Os02g0325100

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Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0325100| Description = Similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7)| Ve...")
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Gene Name

Os02g0325100

Description

Similar to 26S protease regulatory subunit 6B (MIP224) (MB67 interacting protein) (TAT-binding protein-7) (TBP-7)

Version

NM_001053235.1 GI:115445840 GeneID:4329182

Length

4585 bp

Definition

Oryza sativa Japonica Group Os02g0325100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13088146..13092730

Sequence Coding Region

13088193..13088690,13089252..13089482,13089983..13090141,13090383..13090535,13091519..13091602
,13092387..13092521

Expression

GEO Profiles:Os02g0325100

Genome Context

<gbrowseImage1> name=NC_008395:13088146..13092730 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:13088146..13092730 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgaccgccgccaccgccccgccgcccgccgcggtcctcccggcggctcccccgccgtcctaccccgccacctccgcgccctccgcctccgcggccgccgccgaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtcgagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggagatggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcggatcctgagcaccatcaaccgcgagctgctcaagccctcggcgtccgtggcgctgcaccgccactcgaatgcgctcgtcgacgtgctgccgcccgaggcggactccagcatctctctgctcggatcatcggagaagcccaacgtcacttatacggatattggaggatgtgacatccaaaaacaagaaattcgggaggctgttgaattaccgctgacacatcatgagctgtacaagcagattggtattgatcctccaagaggtgtgcttctgtatggtccacctggaactggcaaaactatgctcgccaaagctgtggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagtacctgggtgagggacctaggatggttcgagatgtattccgtttggctaaagagaatgccccagctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagactggtgctgaccgagaagttcagcgtattcttatggaactactcaatcagatggatggatttgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccctgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcggcagaagaggcttgttttccaagtctgtactgctaaaatgaacttgagtgatgaggttgatttggaagattatgtttccagaccagataaaattagtgctgctgatattgctgctatctgtcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatga</cdnaseq>

Protein Sequence

<aaseq>MSTAATAPPPAAVLPAAPPPSYPATSAPSASAAAAEDDDDLYGR LKSLQRHMEFVEIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNG IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEK PNVTYTDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAK AVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF DAQTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEF PLPDRRQKRLVFQVCTAKMNLSDEVDLEDYVSRPDKISAADIAAICQEAGMHAVRKNR YVILPKDFEKGYRTNVKKPETDFDFYK</aaseq>

Gene Sequence

<dnaseqindica>48..545#1107..1337#1838..1996#2238..2390#3374..3457#4242..4376#gtccccaaacccgagcacgccaccgagccctaaccctagcctccgcgatgtcgaccgccgccaccgccccgccgcccgccgcggtcctcccggcggctcccccgccgtcctaccccgccacctccgcgccctccgcctccgcggccgccgccgaggacgacgacgacctctacggccgcctcaagtcgctccagcgccacatggagttcgtcgagatacaggaggagtacgtcaaggacgagcagaagaacctgaagcgcgagctgctgcgcgcgcaggaggaggtgaagcggatccagtccgttcccctcgtgatcggccagttcatggagatggtcgacggcaacaacggaatcgtcggatccaccaccgggagcaactattatgtgcggatcctgagcaccatcaaccgcgagctgctcaagccctcggcgtccgtggcgctgcaccgccactcgaatgcgctcgtcgacgtgctgccgcccgaggcggactccagcatctctctgctcggatcatcggagaagcccaacgtcacttatacggtcagttttctgctggattttttctgatccgcgtgaaccttatgttgatttatctgttctagatctgcctgtaaagtgccatgtttctagttaatttaatttttcgaagtataattttgcatccgggagatttactttcacacgagattctttctgaagcccgccgggatcagtttcccaacattttgccagttaggcagaaagttggaattttagatattttctgatagttgagtgcaatggggatctgaattttgctctaccagtatacagtttattgcataacatgaagccttggaatcgtaataaggacatggttgggcttttgtctgtatatgaacatttcgacaattggattaaacatctatctgcctaagctatcgctgtttaactattgattggctatcgaagttaaccaatattgacttatgaccactaactgtgcataatgtgatacaatcctcacatatcctggagcttatttattattgctcactgtaatctattcatacagtcgacaaataaaatatttaacatttttttgcttctgactattttcaggatattggaggatgtgacatccaaaaacaagaaattcgggaggctgttgaattaccgctgacacatcatgagctgtacaagcagattggtattgatcctccaagaggtgtgcttctgtatggtccacctggaactggcaaaactatgctcgccaaagctgtggcacaccacactactgctgcatttatcagagttgttggttcagagtttgtgcagaagtacctgggtgaggtatgttaggaccagtttatgtatatatattaataacttagctcactcgttacatcttgttcgctgaaataacaaatctagccttatacttaaaaggttcaactgcataatgtttgaactgctgtgctactgaatactaagaaggaatgtgttaaggattagttctgctcaaatgttaaggataagttaatcgaaataggctaatcatttttagctgaagaattatggggaactttgatagtgctagtaaatatctagcttgcccatgctgtgtattcatttgaacaattcctattttttgtctgaatattctttggaaacaatctttttgaccatcaatgacaactccaaattaaccaagtctttgtgcttcatgctcaataatagtatgcataagtttgctttatgttttggatgttgagacttcgtttgtagattttctatggtttttgggcatactagttcttttcttgatgaagttcttttattcatttgtttagggacctaggatggttcgagatgtattccgtttggctaaagagaatgccccagctatcatattcatcgatgaggttgatgctatagcaactgctcgttttgatgctcagactggtgctgaccgagaagttcagcgtattcttatggaactactcaatcaggtaaggtttattgttgtaggatatctgtaagatacttgtggagaaactgaatatttgttgcttgttaaatttgaatagctcagccatacccatacatttaagtagttgaagctcaagtgacttgaaatacatagtcaaacaagggatttacacagatattgtcgagaatattttatgaaattcctatgcttgaaggttgaagtatttctcaccatgtgtttttttaaaatgtcgaatgcagatggatggatttgatcaaacagtgaatgtgaaggttataatggcgaccaacagggcggataccctagaccctgctctgttacgtccaggtagattggacaggaaaatcgagttccctcttccagatcgtcggcagaagaggcttgttttccaagtaagttttgtttttttttccccaaaatgtgtgtccttcgcaggatattactgactgatgggtattgtttggtagagctttatattgaaggttaagtttctatattgttgatgggtattgtttctttcttgttctttacatgtagccactgttaggagtctatattggttcgtgacttttttttagttatgcttgtttaacatagtttgatcggaggggcagaatctttctgttgcacagccaattatttgtgttgcatttgttggggataaatcaacagtagcatctgataatactaacaataaagtagtgagttggtctgtactgcatctgttgatgctcatttttccacaagagtgcacaattattgtaggctcaatatcttgctccctccatctgcttttgatagtcatatttccaaatctgaaaaatttatttttgataggcatatttcaatccaacaacctatcctcttaatgactttctcggatttaatgcgtgactctccattctttctttgatagtcatatttccaaatctgaaaaatttatttttgataggcatatttcaatccaacaatctatcctcttaatgactttctcggatttaatgcgtgactctccattctttcacacaagattggctacatgggcatcgagaaatgcaaatattaatgatttgcttgtttatgaggaataacaagtagcatgtttaaatggatgataagtagaattacttatccttggtctgtgtgccaagatgaaatatgactatcaaaagaagatggagggagtatatgacttggtttgcctgtaatttgcataataagtttacattatatccttctgaacatttgttatttattatttatattcttgtttgtaattcatctgtttatgatttttataactgatgaaattattggttgctagatcctttctgagattatattcttatttggtaattgatctctctatttccaggtctgtactgctaaaatgaacttgagtgatgaggttgatttggaagattatgtttccagaccagataaaattagtgctgctgatgtgagtatcattccattttgatcttcatattacatctatcataacataataatatatcaatctgcatttgtaccactagagcataactagaggattgccggttgatctgttgcttaacatggccattttttgactaatgcatagcccatgtctgaggactgtagtgcagaagatacttttgatgccattgtaacttgtggcacatctgtgctggttaaaattttaatgccgtgctccctgctcctaatccataacagtaaaattgaaatatcactgtataaaactagaggatattttgacataaatattgcatactccctgctaatgtaatttcgttatcaacagttatggcatcagagtttcagcttgttactgtgctttatttttatcttgctgtaacttccaattttaagttaataacatcaaaatctaagatatatgtttcccctcgagaaccttccaaatcttagggttctattttattcattacatgactgtagtttaccacacctttttttttattttcattatgtgaaagtaccacctctaatagattacctttatatgttctaataatttttgtaaccctagaggttccttaaagccttgttcatcatcaaacttttcttttcatttgtaattctgtgctttggcataaatgttgctggcagctacacatgcacatttactctctgctcagcttttgctcaataaatactgtaagcatttatattcgctttcccttgtgctgttctgaaattcattgtgatgttctgtttttcagattgctgctatctgtcaagaagctggtatgcatgctgtgcgcaaaaatcggtatgttatcctccccaaggacttcgagaagggttaccgaaccaatgtcaagaagcctgagactgactttgacttctacaaatgaggcaacatattgttgaactgcatgcttgttcccctccggagctatcattaacattaaagatgatttcctggatagtcgcctcagcgatatttagtttatgtacctagaggctcgtcagtgccccaatctgttttatcaggtctgtaatttcaatttgtgcttgtacttgctggaaaatagaaaggtttgcacggtcaatccttttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0325100, RefSeq:Os02g0325100