Os02g0319800

From RiceWiki
Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0319800| Description = WD40-like domain containing protein| Version = NM_001053217.1 GI:115445804 GeneID:4329163| Length = 4922 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0319800

Description

WD40-like domain containing protein

Version

NM_001053217.1 GI:115445804 GeneID:4329163

Length

4922 bp

Definition

Oryza sativa Japonica Group Os02g0319800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12770611..12775532

Sequence Coding Region

12770633..12771004,12771752..12772236,12774284..12774445,12774960..12775296

Expression

GEO Profiles:Os02g0319800

Genome Context

<gbrowseImage1> name=NC_008395:12770611..12775532 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12770611..12775532 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcttctctccgcggcctacggtgccacctccgacgacgacgacgacggcgccgaggccacccctactccaggctgggccgcgacgggctacgcctccgccgctggacctccaccgaagcggccgcggtgggagcctccaccatacctcccaccacctcctccataccccatccctcaaccggccaggccacgcgccgcgccgccgcctgctagcaccgctagcggcaggtacgtctccaaaagggagcgggccctaatggccgcgtcgagctctcccgtggattcctcgtcaccgcttcctccatcggcggcagctcagtttggttctcctgttgttggatctatctctgattcaaatttgcgagctgatatttttcattctttacgatgccaaacaaaacctggatcaaccaggaggatgcctttgaagctctcagtctctttgacgggtcacaccaaagcagtcaattgtgtagattggtcacaaagtcatgcacatcttctcgcttctgctggaatggaccatacaattcatgtatttaatgtatggaataaaggaaatactactgctcgtgttttcaaatttcataccgctgctgtgaaggatgtgaggtggtcccttaatgggctctctttgctttctggcggatttgattgctccttacggttagttgatgttgaggaagggaaagaaattaaggtgttcaaggaggatcaggctgtggaggtcatcaagttcaatccaagtaactccaacctgttcctgtctggtgggtccaagggttctcttagactatgggatattcggagtggtttggtgactaaagaatatcaaagaaatcttggcaccatccttgacattgaattcagttctgatgggaaacagtttatctgttcaacagacacatccagaagtaatgttagtgagaattctataattatatgggataccctgcgacaagttcctttatctaaccaggtttatacagaagcatatacctgtccttgtgtaagatatcacccatttgaagcttcttttgttgctcaatccaacggtaactacattgcaatcttttcagcaaagtcaccattcaagctaaacaagtatatgcggtatgaaggacatggagtgtggggtttcccgataaagtgcaatttttcatttagcgggaaggaacttacatctggttcatccgatggttgtatctatttttacgattataaatcgtcgagacttttgagtaaaatacaggcatttaaagaaccatgtactgacgttgcataccacccagtaattcccaatgtgattgcttcatgtagctgggctggtgaaatagctgtttttgaatga</cdnaseq>

Protein Sequence

<aaseq>MDLLSAAYGATSDDDDDGAEATPTPGWAATGYASAAGPPPKRPR WEPPPYLPPPPPYPIPQPARPRAAPPPASTASGRYVSKRERALMAASSSPVDSSSPLP PSAAAQFGSPVVGSISDSNLRADIFHSLRCQTKPGSTRRMPLKLSVSLTGHTKAVNCV DWSQSHAHLLASAGMDHTIHVFNVWNKGNTTARVFKFHTAAVKDVRWSLNGLSLLSGG FDCSLRLVDVEEGKEIKVFKEDQAVEVIKFNPSNSNLFLSGGSKGSLRLWDIRSGLVT KEYQRNLGTILDIEFSSDGKQFICSTDTSRSNVSENSIIIWDTLRQVPLSNQVYTEAY TCPCVRYHPFEASFVAQSNGNYIAIFSAKSPFKLNKYMRYEGHGVWGFPIKCNFSFSG KELTSGSSDGCIYFYDYKSSRLLSKIQAFKEPCTDVAYHPVIPNVIASCSWAGEIAVF E</aaseq>

Gene Sequence

<dnaseqindica>4529..4900#3297..3781#1088..1249#237..573#gctgctgcctacagcgccaccgccggttcccccgcatcgcggtcgtcggctctcccctcccccatccgctcctcctccatatcccccacccaccctgtcgcctccttccatttcgcctcgcttcgccctcgccatcccctctccgcaccgcgcacgcgcctctccttccacctccccgcgcccaaacacacgcgtgggccgctcgccgtgtcttcgcactgaaaccctagtcgccgatggatcttctctccgcggcctacggtgccacctccgacgacgacgacgacggcgccgaggccacccctactccaggctgggccgcgacgggctacgcctccgccgctggacctccaccgaagcggccgcggtgggagcctccaccatacctcccaccacctcctccataccccatccctcaaccggccaggccacgcgccgcgccgccgcctgctagcaccgctagcggcaggtacgtctccaaaagggagcgggccctaatggccgcgtcgagctctcccgtggattcctcgtcaccgcttcctccatcggcggcagctcagtttggttctcctggtgaggatctttggcccatgattgcaaaggatacaatacgataagctaccctttcacccctcttgtgttcttgcccatgaactgatctgttgtagtaaaagtccatcatctgaatgccaattttggattgggcgtgattagctgcatagattggtaacaggggttcaccatatgttcaactgagtttttcaggagattattgtgtcatcaatctcaaggcaaactgacttaaaacaatataagagatcttaaatgcagttgatcttgtttatctcgatttctaagaaggcttaacctgaaaccataatgtagatacctgtggtgacattttgggcaaatgccaattgaaattctgccataaaccaaagtcctattttatacttaatactgcagttgatctattatcattgatgatgggtttagggctttaagaagttaaacacgtataatttatttttttcccttgaaaggtttttgtatgacttgctcatgtgttctgtacattttgttccagttgttggatctatctctgattcaaatttgcgagctgatatttttcattctttacgatgccaaacaaaacctggatcaaccaggaggatgcctttgaagctctcagtctctttgacgggtcacaccaaagcagtcaattgtgtagattggtcacaaagtcatggtcagtatttattattttacagtttcacgtctcagttttacttatatttatcaaaagtaaatatacacttaagacatctctcagttctaggacttctgcattagaatatgttggaaaaatgttggaatctttcattctggcttctgggacaataagatgttttaacttttgaggtccggacaatttaatataaaaacatttcataacttttgtgataagtgataaccactaataatgcatgtgcacttcatgccatggtattgacttttgcaaagttaatggtatggttatggtgaataatgtctataattttaccaccaaagtaatttctatatctaagaaaacaccaatattttcttctttgaaacatgagtatgaactttccaacttgcttgacaaactttctggggtcaatgttgatgtttttaatagtgtatctggtcttaaagtagtagatgtgcacaaaaactaatcaaactcttgtgtcagttaggatgcttttgtatttcttttctctttggtaatactgttggtctgagaggactaaaccatttcacagcttaaaaacgtttgcttttttaactggagagatatgaatgttttgaaaacctatatacattgacactgttaattgttaaccccacatgctcttcgtgtttgattttgtacagcttctgaatgttttaaataatgtgcagcttagtaggtatttagcacaagtgacatttaagaaattgtaaattacacataacttccaagcacgtgtatatgtatcatttggatgcatggtcttggttccaatcaatattttttttgagatgagatgaaaccttggctcagtcataactgccagttaaccacatgatagataggtaaattcatggataattgttttcttatatttgtaggatgttcactgttggacaaagtatacaaagtaaacaaagagaagatagggacaatgtacttattatcttttctaataacaaatacaaatcttaacaattgtgcactccataacctacagatggtgatccatctctagtgatgtggtctcctggtttctggagtcccaagggacttctgatcaattatctatgtaggtcaagcttgctatagaacctccaattaagctggggtagtggtcatatagtttggtctttttttcatgcgctctcccaaaatgtagtgagtgggaggagtagatgtttatagggtgctagcattgtctactgtctcgctggtctgtgcatggtgtagccttcgtgtcagctccatcttcccttgccctcctgccttgttagactcgaatgatgtgtatgtgtagattgctgattgttacacaaatactcttgttatacagatttttttagaggtgttatacatatatcagaagtaaatattagtttcgtgttgcttaaggtgatagctatagtaatacttttttcctttgtatgtctgttgttttatattaaggtgttcactcctaatgattacatctaaaagagatgcaccatccatgggatgagttgaaggcaactttcatctccataaattgtgtatgctaacaaaagaaatattacttcatctacactttgtatatagttggtacccactaacaattattagaagctaaatctcaacatgcaagcatgccacatcatcacccactagcaattactattctagcccatttaaaatcccatgcaagcatgccacatcttcactcactagcaattactatttagcctattttaaatcccatgcaagaatgacacatcatctacaatattatattatagagatcgacaagtatgtgtcaaatcatcttcctcacattattttctcaacatttcaacttttatcatttcgacaatatttaacatatacttatccatgaatcccgcaacaaagcgcggggtatcacctagttttttagatgaagactcctttacatacggaatacgcaatatgattatgcatagtatttttaataaattattagaatattaagtcagtaaaaactcacaaggaagaacatttacagcacatcttctcgcttctgctggaatggaccatacaattcatgtatttaatgtatggaataaaggaaatactactgctcgtgttttcaaatttcataccgctgctgtgaaggatgtgaggtggtcccttaatgggctctctttgctttctggcggatttgattgctccttacggttagttgatgttgaggaagggaaagaaattaaggtgttcaaggaggatcaggctgtggaggtcatcaagttcaatccaagtaactccaacctgttcctgtctggtgggtccaagggttctcttagactatgggatattcggagtggtttggtgactaaagaatatcaaagaaatcttggcaccatccttgacattgaattcagttctgatgggaaacagtttatctgttcaacagacacatccagaagtaatgttagtgagaattctataattatatgggataccctgcgacaagttcctttatctaaccaggtaataggttactaatttatattgataactatttgtacatagcaaattatcttcttttcactgaggatcttttcccattcttattcatatgtatgcatacttcagcagtttgaaaaacagaagagatatttatccttaatttagtaagcaatttgattacttgctaatcatgcatgtctctgattgctcatgtaagcttcacttgaattactctgttatgatagctatagcttcaaatatagaagttcaagatgtacactagcgaggaagtatgactttatctgtgcatatgaaggtggagcatgttgaattttgttcaatacccttttttatagttttaatatgccatggtgccttgcttgatgttgcttcatattcattccataacaaaaccagttccattttgttccccaaattcttatagatgcctgatatgttggtatgcgtgtctcactggtatggaaatgtgtactactccgtaatactttatgggctaatgtttatgatgaatttgtcaacttacagttatgataatcatgctaatatgctatttgctctgcatactaataatttattacttgaaatcaagaaggtatgctgtcgtgttgattagaaagcacttttcaatattgacaactttgaattagagaataatatttcgaactaacaaatattaaaaaaggtttatacagaagtgtaaacactgaatgcactgaagcttgacacaaatggcattctgtatggcaggtttatacagaagcatatacctgtccttgtgtaagatatcacccatttgaagcttcttttgttgctcaatccaacggtaactacattgcaatcttttcagcaaagtcaccattcaagctaaacaagtatatgcggtatgaaggacatggagtgtggggtttcccgataaagtgcaatttttcatttagcgggaaggaacttacatctggttcatccgatggttgtatctatttttacgattataaatcgtcgagacttttgagtaaaatacaggcatttaaagaaccatgtactgacgttgcataccacccagtaattcccaatgtgattgcttcatgtagctgggctggtgaaatagctgtttttgaatgacacaataaaggttgtttatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0319800, RefSeq:Os02g0319800