgtaaggcaacacaagacaaaccaaacaaacacaagagagtagtagtttttttacttttagggctctcccagatttcctctccttcctcgcgccgcggcgatcgatcgatcggtttccggctagcttccgaaccgggcaaaaatccccaaatcgatccgccgcgagaggagaggcgggcggcgatgtcgtcgtcgtcgtcggggaggtcgagccggatcgcggtggtgacggaggaccggtgccggcccagcaagtgcggccagcagtgccgcaagcgctgccccgtcaatgccaccggtattatacatgtttgtttgtttttctgtgcttgtgccgccccgcgattattccaatccggtcttgttcatgatctttgccctggggttttgtgtagaggagcggcaattggtctagctgccctggggttttgggtagcggagcgggaatcgcgcttggttcccctttatggtctgcatttagtttcagtctagagcatattggcccagttgagggaaatagttttaaggatgcgaattacgtgtggccttttgaggaattaggatgaattgtttgcttgtaaaattgagattgcaatagttgtggtgttagccttgtatgtgaaaaacaagcccaaatgttatttaactgcttgtcctttcaccactactgagaatacgtaataggcgtcttacctattttgacaaaagtatcatatattatatttgtgtttatagaacaaatatggtgagacaacaatacacgcctgtgaagatagagtatcatatattatgtgtttacaaaacaaatgttgtaaaaacaaccatatgcgcgatcgatattacctgctaggctgctaactctgtccctttgttttgggatgtttggactaccctccagcgatgtgttaattctttaatctaaatgtgttggaacatctggaaagaatattccccccattttaaaatctaaacaaactaaagtagtaccagagacttcaccattatgaaattgtttggcaccgattatttcttgtaatatgcacgaatatatatttcaaagagtccaaatggcataagggatccccctctgttgcaatgccatattttctaatatctatctatattcatagatgaaatgagctttatttcattcaaatctgctcctacttcgtgccggtaataatatgctttgaattagtcatttcgcaaagacatcacacatgaatgaaagcagtgacatcctattacctgctcccaagagtaagtgggaactttcagaacaatgaaaatcttatttttcatgtgaacatgctgacctatatgtctactgaagttattggtttagttatgccttcgagtcacactttaatgtagttaattattttggtattcgatctttttgagataaattttgagtttctcagataaattcattcgtactctgtacactaggatttatcttttgttgttctatatccattaattttactgcatctgtacattttccttttgttgttctatatccattaattttactgcatatgtacattttcctttcagaccaaggaaaaaggctttttattttgttgatagagaagatacaagtatttgtgcatgtggcttatgattctttatctacattgacagggcgtcagtgcatagaagttactccatcatcgagagtatccttaatttctgaggaactatgtattggatgtggtatttgtgtgaaggtgtaactgcttttccgcttggccttcatttttttgtattttctttccaaatgtgcaatattcttagccttgcttcctttttgttattattatttcaggtatgtccctttgatgctatccagattataaacttgccaagtgatcttgacaaggagacgacacatcgctatggaccaaattcatttaagcttcacaggtacaaaatcctatttttaatactggccacctagctttctttgagctgtatttgatttttttaactttttacactattgtattagcttaatgttgtttccatgaaactattaccgatacacaatggtacgatgcttctcacacataactaccttcctgaaacttgatttgattttttttttaaggctgcctgttccaagaccagggcaagtgttgggcttggtagggacaaatggtattggtaaatcaacggcacttaaaattttggcagggaaggtgaaacccaacttgggtaaattcacagtaagcaacacagagcactatttgttatacgtacttgttaatggaagtaattgtaggttatgaaactttttattgtgtttgcaggatcccccaaattgggatgaaattatgaggaatttccgtggatctgaactccagaaatactttactcgtctgctggaagacaaaatgaaggtacattacagaatttatcagaaaatttcccctacagatgtaaaattacaatgttctgttttctggtgcatatatggttattacctgttccctcatttgacttatcgtttatcaatcatatatatttgactaagtttggaacgcgttagatggaatttgaatatagttggaatgcagatgtaatgtaactatttaggatatttcccttaaacatgttcagttctagaatttgtttcttagtcacatatcatccaaattattcattgctctgatgatcatggttcaagtatttaaatcatttcagttatccagaagctaaatactgacgtggaagatttaactgccttttaacttgctttatagttgtacttacatagtaatggtcagatttgttactgtgacacattctgtctaatgcgttctaattggttacaggcaactatgaaaccacaataccttgatcacattcctaaatctgttacagggaaggttggagatcttcttagcaagaaagatgagagacatatgaaaaacctactgtgtgatactctcgagttgaatcaagttcttgaccgagatgtctcagctctatctggtggtgaactccagagatttgcaatagctgcccgtgctatggaagaagcagatgtttatatgtttgatgagccatcctgctatcttgatgtgaagcaaaggctgaaagctgcacaagttattcgctctttgcttcagcccaaaaagtaagaagagtcccatttgaccaaatcagaacatttaaactgcacactttgcatttgacaagcaagttttcctttattttttgcagctatgtaattgttgtggagcatgatcttagcatactggactacctatcagactatatatgctgtctttatgggactcctggagcatatggtgttgttactttgccctcttctgttagagaaggaatcaacattttcctggatggctttataccaacagaaaacctacgtttccgcgaggagaaacttacatttagagtaagggctatgattatgagcaccataacttcaattcttatgtgttctgactctaatgcaatgctatttgcttccttaggttaccgagtctactgaggaaatcgtagagggtcagacataccaatgctaccgatatcctacaatgacaaagacaaggtgtggctttaagctatcagtcactgaaggcagctttaatgattcccagataattgtaatgcttggtgagaatggtactgggaagacgacatttatccgtatgctggtacacaccttatttttgtcaaatatattttgcagtaatacgaacatctctacttttgattataaccctcaagattgttcttatctgaatttcaggcaggacgagtgaagccagacaaagtaggagacgaagaagttgacgtgcctgaatacactgtctcatacaagcctcaggaattgatatctaaatatagctctacagtgagggatcttctattcgagaaagtacctggatcatgcactcaagcccagttcagatctgatgtcatgaaaccactgaaaattgagcaactcatggacaggcaggttccaactctttctggaggggagctgcaaagggttgcgctttgtctttgtcttgggaaggtaataactttggattaccccgctacagtctcttttcaaatcattgttgtgggtagaaaagttccttatgtattttaagcccttcagatgttagacaaaaataccttgtttgcattaacccaatgctttattttgagaagaaaccaggacctttatatctcaaaaattcatttaggctgtatagcgcttgtttctcaaggaaagaagatctgtgcactactacagactctgcaaaatcaactatctttcattcgctaaattctttttccacatcaatcatatctaagtgcttatgctgttccatatacttttgtggacgaaaattaattaatcacaccaacaataggagggcaagtttactttgctacttttatggtgaactttacagtatgttttaaactttgaagcatagactatgtgttgcactatttctgtgtcctcctgaccaaactctcccacaagcatcagtgatgagtttattattcatcaatatctctacaacttaggtgggaaaatagtttgacaatactgattcgcaatacctagaattgcatattatattttgtggattgttggtacatttttcttctccatttttccttcgaggaaactagatgagccataatagtatataattatattatttttaaacaacactgcagcatatttgtctaggctatgaagctgacacatatttctttaactattgtaagaacgttctcagcttttgacagcagattaaggagaaaagagaacaactaccagtacattctttctattaaacatgtttattgttaatgatgcatatagattgtaatttgaaccatgaatccctagttagaaaagtttatgctcaaggaatatagtctatataactattggtcatctcgacagtgcatcaataagtattgatttttacatggcatttggtttgcagcctgctgatatttacctcatagatgaaccaagtgcccatcttgattcagagcagcgccttcttgcagcgaaggtcataaaaagatttatcctccatgaaaagaaaactgcttttgttgttgagcatgattttatcatggcaacctaccttgctgataaggtggtggtttttgagggaaaaccttctgttgactgtattgcaaatgcaccagaacccctggcctctgggatgaaccgttttctttcggtaagttcaaattcctctttctactgcctcctgcgttatatcaagtgaggatagtggatagccctgaattttcatgcaaaggtttcctgaaaataacatggacacagtcagaatgttgcttttttagaggatcaagtgataagtactgaatatttccgacagataataagcattttaatggaaagtgcttgaatttactttctctgtgttcaacagcatcttgatgtcacatttaggaaagatcctacaacctacaggcctaggatcaacaagctaggctctataaaggatgctgagcagaaagctgcaggatgttactactaccttgagtattaacgtaagataaaattctccctttctctatgttagtcatctaacaacactgcaatagcatgtcgttcatgtacttttccttgtgttcacagaaagctttcgcaaggggcaactctacttctgcaaaagctccttcggagcagaacagctcggctcgcgttatcatgcacatacttgcacgcatacatgagtctgccagtgctctcggaatgtctttgcactgctttccaataagcaatatagtagatgctctttgatgtttaaattgacatgcagattggtcatctatctttacaggaatgttttggcacggcaccagggtatgccccggaacttcgtgggcaggatcgatttgaaatgacatctgaaatctaagcacaagcactatatatagcatgggaggtaagtttctactcatttgcattaggaactgcattaattgggataatttcaccaaatatcccctgctctctgtaggttgggttgatgaaattttatgaagatcggggtgaagctattgcctgaattggacggggtttgaacaagtgatcaaatcagggttgaattgtatttttgaagccgtcgagaaaatgcaagttgttatcgcagtctgcagttaaatgcacgtttcagtgacttcttattagtctattgttggattaattagtatcgtttatggcttttatgctaaaaatatatcttgaattgtgattttggtattgtgcttgcttggtattttcgtttcaccaagtagtactctgtttgcgttgtagaacagagacagacgaataaatatcgtgctttgattggtttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0282900, RefSeq:Os02g0282900