Os02g0301000

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0301000| Description = Zinc finger, CCCH-type domain containing protein| Version = NM_001053155.1 GI:115445680 GeneID:4329092| Length = 504...")
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Gene Name

Os02g0301000

Description

Zinc finger, CCCH-type domain containing protein

Version

NM_001053155.1 GI:115445680 GeneID:4329092

Length

5046 bp

Definition

Oryza sativa Japonica Group Os02g0301000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11607487..11612532

Sequence Coding Region

11607704..11608576,11612170..11612277

Expression

GEO Profiles:Os02g0301000

Genome Context

<gbrowseImage1> name=NC_008395:11607487..11612532 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:11607487..11612532 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacggcggcggcggcggggaggccgggtccggtggctcggcgccggtctgcagcttcgtgaggaagccgccgaagaacatccggaagcgcccgaccgcgcccgcgggctccgacgacgacgacgaagacgggtccggcgccatcgccgccgcgcgcgccaagaaggcgccgtcgtccaccagcaagctcttcttctcctccgcggacggctcgtcggagccccgccggttccagtacgagtcgtcgcggacgatccaggcctccaccgacagccgcgccaccgccacgctcgagacggagacggagttcgaccgcgacgcgcgcgccatccgcgagcggcagctcaagcaggccgaggagtccctgaagaagaacccctccgctcctgcctccagctccggctctggctccggggaggtgtacaaggggatccacggctacacggattacaaggccgggttccgccgggagcacacggtgtcgtcggagaaggccggcgggtcgcacgggccgctccgcgcgtcggcgcacatccggctctccgctcggttcgactaccagccggacatttgcaaggactacaaggagacagggtactgtggctatggcgattcctgcaagttcatgcatgacagaggggactacaagtctggatggcagatagagaaggagtgggaggaggcggagaaggcccgcaagcgccgcatcgctatgggtggggatggtagtgattacgaagcaggggaggaggatgacgatgatgatgaagaagcgttgccctttgcctgctacatttgcagggagccttttgttgatccagtggtcacgaaatgcaagcactatttctgcgagcactgtgcattaaagcatcactcgaagaataagaagtgctttgtctgcaacaaaccaacactcggcatcttcaacgcggcacaggagatccgcaagaagatggcacaagacaagaagcaatag</cdnaseq>

Protein Sequence

<aaseq>MADGGGGGEAGSGGSAPVCSFVRKPPKNIRKRPTAPAGSDDDDE DGSGAIAAARAKKAPSSTSKLFFSSADGSSEPRRFQYESSRTIQASTDSRATATLETE TEFDRDARAIRERQLKQAEESLKKNPSAPASSSGSGSGEVYKGIHGYTDYKAGFRREH TVSSEKAGGSHGPLRASAHIRLSARFDYQPDICKDYKETGYCGYGDSCKFMHDRGDYK SGWQIEKEWEEAEKARKRRIAMGGDGSDYEAGEEDDDDDEEALPFACYICREPFVDPV VTKCKHYFCEHCALKHHSKNKKCFVCNKPTLGIFNAAQEIRKKMAQDKKQ</aaseq>

Gene Sequence

<dnaseqindica>218..1090#4684..4791#aaacctaatctgatctgcctcctctccccacctcgacccgctccacctagggtttcagccatccccggcgtgccccatctccggcggctgcttccccgccgcgagcccgttctcggcagcggcttcccgttgcgcgcgcgtcccatcctcgccggcgcttaggcggcatcccgactcgcccccttgaaggaggagcccttagaacttgggcacctcgatggccgacggcggcggcggcggggaggccgggtccggtggctcggcgccggtctgcagcttcgtgaggaagccgccgaagaacatccggaagcgcccgaccgcgcccgcgggctccgacgacgacgacgaagacgggtccggcgccatcgccgccgcgcgcgccaagaaggcgccgtcgtccaccagcaagctcttcttctcctccgcggacggctcgtcggagccccgccggttccagtacgagtcgtcgcggacgatccaggcctccaccgacagccgcgccaccgccacgctcgagacggagacggagttcgaccgcgacgcgcgcgccatccgcgagcggcagctcaagcaggccgaggagtccctgaagaagaacccctccgctcctgcctccagctccggctctggctccggggaggtgtacaaggggatccacggctacacggattacaaggccgggttccgccgggagcacacggtgtcgtcggagaaggccggcgggtcgcacgggccgctccgcgcgtcggcgcacatccggctctccgctcggttcgactaccagccggacatttgcaaggactacaaggagacagggtactgtggctatggcgattcctgcaagttcatgcatgacagaggggactacaagtctggatggcagatagagaaggagtgggaggaggcggagaaggcccgcaagcgccgcatcgctatgggtggggatggtagtgattacgaagcaggggaggaggatgacgatgatgatgaagaagcgttgccctttgcctgctacatttgcagggagccttttgttgatccagtggtcacgaaatgcaagcactatttctgcgagcactgtgcattaaaggtatgcggcagtttattctgttttcattatatgcttatatttatgtttatgtttcagtctgttctgcattcactatttatcgataatcatgaatgccaactgacgaatatctcttgtagaggatcaaatgtaaccatttacttggctgtgttgatagttcagacttcagacacataatctaggaatgcttgcagaaacaagtgttagtctagagtctagactctagagtaaattagacaaaacggttagtttaatgaacgtagctcgagataaatctaggttttcttggctagcggtgcttataccataagattttggccatatggtttcacaagagcattgtgcattgtcagtgtcatgatggaggttagtgctgaaggttttggtgctttggtcccacaaagcagtggctcgaccagaataccagatagctcgacaacatctcatgcaggtggtggggactaatggagagagatgagaggtttggttatggtagttttctgaacctaactataaaaacctatgtataagtgttactgcaaacaaacaaaaatttatagttagaacttagaactgtagaagagaataaatgtgagtgggataagagaaggttttaccgctagaagcaagggcatagttttttttggagcagaaggagatttttcttgtattacatttgatgatagttaccggtctttggaagctactatgaaagtgtgtggtataacataaaattcttctttgacaaaattaaacccacttatgaggcaacttctgacatggattttttttatgaagaatatcaaatatgtatataaaaatcacgataaagtttagttactaacactaagtaattgatttatatcatgaaacaacgaaataccatgcaatcttgggtgttgttactttcgtggaacaaacactgaagataaatactacttcctccgtttcacaatgtaagactttctagcattgcccacattcatttagatgttaatgaatctagatatatgtatgtgtttagattcattaacatctatatgtatatggacaatgttagaaagtcttacattgtgaaacggagggagtaatgcaataccattttgtttctcattttgtggggaatagttctgaaaacttaggtggctcttcatttcttgtccaatgtatatgtatggtgttgattataaagaaagggtcccacttagcctcgtgttggcaagtttacagtttgtgacaactgatgcctcataaaaccagtggttaagtactagagaccacattttaacttgctattggaggatatgccactatttactcttatggctctatgtaacccacccacaactcatgatgcatcgattagtatagacatgagttttttgggggcttggtacagtaggtcttttttgtacatagactgccaatttgtgatgagtaccactacacaaagtaacctaacctttcatatactgtgagttggagaatttgtcttggatgtgaatattgggttagctgtagttctgttggctatgtggtacaatttataggcttgtttagttttgtacctaggttcttattatgaggttattctagatgcattctttgaaacaatagttttgtaagaatagcttcttcaggttatatctggtcatatttcccgtttagagatggcatgtgccacttgcttggggcaagggagatgactcgagaactgagtcagcacttgtgtgttaaaacagctgccatgccgaatggaaatcatgtctgggtgttattttacctatttgttcaagtgaattcagtgtcaaaactagacaatctgaatagttgaagggggtttacatgtgtaatgtatatcattgttggattctattccttctgtgatttactgctgctaggccttgtacctgtctcatcatcttgctgtgagcaagggtcaaactacagccatgaggcaaacaattagctatttccttgaacaagtccagctgcatcaatctttccaacctctagtcaactcttcactattgccagttattgctccagaagggacccattttcaggtcttggcttatcatcttatcaataatggcaagagaaagcatcagggaatgtctagcagctcttaaagccgaaaagaagcttaacttcttccataaaaggctagcaagggaaatgtctcctattgctcttggatcttatacatgttctacacgcacaggtcatgacacagaaagaatgaacgaatgtgcaggtttctgttagtggctagtaaagaaaggcagtgatgtatattcttatgttgatgaatctttctttaaagaattcactcctcatacatggtgcattgacttaggtggcaccgtgcacgttaagaatacttcatgcagatggcattatgtgatgactgtaagaggagtgtagcaaaatcttagcgtcgctaacagagcagagactcaagtcaagacagtccttcaacttgcatttaggagtcgactttagtcttttttcttggtgatgttctattcattcccattgttgaaataaacaagttatggccatccggagaaagactgggaacaaataaaacattgtctcctaatgcaagtggtgaagcaaaaactgccttaatttcaatctctgttccattggcgaccctaagatgtcactccccttttatggccctcacataacataatccatgtaaagaatttgtaatatccacagtggctcctgagtcaaattcaccatgaattaggggttaatttagtaaagagattcatcaacatatgaatttatttcattacccttcttagctagcttctgtttggaacctgcataacccttctgtatgtgtccttcctgctcgtagaacttgcacaacaaagttctaggagcagcatgatttagaggcattaaaattacttgtctctggcttaaggttgaaatgagggcttcttcttagctttagagctgctagactccttgatgctttctcttgccattgctgacaagatgagctttttccttctgtatctcaactttttgtgtatcttcttcgactgaactagtgaatgactaatgagctgctatggaccatttttctttctgaatgttgtgatcttatataaatgacatggactaagagataaaaaatggccatccatatcctttttaattaagtacttcctttttttaagccttgaaatgccaatggatccttctagtttattttatttgatgtgagttgtatgcagagtggaataacgctgaaaatttagatctttgtactgcttaacttggattagaacgtgacagtgaaaattgaatcaaccatgttaaaatacttttttttctagaacctgactttttcaattctttggtgcacattgctgtttatttagtattggattcatgaatttgattatgttgatcatttcttagtgtgtcagattgattattgtgttatgtgcaagttccgttgtgtcatttgagatgttgaaatacggttcagttgctcatgtttcatgcctcttatggcaaagaagattctgatgatttgtgtatgttttttgtgttattgttttcagcatcactcgaagaataagaagtgctttgtctgcaacaaaccaacactcggcatcttcaacgcggcacaggagatccgcaagaagatggcacaagacaagaagcaatagtgcccactgacagttgaagaatgtgacttgtacgttagagagttgaagaatctaaatgatgtggaattttagatgacaaagaaaactaccaattagttttgcattctgtttatgtaacaatatctgctagcctactctcacttgctcggttcagctcagccttttgtatggcaaatgtattgcttctgtgaggatgtgaattgtgcagagcccaaatagatgaggcaaacataaaaggttcttgatttccttatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0301000, RefSeq:Os02g0301000