Os02g0316200

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0316200| Description = Cyclin-like F-box domain containing protein| Version = NM_001053200.1 GI:115445770 GeneID:4329145| Length = 4527 bp|...")
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Gene Name

Os02g0316200

Description

Cyclin-like F-box domain containing protein

Version

NM_001053200.1 GI:115445770 GeneID:4329145

Length

4527 bp

Definition

Oryza sativa Japonica Group Os02g0316200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12557766..12562292

Sequence Coding Region

12557975..12558263,12561226..12562211

Expression

GEO Profiles:Os02g0316200

Genome Context

<gbrowseImage1> name=NC_008395:12557766..12562292 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12557766..12562292 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtcgtcgtcgtcgtcgtcgtccgccggccgccgcctcgccggaaacctaagcctgaggcctggcgtggcgtcgattatccctgggctgccggacgacgtggccgccgtcatcctctgcctgctcacgttccccgaccagtcccgactccgggccacctcccgcgcgtggcggctcctcctctcggcggccacgctcctcccgctccgccgcagcctgcggcttccgcggcgccacctcctgtgcctcttccccaccgacccctccctcgcctccccgatcctgctcgaccccgccgcgcccaccgcctggtggtccctcccgccgatcccgtgctcgccgcagcactacggcctcgccaacttcgccgcggtcgcggtcggcggccaaatctacgtcctcggcggctcccgcttcgacgcccggagctatcccctcgacaacccctccccctccgccgccgcctaccggctcgacctcgccctctcccgccaccgctgggagcgcctccccgacatgcgcgtcccgcgagggagcttcgcctgcgcccccgcgcccagcggcggagtcatcgtggccggaggtggctccaggcacccgacgttcccctcctacggcagccgcaccagcggcgtcgagttgtacgacgccgcagcgcgcgcgtggcgcgtcaccgcggcgatgcccagggaccgggccgggtgcgtggggttcgtcgcgcacggggcgggggatgggagggaggatgagttctgggtgatgggcgggtacgacggctacaccacggtggggggagtggtgcctagtgacgtatactgccgggacgcggtggcgctcgggctgtggagcggcaagtggagggagattggggacatgtgggaggaatgggagagagagcgccttgggccggtggctgtcatttctgctgaagatggaagggtcacagaggtgttcatgctcgatggtcatgatatcttcaggtataacttctcttcgaacagttggtcaaaggaagctacattgaggagaaagatcccaagtactcaatcatgtggtttcatagcaatgaatggcgaactttatgttcttacatctgcaaaactccctgtcgaaacctcaagtccatggaagcagtcgaagaagaggttggcgctggagtttcaagtttacaaccctgcagcaaagatgtggagggtgctcaccacacatccccctgttaacgtaccaattgatttcaggactgcagctctctgtacggttgagctgtag</cdnaseq>

Protein Sequence

<aaseq>MAASSSSSSSAGRRLAGNLSLRPGVASIIPGLPDDVAAVILCLL TFPDQSRLRATSRAWRLLLSAATLLPLRRSLRLPRRHLLCLFPTDPSLASPILLDPAA PTAWWSLPPIPCSPQHYGLANFAAVAVGGQIYVLGGSRFDARSYPLDNPSPSAAAYRL DLALSRHRWERLPDMRVPRGSFACAPAPSGGVIVAGGGSRHPTFPSYGSRTSGVELYD AAARAWRVTAAMPRDRAGCVGFVAHGAGDGREDEFWVMGGYDGYTTVGGVVPSDVYCR DAVALGLWSGKWREIGDMWEEWERERLGPVAVISAEDGRVTEVFMLDGHDIFRYNFSS NSWSKEATLRRKIPSTQSCGFIAMNGELYVLTSAKLPVETSSPWKQSKKRLALEFQVY NPAAKMWRVLTTHPPVNVPIDFRTAALCTVEL</aaseq>

Gene Sequence

<dnaseqindica>4030..4318#82..1067#ggcagagaggcgagagcatcgcgactcgaggccaatttcttccttcccctttccttttcgctcgcggcgcgaggcgatcggatggcggcgtcgtcgtcgtcgtcgtcgtccgccggccgccgcctcgccggaaacctaagcctgaggcctggcgtggcgtcgattatccctgggctgccggacgacgtggccgccgtcatcctctgcctgctcacgttccccgaccagtcccgactccgggccacctcccgcgcgtggcggctcctcctctcggcggccacgctcctcccgctccgccgcagcctgcggcttccgcggcgccacctcctgtgcctcttccccaccgacccctccctcgcctccccgatcctgctcgaccccgccgcgcccaccgcctggtggtccctcccgccgatcccgtgctcgccgcagcactacggcctcgccaacttcgccgcggtcgcggtcggcggccaaatctacgtcctcggcggctcccgcttcgacgcccggagctatcccctcgacaacccctccccctccgccgccgcctaccggctcgacctcgccctctcccgccaccgctgggagcgcctccccgacatgcgcgtcccgcgagggagcttcgcctgcgcccccgcgcccagcggcggagtcatcgtggccggaggtggctccaggcacccgacgttcccctcctacggcagccgcaccagcggcgtcgagttgtacgacgccgcagcgcgcgcgtggcgcgtcaccgcggcgatgcccagggaccgggccgggtgcgtggggttcgtcgcgcacggggcgggggatgggagggaggatgagttctgggtgatgggcgggtacgacggctacaccacggtggggggagtggtgcctagtgacgtatactgccgggacgcggtggcgctcgggctgtggagcggcaagtggagggagattggggacatgtgggaggaatgggagagagagcgccttgggccggtggctgtcatttctgctgaagatggaagggtcacagaggtgttcatgctcgatggtcatgatatcttcaggtcagggattttgttcttttgtctgcacaattgtttttgcatatatgtttgtgtctgcgagtagttcaatttcaatttcgtgtaattctttattcatgtgtgtttgcttgcttggaacgattggtaattaatacagttcccttttctacttgtagttgcataacatgtttagtacttttgttgcttcaatttcataatttaatttagctcaattattcactatatgatgagtttggagtcgggcaagggtgtttatttgttaatctttcttttctgcttggtgtcttggttctgtaattagttgattttgttaagatgtacaaatggatggaatgagaataatgggaaacaacactttttgtttgttccattttattgtttaggtgccaactattaagatgcagtactcagctgagtctctgacgaatttgatgtcattgctgccatacatttgatagactaataatgcagataccatgtttttagaatctggaaattaattttaagattgaagagcctagatatcttttgcttctcttccagtttcgtttacagagacgtttccttgccattcatgcatattactttcttgtgttacattacggagcagatctcatggaaaagcattgcttaacatttttattttcctcacccatctcttcaaccaaaataaaaactcacagcactaactaaaagataatgtccccaccctttggtcacttgattttaagcaagcatgagtgatgcgctgacgtgatgtactgagaacgaaccaaatataggtcttgctatgtggtctatttgtcttcatcctatggttgtcaataaagatgtttgtgtgtacaaaatttcagaaaaaataacatttgttttcaagaggcagagataaaacactcaacttttgaagtccagaggttgtaaatacaaatgatgaagttgaagctgtcttatttcagaggttttaaatgtaaagtacgttttgattggtttgttagtcaatggttggttttgtggaccttatctcagtagctgcttgttgctttcatgttaagaaaagggttttcatatgcatggtcaatatcatgattggagatgaaattttggtaaacatttgtatgcctgcaaccatgtacaagattcacttgttccatgcaatcatagacttgttattatggatatattttggaatgtaatggatacataatatcgagaaagtgttagcattaaattattatcaacataagggtgcaagtggccatgtactagtgatgtcattggttaaatatggacaggcaattgcgtgtttaactgagggcatttaattttgacatgctagataaacatcacaccagttcacatgattacagttaccacttgttagtttgtgaaatttgctgaatgaaatgacgttgtacactaatcaggcttcacttaacatgttctttaaataaataggtgtgcctacttatatcattagaaaccaaaaaaagtcattgtatcaactgccaaaaatttcagttagcttgcgtagtgttcacagtaccacttaactagtgggtaaaacatttgtaaagactgacatagtatcttctgctggacatcaaggccccaattagagaagatccatctggtcattaataacaaactttgctttatgattaacaaacttacattcggagggaatactgtagcaaaccctttccacataggtacataggattaagctagcagttagcgtgttacaagttccattttgagactagtcaccacttcctagttttggtattaaaatttacatcagatgcaattgagcaatttcatagcattagttggaaacaaatatcactcctgtgttgtgctttctaaatcatacctgaatgctgtcattttgtagccaccataattagctagaacgatcgggggaacttggtagatatgtttagatattatgaaaactatctgttcttaacttcttactatattttttaatacatgttttttttgttgccaaagttaagtgaaaaaccaacagttttttgttgccacaatgagctaaatgaactacatagagatgtatctgtgtactgcaagaggtatcagtgcgaatttctttgcattaatttttattgaaaattgactagtatttccgacattcactaggagcggtgatgtgcacccaagcaatcctaggatttggacccagccacccaagtggatggagttattaaatagcttcaccaccaggccattggggtgtatttctttgcattagtttatgtcaaagtaaatatatctcagagaactgtatgctgtgacattgccaatggggagtggcattgatatgtatccttgaggaaaagaggaagagaatttagataaattcataaatatcaaatagtgactgctttctgaatacatgcttagttattctgtatgcaagtttccatcacgagtacagctagtcaaagcctcatcgaagcttgtactgcatgtgttatcaactctattatacctatgttgagattaaactgtcttttatgtttgcatgagagattctgttaggagtccatggaactgatcttcatgctgacttgtataattaactacaagctgcgttgcacctaacactttgtttgctagttgttaagtgctggatgttttctaacagttgaggtactctcctcaaggaccacggaaaagctcaagttataactgaaatatgtatatccattatgttctgatttttgaacaaactggtagctattgatgagaaacttgtaattatgaactttactgtttcgtagagcgcatggtagctcttttgcaattctgatcacaaatcatacttgatacttatactatgattgctatgttatctggaatctataaccattttcttctggcttggttactaaaaattttgcgcatataaccagactctaatagtcatgtcttggtgcaggtataacttctcttcgaacagttggtcaaaggaagctacattgaggagaaagatcccaagtactcaatcatgtggtttcatagcaatgaatggcgaactttatgttcttacatctgcaaaactccctgtcgaaacctcaagtccatggaagcagtcgaagaagaggttggcgctggagtttcaagtttacaaccctgcagcaaagatgtggagggtgctcaccacacatccccctgttaacgtaccaattgatttcaggactgcagctctctgtacggttgagctgtaggtttcttgatgatcaccattcactgtacagattaaggtagttgatcagacatttgattgcaaatttagatgtaaatgagaacaccatccaatgatgtcagcaaataggcgaagattgttgcgctcgtgagtgctttgcattggtagcttgtgtgtatatgtacaggatgggacattgcacattatctaataaaaaggacggtacattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0316200, RefSeq:Os02g0316200